RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 PRAM1Q96QH2 718 aa20.18■□□□□ 0.82
DDX41-212ENST00000511040 PHLPP1O60346 1717 aa20.16■□□□□ 0.82
DDX41-212ENST00000511040 SIRT1Q96EB6 747 aa20.16■□□□□ 0.82
DDX41-212ENST00000511040 POGKQ9P215 609 aa20.16■□□□□ 0.82
DDX41-212ENST00000511040 NUTM2FA1L443 756 aa20.15■□□□□ 0.82
DDX41-212ENST00000511040 C1orf167Q5SNV9 1468 aa20.15■□□□□ 0.82
DDX41-212ENST00000511040 NBPF1Q3BBV0 1214 aa20.14■□□□□ 0.81
DDX41-212ENST00000511040 CDC42BPGQ6DT37 1551 aa20.13■□□□□ 0.81
DDX41-212ENST00000511040 DLC1Q96QB1 1528 aa20.13■□□□□ 0.81
DDX41-212ENST00000511040 DDX17Q92841 729 aaKnown RBP20.13■□□□□ 0.81
DDX41-212ENST00000511040 ORAI2Q96SN7 254 aa20.12■□□□□ 0.81
DDX41-212ENST00000511040 DISP3Q9P2K9 1392 aa20.11■□□□□ 0.81
DDX41-212ENST00000511040 KIAA1210Q9ULL0 1709 aa20.1■□□□□ 0.81
DDX41-212ENST00000511040 AHDC1Q5TGY3 1603 aaPredicted RBP20.1■□□□□ 0.81
DDX41-212ENST00000511040 COL16A1Q07092 1604 aaPredicted RBP20.09■□□□□ 0.81
DDX41-212ENST00000511040 MINK1Q8N4C8 1332 aaPredicted RBP20.09■□□□□ 0.81
DDX41-212ENST00000511040 HIRIP3Q9BW71 556 aaPredicted RBP20.09■□□□□ 0.81
DDX41-212ENST00000511040 ESCO1Q5FWF5 840 aa20.08■□□□□ 0.81
DDX41-212ENST00000511040 MED1Q15648 1581 aaPredicted RBP20.08■□□□□ 0.8
DDX41-212ENST00000511040 TONSLQ96HA7 1378 aa20.08■□□□□ 0.8
DDX41-212ENST00000511040 ARHGEF28Q8N1W1 1705 aaKnown RBP20.07■□□□□ 0.8
DDX41-212ENST00000511040 FMN2Q9NZ56 1722 aa20.07■□□□□ 0.8
DDX41-212ENST00000511040 NHSL1Q5SYE7 1610 aa20.05■□□□□ 0.8
DDX41-212ENST00000511040 NBPF8Q3BBV2 869 aa20.05■□□□□ 0.8
DDX41-212ENST00000511040 JCADQ9P266 1359 aa20.04■□□□□ 0.8
DDX41-212ENST00000511040 TRPM1Q7Z4N2 1603 aa20.03■□□□□ 0.8
DDX41-212ENST00000511040 ADGRB2O60241 1585 aa20.01■□□□□ 0.79
DDX41-212ENST00000511040 XPCQ01831 940 aaPredicted RBP20.01■□□□□ 0.79
DDX41-212ENST00000511040 RGPD8O14715 1765 aaPredicted RBP20■□□□□ 0.79
DDX41-212ENST00000511040 ROCK2O75116 1388 aaKnown RBP20■□□□□ 0.79
DDX41-212ENST00000511040 FOXO3O43524 673 aa20■□□□□ 0.79
DDX41-212ENST00000511040 WASLO00401 505 aaPredicted RBP19.98■□□□□ 0.79
DDX41-212ENST00000511040 PHF23Q9BUL5 403 aaPredicted RBP19.98■□□□□ 0.79
DDX41-212ENST00000511040 LRRC59Q96AG4 307 aaKnown RBP19.97■□□□□ 0.79
DDX41-212ENST00000511040 USP32Q8NFA0 1604 aa19.97■□□□□ 0.79
DDX41-212ENST00000511040 SOS2Q07890 1332 aaPredicted RBP19.97■□□□□ 0.79
DDX41-212ENST00000511040 NUTM2BA6NNL0 878 aaPredicted RBP19.96■□□□□ 0.79
DDX41-212ENST00000511040 NUTM2EB1AL46 878 aaPredicted RBP19.96■□□□□ 0.79
DDX41-212ENST00000511040 NUTM2AQ8IVF1 878 aaPredicted RBP19.96■□□□□ 0.79
DDX41-212ENST00000511040 PHF8Q9UPP1 1060 aa19.96■□□□□ 0.79
DDX41-212ENST00000511040 SHPRHQ149N8 1683 aa19.96■□□□□ 0.79
DDX41-212ENST00000511040 NPHP3Q7Z494 1330 aa19.96■□□□□ 0.79
DDX41-212ENST00000511040 PRR36Q9H6K5 1346 aa19.96■□□□□ 0.79
DDX41-212ENST00000511040 CENPJQ9HC77 1338 aaPredicted RBP19.96■□□□□ 0.79
DDX41-212ENST00000511040 CCER1Q8TC90 406 aaPredicted RBP19.95■□□□□ 0.78
DDX41-212ENST00000511040 ANKARQ7Z5J8 1434 aa19.94■□□□□ 0.78
DDX41-212ENST00000511040 PMFBP1Q8TBY8 1022 aa19.94■□□□□ 0.78
DDX41-212ENST00000511040 CDK19Q9BWU1 502 aa19.94■□□□□ 0.78
DDX41-212ENST00000511040 LRP6O75581 1613 aa19.94■□□□□ 0.78
DDX41-212ENST00000511040 PNPLA6Q8IY17 1366 aa19.94■□□□□ 0.78
DDX41-212ENST00000511040 KIF1AQ12756 1690 aa19.94■□□□□ 0.78
DDX41-212ENST00000511040 PXDNQ92626 1479 aa19.93■□□□□ 0.78
DDX41-212ENST00000511040 TULP4Q9NRJ4 1543 aa19.93■□□□□ 0.78
DDX41-212ENST00000511040 SPATA31A6Q5VVP1 1343 aa19.93■□□□□ 0.78
DDX41-212ENST00000511040 EIF3AQ14152 1382 aaKnown RBP19.93■□□□□ 0.78
DDX41-212ENST00000511040 QRICH2Q9H0J4 1663 aa19.92■□□□□ 0.78
DDX41-212ENST00000511040 MEX3CQ5U5Q3 659 aaKnown RBP19.91■□□□□ 0.78
DDX41-212ENST00000511040 KRT28Q7Z3Y7 464 aa19.91■□□□□ 0.78
DDX41-212ENST00000511040 CARD11Q9BXL7 1154 aa19.91■□□□□ 0.78
DDX41-212ENST00000511040 RALGAPBQ86X10 1494 aa19.91■□□□□ 0.78
DDX41-212ENST00000511040 NUDT16Q96DE0 195 aaKnown RBP19.9■□□□□ 0.78
DDX41-212ENST00000511040 GPRASP1Q5JY77 1395 aa19.9■□□□□ 0.78
DDX41-212ENST00000511040 CLSPNQ9HAW4 1339 aa19.89■□□□□ 0.77
DDX41-212ENST00000511040 PSME1Q06323 249 aa19.88■□□□□ 0.77
DDX41-212ENST00000511040 RGS17Q9UGC6 210 aaPredicted RBP19.88■□□□□ 0.77
DDX41-212ENST00000511040 ATP7BP35670 1465 aa19.87■□□□□ 0.77
DDX41-212ENST00000511040 SRPK2P78362 688 aaKnown RBP19.87■□□□□ 0.77
DDX41-212ENST00000511040 CABP2Q9NPB3 220 aa19.87■□□□□ 0.77
DDX41-212ENST00000511040 PLEKHG5O94827 1062 aa19.85■□□□□ 0.77
DDX41-212ENST00000511040 NGDNQ8NEJ9 315 aaKnown RBP19.85■□□□□ 0.77
DDX41-212ENST00000511040 SPATA31A3Q5VYP0 1347 aa19.84■□□□□ 0.77
DDX41-212ENST00000511040 ADAMTS2O95450 1211 aa19.84■□□□□ 0.77
DDX41-212ENST00000511040 ITSN1Q15811 1721 aa19.83■□□□□ 0.77
DDX41-212ENST00000511040 LMOD2Q6P5Q4 547 aa19.83■□□□□ 0.77
DDX41-212ENST00000511040 CCDC61Q9Y6R9 512 aa19.82■□□□□ 0.76
DDX41-212ENST00000511040 EVC2Q86UK5 1308 aa19.81■□□□□ 0.76
DDX41-212ENST00000511040 COL22A1Q8NFW1 1626 aaPredicted RBP19.81■□□□□ 0.76
DDX41-212ENST00000511040 C8orf37Q96NL8 207 aa19.81■□□□□ 0.76
DDX41-212ENST00000511040 TNS3Q68CZ2 1445 aa19.81■□□□□ 0.76
DDX41-212ENST00000511040 SBNO1A3KN83 1393 aa19.81■□□□□ 0.76
DDX41-212ENST00000511040 TOPAZ1Q8N9V7 1692 aa19.81■□□□□ 0.76
DDX41-212ENST00000511040 POTEAQ6S8J7 498 aa19.8■□□□□ 0.76
DDX41-212ENST00000511040 TIMELESSQ9UNS1 1208 aa19.79■□□□□ 0.76
DDX41-212ENST00000511040 ACEP12821 1306 aa19.78■□□□□ 0.76
DDX41-212ENST00000511040 PPIP5K1Q6PFW1 1433 aa19.78■□□□□ 0.76
DDX41-212ENST00000511040 PAK3O75914 559 aaPredicted RBP19.78■□□□□ 0.76
DDX41-212ENST00000511040 TRPM3Q9HCF6 1732 aaPredicted RBP19.78■□□□□ 0.76
DDX41-212ENST00000511040 PLEKHG3A1L390 1219 aa19.77■□□□□ 0.76
DDX41-212ENST00000511040 CABLES1Q8TDN4 633 aa19.77■□□□□ 0.76
DDX41-212ENST00000511040 AFF2P51816 1311 aa19.76■□□□□ 0.75
DDX41-212ENST00000511040 CABP1Q9NZU7 370 aa19.76■□□□□ 0.75
DDX41-212ENST00000511040 POLR3AO14802 1390 aaPredicted RBP19.75■□□□□ 0.75
DDX41-212ENST00000511040 ST20-MTHFSA0A0A6YYL1 179 aa19.75■□□□□ 0.75
DDX41-212ENST00000511040 NGLY1Q96IV0 654 aa19.75■□□□□ 0.75
DDX41-212ENST00000511040 ARHGEF10O15013 1369 aa19.74■□□□□ 0.75
DDX41-212ENST00000511040 HAP1P54257 671 aaPredicted RBP19.74■□□□□ 0.75
DDX41-212ENST00000511040 SBNO2Q9Y2G9 1366 aa19.73■□□□□ 0.75
DDX41-212ENST00000511040 USP47Q96K76 1375 aa19.72■□□□□ 0.75
DDX41-212ENST00000511040 ALS2Q96Q42 1657 aa19.72■□□□□ 0.75
DDX41-212ENST00000511040 ZNF772Q68DY9 489 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms