RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 TNNT2P45379 298 aaPredicted RBP23.33■■□□□ 1.33
CCHCR1-228ENST00000509552 USP32Q8NFA0 1604 aa23.33■■□□□ 1.33
CCHCR1-228ENST00000509552 SIGLEC1Q9BZZ2 1709 aa23.33■■□□□ 1.33
CCHCR1-228ENST00000509552 DIP2CQ9Y2E4 1556 aa23.33■■□□□ 1.33
CCHCR1-228ENST00000509552 NBR1Q14596 966 aa23.33■■□□□ 1.33
CCHCR1-228ENST00000509552 WWC1Q8IX03 1113 aa23.32■■□□□ 1.32
CCHCR1-228ENST00000509552 ARHGAP31Q2M1Z3 1444 aa23.32■■□□□ 1.32
CCHCR1-228ENST00000509552 NEXMIFQ5QGS0 1516 aa23.31■■□□□ 1.32
CCHCR1-228ENST00000509552 NUTM2DQ5VT03 806 aaPredicted RBP23.31■■□□□ 1.32
CCHCR1-228ENST00000509552 RUNDC1Q96C34 613 aa23.31■■□□□ 1.32
CCHCR1-228ENST00000509552 CFAP53Q96M91 514 aa23.31■■□□□ 1.32
CCHCR1-228ENST00000509552 BCAR3O75815 825 aa23.31■■□□□ 1.32
CCHCR1-228ENST00000509552 SKAP1Q86WV1 359 aa23.3■■□□□ 1.32
CCHCR1-228ENST00000509552 SHPRHQ149N8 1683 aa23.29■■□□□ 1.32
CCHCR1-228ENST00000509552 DMRT2Q9Y5R5 561 aa23.29■■□□□ 1.32
CCHCR1-228ENST00000509552 ANKRD36BQ8N2N9 1353 aa23.28■■□□□ 1.32
CCHCR1-228ENST00000509552 NSD2O96028 1365 aa23.28■■□□□ 1.32
CCHCR1-228ENST00000509552 SLC52A1Q9NWF4 448 aa23.28■■□□□ 1.32
CCHCR1-228ENST00000509552 ARHGEF28Q8N1W1 1705 aaKnown RBP23.28■■□□□ 1.32
CCHCR1-228ENST00000509552 NINLQ9Y2I6 1382 aa23.27■■□□□ 1.32
CCHCR1-228ENST00000509552 MTHFSP49914 203 aa23.27■■□□□ 1.32
CCHCR1-228ENST00000509552 IDI1Q13907 227 aa23.27■■□□□ 1.32
CCHCR1-228ENST00000509552 TULP4Q9NRJ4 1543 aa23.26■■□□□ 1.31
CCHCR1-228ENST00000509552 PDE3AQ14432 1141 aa23.26■■□□□ 1.31
CCHCR1-228ENST00000509552 ZFYVE9O95405 1425 aa23.25■■□□□ 1.31
CCHCR1-228ENST00000509552 DDRGK1Q96HY6 314 aa23.25■■□□□ 1.31
CCHCR1-228ENST00000509552 RICTORQ6R327 1708 aa23.25■■□□□ 1.31
CCHCR1-228ENST00000509552 CANXP27824 592 aaKnown RBP23.24■■□□□ 1.31
CCHCR1-228ENST00000509552 NEUROD2Q15784 382 aa23.24■■□□□ 1.31
CCHCR1-228ENST00000509552 TCP11L2Q8N4U5 519 aa23.24■■□□□ 1.31
CCHCR1-228ENST00000509552 RTL5Q5HYW3 569 aaPredicted RBP23.24■■□□□ 1.31
CCHCR1-228ENST00000509552 WDR63Q8IWG1 891 aa23.22■■□□□ 1.31
CCHCR1-228ENST00000509552 CABP2Q9NPB3 220 aa23.22■■□□□ 1.31
CCHCR1-228ENST00000509552 IQSEC2Q5JU85 1478 aa23.22■■□□□ 1.31
CCHCR1-228ENST00000509552 FAM161AQ3B820 660 aa23.21■■□□□ 1.31
CCHCR1-228ENST00000509552 RRP7AQ9Y3A4 280 aaKnown RBP23.21■■□□□ 1.31
CCHCR1-228ENST00000509552 DEKP35659 375 aaKnown RBP23.2■■□□□ 1.3
CCHCR1-228ENST00000509552 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
CCHCR1-228ENST00000509552 YEATS2Q9ULM3 1422 aa23.19■■□□□ 1.3
CCHCR1-228ENST00000509552 SAFB2Q14151 953 aaKnown RBP eCLIP23.19■■□□□ 1.3
CCHCR1-228ENST00000509552 CCDC27Q2M243 656 aa23.19■■□□□ 1.3
CCHCR1-228ENST00000509552 NCBP3Q53F19 620 aaKnown RBP23.18■■□□□ 1.3
CCHCR1-228ENST00000509552 STK26Q9P289 416 aa23.18■■□□□ 1.3
CCHCR1-228ENST00000509552 SRPK2P78362 688 aaKnown RBP23.17■■□□□ 1.3
CCHCR1-228ENST00000509552 RGS3P49796 1198 aa23.16■■□□□ 1.3
CCHCR1-228ENST00000509552 U2AF1L5P0DN76 240 aaPredicted RBP23.15■■□□□ 1.3
CCHCR1-228ENST00000509552 U2AF1Q01081 240 aaKnown RBP eCLIP23.15■■□□□ 1.3
CCHCR1-228ENST00000509552 PREX1Q8TCU6 1659 aa23.15■■□□□ 1.3
CCHCR1-228ENST00000509552 RARSP54136 660 aaKnown RBP23.15■■□□□ 1.3
CCHCR1-228ENST00000509552 CLUAP1Q96AJ1 413 aa23.15■■□□□ 1.3
CCHCR1-228ENST00000509552 ABCC11Q96J66 1382 aa23.14■■□□□ 1.3
CCHCR1-228ENST00000509552 FRAT1Q92837 279 aaPredicted RBP23.14■■□□□ 1.3
CCHCR1-228ENST00000509552 A0A1W2PP64 1363 aa23.14■■□□□ 1.29
CCHCR1-228ENST00000509552 C8orf34Q49A92 452 aa23.14■■□□□ 1.29
CCHCR1-228ENST00000509552 MYH16Q9H6N6 1097 aa23.14■■□□□ 1.29
CCHCR1-228ENST00000509552 TMEM131LA2VDJ0 1609 aa23.14■■□□□ 1.29
CCHCR1-228ENST00000509552 ATAD2Q6PL18 1390 aa23.13■■□□□ 1.29
CCHCR1-228ENST00000509552 PANK1Q8TE04 598 aa23.13■■□□□ 1.29
CCHCR1-228ENST00000509552 BCL11AQ9H165 835 aa23.13■■□□□ 1.29
CCHCR1-228ENST00000509552 COG6Q9Y2V7 657 aa23.13■■□□□ 1.29
CCHCR1-228ENST00000509552 AAMPQ13685 434 aa23.13■■□□□ 1.29
CCHCR1-228ENST00000509552 TERF2IPQ9NYB0 399 aa23.12■■□□□ 1.29
CCHCR1-228ENST00000509552 POGKQ9P215 609 aa23.12■■□□□ 1.29
CCHCR1-228ENST00000509552 MYO5BQ9ULV0 1848 aa23.12■■□□□ 1.29
CCHCR1-228ENST00000509552 PPM1GO15355 546 aaPredicted RBP23.11■■□□□ 1.29
CCHCR1-228ENST00000509552 IGHDP01880 384 aa23.1■■□□□ 1.29
CCHCR1-228ENST00000509552 PTPRMP28827 1452 aa23.1■■□□□ 1.29
CCHCR1-228ENST00000509552 SENP3Q9H4L4 574 aaPredicted RBP23.1■■□□□ 1.29
CCHCR1-228ENST00000509552 PRAM1Q96QH2 718 aa23.09■■□□□ 1.29
CCHCR1-228ENST00000509552 YTHDC2Q9H6S0 1430 aaKnown RBP23.09■■□□□ 1.29
CCHCR1-228ENST00000509552 LAS1LQ9Y4W2 734 aaKnown RBP23.09■■□□□ 1.29
CCHCR1-228ENST00000509552 MINK1Q8N4C8 1332 aaPredicted RBP23.09■■□□□ 1.29
CCHCR1-228ENST00000509552 DAXXQ9UER7 740 aaPredicted RBP23.08■■□□□ 1.29
CCHCR1-228ENST00000509552 GGNBP2Q9H3C7 697 aa23.07■■□□□ 1.28
CCHCR1-228ENST00000509552 USP35Q9P2H5 1018 aa23.07■■□□□ 1.28
CCHCR1-228ENST00000509552 STAG3Q9UJ98 1225 aa23.07■■□□□ 1.28
CCHCR1-228ENST00000509552 ADGRB2O60241 1585 aa23.06■■□□□ 1.28
CCHCR1-228ENST00000509552 MAPK8IP3Q9UPT6 1336 aa23.06■■□□□ 1.28
CCHCR1-228ENST00000509552 PMFBP1Q8TBY8 1022 aa23.06■■□□□ 1.28
CCHCR1-228ENST00000509552 U2SURPO15042 1029 aaKnown RBP23.05■■□□□ 1.28
CCHCR1-228ENST00000509552 FBXO31Q5XUX0 539 aaPredicted RBP23.05■■□□□ 1.28
CCHCR1-228ENST00000509552 HDGFL2Q7Z4V5 671 aaPredicted RBP23.04■■□□□ 1.28
CCHCR1-228ENST00000509552 MED14O60244 1454 aa23.04■■□□□ 1.28
CCHCR1-228ENST00000509552 CLTCQ00610 1675 aaKnown RBP23.04■■□□□ 1.28
CCHCR1-228ENST00000509552 NEFMP07197 916 aa23.04■■□□□ 1.28
CCHCR1-228ENST00000509552 FYB1O15117 783 aa23.03■■□□□ 1.28
CCHCR1-228ENST00000509552 CT47B1P0C2W7 299 aaPredicted RBP23.03■■□□□ 1.28
CCHCR1-228ENST00000509552 BCL2L13Q9BXK5 485 aa23.02■■□□□ 1.28
CCHCR1-228ENST00000509552 ALKQ9UM73 1620 aa23.02■■□□□ 1.28
CCHCR1-228ENST00000509552 CYB5RLQ6IPT4 315 aa23.02■■□□□ 1.28
CCHCR1-228ENST00000509552 ANKRD26Q9UPS8 1709 aa23.01■■□□□ 1.27
CCHCR1-228ENST00000509552 PLEKHF1Q96S99 279 aa23■■□□□ 1.27
CCHCR1-228ENST00000509552 CDK19Q9BWU1 502 aa23■■□□□ 1.27
CCHCR1-228ENST00000509552 CD163L1Q9NR16 1453 aa23■■□□□ 1.27
CCHCR1-228ENST00000509552 PPP6R1Q9UPN7 881 aa23■■□□□ 1.27
CCHCR1-228ENST00000509552 COL3A1P02461 1466 aaPredicted RBP23■■□□□ 1.27
CCHCR1-228ENST00000509552 RLBP1P12271 317 aa22.99■■□□□ 1.27
CCHCR1-228ENST00000509552 TMPOP42166 694 aaKnown RBP22.99■■□□□ 1.27
CCHCR1-228ENST00000509552 FAM69CQ0P6D2 419 aa22.99■■□□□ 1.27
CCHCR1-228ENST00000509552 PNNQ9H307 717 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms