RNA–Protein interactions for RNA: ENST00000509673.2

PGBD4P4-201, Transcript of piggyBac transposable element derived 4 pseudogene 4, humanhuman

BASIC

Gene PGBD4P4, Length 613 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P4-201ENST00000509673 WNT7AO00755 349 aa9.73□□□□□ -0.85
PGBD4P4-201ENST00000509673 SMCPP49901 116 aaPredicted RBP9.73□□□□□ -0.85
PGBD4P4-201ENST00000509673 USP46P62068 366 aa9.73□□□□□ -0.85
PGBD4P4-201ENST00000509673 MAP2K5Q13163 448 aa9.73□□□□□ -0.85
PGBD4P4-201ENST00000509673 RNF19BQ6ZMZ0 732 aa9.73□□□□□ -0.85
PGBD4P4-201ENST00000509673 CD46P15529 392 aa9.72□□□□□ -0.85
PGBD4P4-201ENST00000509673 MMP16P51512 607 aa9.72□□□□□ -0.85
PGBD4P4-201ENST00000509673 KDM4AO75164 1064 aa9.71□□□□□ -0.86
PGBD4P4-201ENST00000509673 TRIM32Q13049 653 aa9.71□□□□□ -0.86
PGBD4P4-201ENST00000509673 TREML4Q6UXN2 200 aa9.71□□□□□ -0.86
PGBD4P4-201ENST00000509673 SNIP1Q8TAD8 396 aaKnown RBP9.7□□□□□ -0.86
PGBD4P4-201ENST00000509673 USB1Q9BQ65 265 aaKnown RBP9.7□□□□□ -0.86
PGBD4P4-201ENST00000509673 REPIN1Q9BWE0 567 aaKnown RBP9.7□□□□□ -0.86
PGBD4P4-201ENST00000509673 C11orf95C9JLR9 678 aaPredicted RBP9.69□□□□□ -0.86
PGBD4P4-201ENST00000509673 HAP1P54257 671 aaPredicted RBP9.68□□□□□ -0.86
PGBD4P4-201ENST00000509673 MINK1Q8N4C8 1332 aaPredicted RBP9.67□□□□□ -0.86
PGBD4P4-201ENST00000509673 IRF6O14896 467 aa9.67□□□□□ -0.86
PGBD4P4-201ENST00000509673 DXOO77932 396 aaKnown RBP9.67□□□□□ -0.86
PGBD4P4-201ENST00000509673 GMPR2Q9P2T1 348 aaKnown RBP9.65□□□□□ -0.86
PGBD4P4-201ENST00000509673 DACH1Q9UI36 760 aa9.65□□□□□ -0.86
PGBD4P4-201ENST00000509673 SMPD1P17405 629 aa9.64□□□□□ -0.87
PGBD4P4-201ENST00000509673 MDM2Q00987 491 aaPredicted RBP9.64□□□□□ -0.87
PGBD4P4-201ENST00000509673 MRGPRX2Q96LB1 330 aa9.64□□□□□ -0.87
PGBD4P4-201ENST00000509673 WNT7BP56706 349 aa9.63□□□□□ -0.87
PGBD4P4-201ENST00000509673 LCE2AQ5TA79 106 aaPredicted RBP9.63□□□□□ -0.87
PGBD4P4-201ENST00000509673 SENP2Q9HC62 589 aa9.63□□□□□ -0.87
PGBD4P4-201ENST00000509673 HOXA2O43364 376 aa9.62□□□□□ -0.87
PGBD4P4-201ENST00000509673 WFS1O76024 890 aa9.62□□□□□ -0.87
PGBD4P4-201ENST00000509673 CLCN1P35523 988 aa9.62□□□□□ -0.87
PGBD4P4-201ENST00000509673 CCDC24Q8N4L8 307 aa9.62□□□□□ -0.87
PGBD4P4-201ENST00000509673 GPCPD1Q9NPB8 672 aa9.61□□□□□ -0.87
PGBD4P4-201ENST00000509673 ATP13A2Q9NQ11 1180 aa9.6□□□□□ -0.87
PGBD4P4-201ENST00000509673 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
PGBD4P4-201ENST00000509673 RC3H1Q5TC82 1133 aaKnown RBP9.59□□□□□ -0.87
PGBD4P4-201ENST00000509673 KRI1Q8N9T8 703 aaKnown RBP9.59□□□□□ -0.87
PGBD4P4-201ENST00000509673 JUNDP17535 347 aa9.58□□□□□ -0.88
PGBD4P4-201ENST00000509673 NUTM1Q86Y26 1132 aa9.58□□□□□ -0.88
PGBD4P4-201ENST00000509673 CCDC102AQ96A19 550 aa9.58□□□□□ -0.88
PGBD4P4-201ENST00000509673 KIFC2Q96AC6 838 aa9.58□□□□□ -0.88
PGBD4P4-201ENST00000509673 J3QL48 77 aa9.57□□□□□ -0.88
PGBD4P4-201ENST00000509673 TRIM47Q96LD4 638 aa9.57□□□□□ -0.88
PGBD4P4-201ENST00000509673 FAM217BQ9NTX9 383 aaPredicted RBP9.57□□□□□ -0.88
PGBD4P4-201ENST00000509673 RETREG3Q86VR2 466 aa9.56□□□□□ -0.88
PGBD4P4-201ENST00000509673 VSIG10Q8N0Z9 540 aa9.55□□□□□ -0.88
PGBD4P4-201ENST00000509673 HLA-CQ95604 372 aa9.55□□□□□ -0.88
PGBD4P4-201ENST00000509673 NFX1Q12986 1120 aaKnown RBP9.54□□□□□ -0.88
PGBD4P4-201ENST00000509673 HPS1Q92902 700 aa9.54□□□□□ -0.88
PGBD4P4-201ENST00000509673 NUDT12Q9BQG2 462 aa9.54□□□□□ -0.88
PGBD4P4-201ENST00000509673 WIPF1O43516 503 aa9.53□□□□□ -0.88
PGBD4P4-201ENST00000509673 SKOR1P84550 965 aa9.53□□□□□ -0.88
PGBD4P4-201ENST00000509673 INSM1Q01101 510 aaPredicted RBP9.53□□□□□ -0.88
PGBD4P4-201ENST00000509673 STK17AQ9UEE5 414 aa9.52□□□□□ -0.89
PGBD4P4-201ENST00000509673 ALDH1A1P00352 501 aa9.51□□□□□ -0.89
PGBD4P4-201ENST00000509673 SNRPBP14678 240 aaKnown RBP9.51□□□□□ -0.89
PGBD4P4-201ENST00000509673 GUCA2AQ02747 115 aa9.51□□□□□ -0.89
PGBD4P4-201ENST00000509673 EHBP1Q8NDI1 1231 aa9.51□□□□□ -0.89
PGBD4P4-201ENST00000509673 TERTO14746 1132 aaKnown RBP9.5□□□□□ -0.89
PGBD4P4-201ENST00000509673 SLC24A1O60721 1099 aa9.5□□□□□ -0.89
PGBD4P4-201ENST00000509673 FDX1P10109 184 aa9.5□□□□□ -0.89
PGBD4P4-201ENST00000509673 C6orf229H3BNL8 230 aa9.49□□□□□ -0.89
PGBD4P4-201ENST00000509673 MS4A1P11836 297 aa9.49□□□□□ -0.89
PGBD4P4-201ENST00000509673 SYMPKQ92797 1274 aaKnown RBP9.49□□□□□ -0.89
PGBD4P4-201ENST00000509673 CCNYL3P0C7X3 344 aa9.48□□□□□ -0.89
PGBD4P4-201ENST00000509673 PTPRNQ16849 979 aa9.47□□□□□ -0.89
PGBD4P4-201ENST00000509673 WASF2Q9Y6W5 498 aa9.47□□□□□ -0.89
PGBD4P4-201ENST00000509673 SPDYE5A6NIY4 337 aa9.46□□□□□ -0.9
PGBD4P4-201ENST00000509673 SIAH2O43255 324 aa9.46□□□□□ -0.9
PGBD4P4-201ENST00000509673 SSTR3P32745 418 aaPredicted RBP9.45□□□□□ -0.9
PGBD4P4-201ENST00000509673 PTCRAQ6ISU1 281 aaPredicted RBP9.45□□□□□ -0.9
PGBD4P4-201ENST00000509673 SLC16A10Q8TF71 515 aa9.45□□□□□ -0.9
PGBD4P4-201ENST00000509673 PCDHGC3Q9UN70 934 aa9.44□□□□□ -0.9
PGBD4P4-201ENST00000509673 CAPN5O15484 640 aaPredicted RBP9.43□□□□□ -0.9
PGBD4P4-201ENST00000509673 SH3BP2P78314 561 aa9.43□□□□□ -0.9
PGBD4P4-201ENST00000509673 DESI1Q6ICB0 168 aa9.43□□□□□ -0.9
PGBD4P4-201ENST00000509673 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.43□□□□□ -0.9
PGBD4P4-201ENST00000509673 EVA1BQ9NVM1 165 aa9.43□□□□□ -0.9
PGBD4P4-201ENST00000509673 PLEKHG3A1L390 1219 aa9.42□□□□□ -0.9
PGBD4P4-201ENST00000509673 TTLL12Q14166 644 aaPredicted RBP9.42□□□□□ -0.9
PGBD4P4-201ENST00000509673 NPAS3Q8IXF0 933 aa9.42□□□□□ -0.9
PGBD4P4-201ENST00000509673 SPIRE2Q8WWL2 714 aa9.42□□□□□ -0.9
PGBD4P4-201ENST00000509673 UNC93B1Q9H1C4 597 aa9.42□□□□□ -0.9
PGBD4P4-201ENST00000509673 DIXDC1Q155Q3 683 aa9.41□□□□□ -0.9
PGBD4P4-201ENST00000509673 VARSP26640 1264 aaKnown RBP9.4□□□□□ -0.9
PGBD4P4-201ENST00000509673 GJA5P36382 358 aa9.4□□□□□ -0.9
PGBD4P4-201ENST00000509673 KCNH2Q12809 1159 aa9.4□□□□□ -0.9
PGBD4P4-201ENST00000509673 MTMR2Q13614 643 aa9.4□□□□□ -0.9
PGBD4P4-201ENST00000509673 MPNDQ8N594 471 aa9.4□□□□□ -0.9
PGBD4P4-201ENST00000509673 NXF1Q9UBU9 619 aaKnown RBP9.4□□□□□ -0.9
PGBD4P4-201ENST00000509673 FAM181BA6NEQ2 426 aa9.39□□□□□ -0.91
PGBD4P4-201ENST00000509673 AMHR2Q16671 573 aa9.39□□□□□ -0.91
PGBD4P4-201ENST00000509673 PRR7Q8TB68 274 aa9.39□□□□□ -0.91
PGBD4P4-201ENST00000509673 MOXD2PA6NHM9 499 aa9.38□□□□□ -0.91
PGBD4P4-201ENST00000509673 BARGINQ6ZT62 677 aa9.38□□□□□ -0.91
PGBD4P4-201ENST00000509673 BMP1P13497 986 aa9.37□□□□□ -0.91
PGBD4P4-201ENST00000509673 NDUFV2P19404 249 aa9.37□□□□□ -0.91
PGBD4P4-201ENST00000509673 TRIM46Q7Z4K8 759 aa9.37□□□□□ -0.91
PGBD4P4-201ENST00000509673 ZNF511Q8NB15 262 aa9.37□□□□□ -0.91
PGBD4P4-201ENST00000509673 BAP1Q92560 729 aa9.37□□□□□ -0.91
PGBD4P4-201ENST00000509673 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
PGBD4P4-201ENST00000509673 IRF7Q92985 503 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms