RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 MRE11P49959 708 aa18.53■□□□□ 0.56
USP38-202ENST00000510377 NSD3Q9BZ95 1437 aa18.53■□□□□ 0.56
USP38-202ENST00000510377 ATP10BO94823 1461 aa18.53■□□□□ 0.56
USP38-202ENST00000510377 DISP1Q96F81 1524 aa18.53■□□□□ 0.56
USP38-202ENST00000510377 DIAPH1O60610 1272 aaKnown RBP18.52■□□□□ 0.56
USP38-202ENST00000510377 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
USP38-202ENST00000510377 RAPGEF3O95398 923 aa18.52■□□□□ 0.56
USP38-202ENST00000510377 PANK2Q9BZ23 570 aa18.52■□□□□ 0.56
USP38-202ENST00000510377 SLC4A10Q6U841 1118 aa18.51■□□□□ 0.55
USP38-202ENST00000510377 FAM135AQ9P2D6 1515 aa18.51■□□□□ 0.55
USP38-202ENST00000510377 WDR63Q8IWG1 891 aa18.51■□□□□ 0.55
USP38-202ENST00000510377 KIAA0556O60303 1618 aa18.51■□□□□ 0.55
USP38-202ENST00000510377 STAC3Q96MF2 364 aa18.51■□□□□ 0.55
USP38-202ENST00000510377 KDM5CP41229 1560 aa18.5■□□□□ 0.55
USP38-202ENST00000510377 ATF7IPQ6VMQ6 1270 aa18.5■□□□□ 0.55
USP38-202ENST00000510377 TMEM57Q8N5G2 664 aa18.5■□□□□ 0.55
USP38-202ENST00000510377 SSH1Q8WYL5 1049 aa18.5■□□□□ 0.55
USP38-202ENST00000510377 TBC1D32Q96NH3 1257 aa18.5■□□□□ 0.55
USP38-202ENST00000510377 LMOD2Q6P5Q4 547 aa18.49■□□□□ 0.55
USP38-202ENST00000510377 ARHGEF12Q9NZN5 1544 aa18.49■□□□□ 0.55
USP38-202ENST00000510377 NUTM2FA1L443 756 aa18.49■□□□□ 0.55
USP38-202ENST00000510377 COL17A1Q9UMD9 1497 aaPredicted RBP18.49■□□□□ 0.55
USP38-202ENST00000510377 CARD14Q9BXL6 1004 aa18.48■□□□□ 0.55
USP38-202ENST00000510377 AAMPQ13685 434 aa18.48■□□□□ 0.55
USP38-202ENST00000510377 ADAMTS12P58397 1594 aa18.48■□□□□ 0.55
USP38-202ENST00000510377 MCTP1Q6DN14 999 aa18.47■□□□□ 0.55
USP38-202ENST00000510377 GRPEL1Q9HAV7 217 aa18.47■□□□□ 0.55
USP38-202ENST00000510377 A2MP01023 1474 aa18.47■□□□□ 0.55
USP38-202ENST00000510377 KIF16BQ96L93 1317 aa18.47■□□□□ 0.55
USP38-202ENST00000510377 KIF21AQ7Z4S6 1674 aa18.46■□□□□ 0.55
USP38-202ENST00000510377 SCAPERQ9BY12 1400 aa18.46■□□□□ 0.55
USP38-202ENST00000510377 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
USP38-202ENST00000510377 THUMPD2Q9BTF0 503 aaKnown RBP18.46■□□□□ 0.55
USP38-202ENST00000510377 BLMP54132 1417 aaPredicted RBP18.45■□□□□ 0.54
USP38-202ENST00000510377 XRCC6P12956 609 aaKnown RBP eCLIP18.45■□□□□ 0.54
USP38-202ENST00000510377 SKOR2Q2VWA4 1001 aaPredicted RBP18.45■□□□□ 0.54
USP38-202ENST00000510377 NINLQ9Y2I6 1382 aa18.45■□□□□ 0.54
USP38-202ENST00000510377 TRIM27P14373 513 aa18.44■□□□□ 0.54
USP38-202ENST00000510377 PRKAR2BP31323 418 aa18.44■□□□□ 0.54
USP38-202ENST00000510377 PTMSP20962 102 aa18.44■□□□□ 0.54
USP38-202ENST00000510377 ADGRL2O95490 1459 aa18.44■□□□□ 0.54
USP38-202ENST00000510377 SCAF11Q99590 1463 aaKnown RBP18.44■□□□□ 0.54
USP38-202ENST00000510377 ITSN2Q9NZM3 1697 aa18.43■□□□□ 0.54
USP38-202ENST00000510377 ZMYM4Q5VZL5 1548 aa18.43■□□□□ 0.54
USP38-202ENST00000510377 TRIM6-TRIM34B2RNG4 842 aa18.43■□□□□ 0.54
USP38-202ENST00000510377 TMPOP42166 694 aaKnown RBP18.43■□□□□ 0.54
USP38-202ENST00000510377 MBD5Q9P267 1494 aa18.42■□□□□ 0.54
USP38-202ENST00000510377 NASPP49321 788 aaPredicted RBP18.42■□□□□ 0.54
USP38-202ENST00000510377 ESPNB1AK53 854 aa18.41■□□□□ 0.54
USP38-202ENST00000510377 ST18O60284 1047 aa18.41■□□□□ 0.54
USP38-202ENST00000510377 CAVIN1Q6NZI2 390 aaKnown RBP18.41■□□□□ 0.54
USP38-202ENST00000510377 CHD1LQ86WJ1 897 aa18.41■□□□□ 0.54
USP38-202ENST00000510377 ASXL1Q8IXJ9 1541 aa18.41■□□□□ 0.54
USP38-202ENST00000510377 HDGFP51858 240 aaKnown RBP18.41■□□□□ 0.54
USP38-202ENST00000510377 RRAGDQ9NQL2 400 aaPredicted RBP18.4■□□□□ 0.54
USP38-202ENST00000510377 SYCP2Q9BX26 1530 aa18.4■□□□□ 0.54
USP38-202ENST00000510377 LRRIQ1Q96JM4 1722 aa18.4■□□□□ 0.54
USP38-202ENST00000510377 GPRASP1Q5JY77 1395 aa18.39■□□□□ 0.54
USP38-202ENST00000510377 RNF214Q8ND24 703 aa18.38■□□□□ 0.53
USP38-202ENST00000510377 FAM13BQ9NYF5 915 aa18.38■□□□□ 0.53
USP38-202ENST00000510377 MCCP23508 829 aa18.38■□□□□ 0.53
USP38-202ENST00000510377 RILPL2Q969X0 211 aa18.38■□□□□ 0.53
USP38-202ENST00000510377 A0A0G2JS52 829 aa18.38■□□□□ 0.53
USP38-202ENST00000510377 FBLN1P23142 703 aa18.37■□□□□ 0.53
USP38-202ENST00000510377 TNPO1Q92973 898 aaKnown RBP18.37■□□□□ 0.53
USP38-202ENST00000510377 HAP1P54257 671 aaPredicted RBP18.37■□□□□ 0.53
USP38-202ENST00000510377 CDC45O75419 566 aa18.37■□□□□ 0.53
USP38-202ENST00000510377 OS9Q13438 667 aaPredicted RBP18.37■□□□□ 0.53
USP38-202ENST00000510377 MAGI2Q86UL8 1455 aa18.36■□□□□ 0.53
USP38-202ENST00000510377 RTF1Q92541 710 aaKnown RBP18.36■□□□□ 0.53
USP38-202ENST00000510377 NECTIN2Q92692 538 aa18.36■□□□□ 0.53
USP38-202ENST00000510377 PRAM1Q96QH2 718 aa18.35■□□□□ 0.53
USP38-202ENST00000510377 MPNDQ8N594 471 aa18.35■□□□□ 0.53
USP38-202ENST00000510377 K7ELQ4 463 aaPredicted RBP18.34■□□□□ 0.53
USP38-202ENST00000510377 PRPF40AO75400 957 aaKnown RBP18.34■□□□□ 0.53
USP38-202ENST00000510377 R3HCC1Q9Y3T6 440 aaKnown RBP18.34■□□□□ 0.53
USP38-202ENST00000510377 SSFA2P28290 1259 aa18.34■□□□□ 0.53
USP38-202ENST00000510377 RBM10P98175 930 aaKnown RBP18.34■□□□□ 0.53
USP38-202ENST00000510377 API5Q9BZZ5 524 aaKnown RBP18.34■□□□□ 0.53
USP38-202ENST00000510377 CABP1Q9NZU7 370 aa18.34■□□□□ 0.53
USP38-202ENST00000510377 CFAP44Q96MT7 982 aa18.33■□□□□ 0.53
USP38-202ENST00000510377 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.53
USP38-202ENST00000510377 KCNJ4P48050 445 aa18.33■□□□□ 0.52
USP38-202ENST00000510377 PIK3C2GO75747 1445 aa18.33■□□□□ 0.52
USP38-202ENST00000510377 GNAI1P63096 354 aa18.33■□□□□ 0.52
USP38-202ENST00000510377 ZNF521Q96K83 1311 aa18.32■□□□□ 0.52
USP38-202ENST00000510377 TWISTNBQ3B726 338 aaPredicted RBP18.32■□□□□ 0.52
USP38-202ENST00000510377 SHANK2Q9UPX8 1470 aa18.32■□□□□ 0.52
USP38-202ENST00000510377 HMMRO75330 724 aa18.32■□□□□ 0.52
USP38-202ENST00000510377 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
USP38-202ENST00000510377 LMOD3Q0VAK6 560 aa18.31■□□□□ 0.52
USP38-202ENST00000510377 EID1Q9Y6B2 187 aa18.3■□□□□ 0.52
USP38-202ENST00000510377 NUP160Q12769 1436 aa18.3■□□□□ 0.52
USP38-202ENST00000510377 NUCB2P80303 420 aa18.3■□□□□ 0.52
USP38-202ENST00000510377 INTS3Q68E01 1043 aaKnown RBP18.3■□□□□ 0.52
USP38-202ENST00000510377 ANO2Q9NQ90 1003 aa18.3■□□□□ 0.52
USP38-202ENST00000510377 COG3Q96JB2 828 aa18.29■□□□□ 0.52
USP38-202ENST00000510377 NOS1P29475 1434 aa18.29■□□□□ 0.52
USP38-202ENST00000510377 TARBP1Q13395 1621 aaKnown RBP18.29■□□□□ 0.52
USP38-202ENST00000510377 DCTN1Q14203 1278 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms