RNA–Protein interactions for RNA: ENST00000508963.1

RACK1-220, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-220ENST00000508963 WASLO00401 505 aaPredicted RBP8.79□□□□□ -1
RACK1-220ENST00000508963 TMF1P82094 1093 aa8.79□□□□□ -1
RACK1-220ENST00000508963 CDK19Q9BWU1 502 aa8.79□□□□□ -1
RACK1-220ENST00000508963 ARHGEF28Q8N1W1 1705 aaKnown RBP8.79□□□□□ -1
RACK1-220ENST00000508963 NCOA3Q9Y6Q9 1424 aa8.79□□□□□ -1
RACK1-220ENST00000508963 KIF7Q2M1P5 1343 aa8.79□□□□□ -1
RACK1-220ENST00000508963 MINK1Q8N4C8 1332 aaPredicted RBP8.79□□□□□ -1
RACK1-220ENST00000508963 STRCP1A6NGW2 1772 aa8.78□□□□□ -1
RACK1-220ENST00000508963 KNDC1Q76NI1 1749 aa8.78□□□□□ -1
RACK1-220ENST00000508963 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.77□□□□□ -1
RACK1-220ENST00000508963 CCDC7Q96M83 1385 aa8.77□□□□□ -1.01
RACK1-220ENST00000508963 C19orf44Q9H6X5 657 aa8.77□□□□□ -1.01
RACK1-220ENST00000508963 EVC2Q86UK5 1308 aa8.77□□□□□ -1.01
RACK1-220ENST00000508963 NKTRP30414 1462 aaKnown RBP8.77□□□□□ -1.01
RACK1-220ENST00000508963 TMEM94Q12767 1356 aa8.76□□□□□ -1.01
RACK1-220ENST00000508963 LRRC7Q96NW7 1537 aa8.76□□□□□ -1.01
RACK1-220ENST00000508963 CABP2Q9NPB3 220 aa8.76□□□□□ -1.01
RACK1-220ENST00000508963 PRR36Q9H6K5 1346 aa8.76□□□□□ -1.01
RACK1-220ENST00000508963 LTBP4Q8N2S1 1624 aa8.76□□□□□ -1.01
RACK1-220ENST00000508963 TULP4Q9NRJ4 1543 aa8.75□□□□□ -1.01
RACK1-220ENST00000508963 CDCA8Q53HL2 280 aa8.75□□□□□ -1.01
RACK1-220ENST00000508963 ADGRL3Q9HAR2 1447 aa8.74□□□□□ -1.01
RACK1-220ENST00000508963 PER1O15534 1290 aaPredicted RBP8.74□□□□□ -1.01
RACK1-220ENST00000508963 NUDT16Q96DE0 195 aaKnown RBP8.74□□□□□ -1.01
RACK1-220ENST00000508963 SLC12A5Q9H2X9 1139 aa8.74□□□□□ -1.01
RACK1-220ENST00000508963 QRICH2Q9H0J4 1663 aa8.73□□□□□ -1.01
RACK1-220ENST00000508963 PLEKHG3A1L390 1219 aa8.73□□□□□ -1.01
RACK1-220ENST00000508963 SRPK2P78362 688 aaKnown RBP8.73□□□□□ -1.01
RACK1-220ENST00000508963 DDX10Q13206 875 aaKnown RBP8.73□□□□□ -1.01
RACK1-220ENST00000508963 CCDC61Q9Y6R9 512 aa8.73□□□□□ -1.01
RACK1-220ENST00000508963 ADGRB2O60241 1585 aa8.73□□□□□ -1.01
RACK1-220ENST00000508963 CARD14Q9BXL6 1004 aa8.72□□□□□ -1.01
RACK1-220ENST00000508963 CABP1Q9NZU7 370 aa8.72□□□□□ -1.01
RACK1-220ENST00000508963 PANK3Q9H999 370 aa8.71□□□□□ -1.02
RACK1-220ENST00000508963 ATAD2Q6PL18 1390 aa8.71□□□□□ -1.02
RACK1-220ENST00000508963 DCCP43146 1447 aa8.71□□□□□ -1.02
RACK1-220ENST00000508963 XIRP1Q702N8 1843 aaKnown RBP8.7□□□□□ -1.02
RACK1-220ENST00000508963 NUTM2FA1L443 756 aa8.7□□□□□ -1.02
RACK1-220ENST00000508963 CADPS2Q86UW7 1296 aa8.7□□□□□ -1.02
RACK1-220ENST00000508963 ORAI2Q96SN7 254 aa8.7□□□□□ -1.02
RACK1-220ENST00000508963 SLAIN2Q9P270 581 aa8.7□□□□□ -1.02
RACK1-220ENST00000508963 ANKARQ7Z5J8 1434 aa8.7□□□□□ -1.02
RACK1-220ENST00000508963 ATP7BP35670 1465 aa8.7□□□□□ -1.02
RACK1-220ENST00000508963 CD163L1Q9NR16 1453 aa8.7□□□□□ -1.02
RACK1-220ENST00000508963 NALCNQ8IZF0 1738 aa8.69□□□□□ -1.02
RACK1-220ENST00000508963 ATF3P18847 181 aa8.69□□□□□ -1.02
RACK1-220ENST00000508963 C14orf37Q86TY3 774 aa8.69□□□□□ -1.02
RACK1-220ENST00000508963 POLR3GLQ9BT43 218 aa8.69□□□□□ -1.02
RACK1-220ENST00000508963 MST1RQ04912 1400 aa8.69□□□□□ -1.02
RACK1-220ENST00000508963 CPSF1Q10570 1443 aaKnown RBP8.69□□□□□ -1.02
RACK1-220ENST00000508963 CDC42BPGQ6DT37 1551 aa8.69□□□□□ -1.02
RACK1-220ENST00000508963 USP32Q8NFA0 1604 aa8.69□□□□□ -1.02
RACK1-220ENST00000508963 TMC1Q8TDI8 760 aa8.68□□□□□ -1.02
RACK1-220ENST00000508963 ZNF692Q9BU19 519 aaPredicted RBP8.68□□□□□ -1.02
RACK1-220ENST00000508963 MSH6P52701 1360 aa8.68□□□□□ -1.02
RACK1-220ENST00000508963 NINLQ9Y2I6 1382 aa8.68□□□□□ -1.02
RACK1-220ENST00000508963 C1orf167Q5SNV9 1468 aa8.68□□□□□ -1.02
RACK1-220ENST00000508963 POLR3AO14802 1390 aaPredicted RBP8.67□□□□□ -1.02
RACK1-220ENST00000508963 ACEP12821 1306 aa8.67□□□□□ -1.02
RACK1-220ENST00000508963 PPIP5K1Q6PFW1 1433 aa8.67□□□□□ -1.02
RACK1-220ENST00000508963 PMFBP1Q8TBY8 1022 aa8.67□□□□□ -1.02
RACK1-220ENST00000508963 CERKQ8TCT0 537 aa8.67□□□□□ -1.02
RACK1-220ENST00000508963 PHF8Q9UPP1 1060 aa8.67□□□□□ -1.02
RACK1-220ENST00000508963 FMN2Q9NZ56 1722 aa8.66□□□□□ -1.02
RACK1-220ENST00000508963 SSH2Q76I76 1423 aa8.66□□□□□ -1.02
RACK1-220ENST00000508963 ANKRD36BQ8N2N9 1353 aa8.66□□□□□ -1.02
RACK1-220ENST00000508963 ESCO1Q5FWF5 840 aa8.66□□□□□ -1.02
RACK1-220ENST00000508963 AMER1Q5JTC6 1135 aaPredicted RBP8.66□□□□□ -1.02
RACK1-220ENST00000508963 BRINP3Q76B58 766 aa8.66□□□□□ -1.02
RACK1-220ENST00000508963 TERF2IPQ9NYB0 399 aa8.66□□□□□ -1.02
RACK1-220ENST00000508963 A0A1W2PP64 1363 aa8.65□□□□□ -1.02
RACK1-220ENST00000508963 MYOM1P52179 1685 aa8.65□□□□□ -1.03
RACK1-220ENST00000508963 FYB1O15117 783 aa8.64□□□□□ -1.03
RACK1-220ENST00000508963 FOXO3O43524 673 aa8.64□□□□□ -1.03
RACK1-220ENST00000508963 DIEXFQ68CQ4 756 aaKnown RBP8.64□□□□□ -1.03
RACK1-220ENST00000508963 HDGFL2Q7Z4V5 671 aaPredicted RBP8.64□□□□□ -1.03
RACK1-220ENST00000508963 NGDNQ8NEJ9 315 aaKnown RBP8.64□□□□□ -1.03
RACK1-220ENST00000508963 IQSEC2Q5JU85 1478 aa8.64□□□□□ -1.03
RACK1-220ENST00000508963 RGPD8O14715 1765 aaPredicted RBP8.63□□□□□ -1.03
RACK1-220ENST00000508963 NPC1L1Q9UHC9 1359 aa8.63□□□□□ -1.03
RACK1-220ENST00000508963 TOPAZ1Q8N9V7 1692 aa8.63□□□□□ -1.03
RACK1-220ENST00000508963 DDX17Q92841 729 aaKnown RBP8.63□□□□□ -1.03
RACK1-220ENST00000508963 KTN1Q86UP2 1357 aaKnown RBP8.62□□□□□ -1.03
RACK1-220ENST00000508963 TTC21BQ7Z4L5 1316 aa8.62□□□□□ -1.03
RACK1-220ENST00000508963 TOM1O60784 492 aa8.62□□□□□ -1.03
RACK1-220ENST00000508963 PSME1Q06323 249 aa8.62□□□□□ -1.03
RACK1-220ENST00000508963 KRT28Q7Z3Y7 464 aa8.62□□□□□ -1.03
RACK1-220ENST00000508963 KNSTRNQ9Y448 316 aa8.62□□□□□ -1.03
RACK1-220ENST00000508963 USP6P35125 1406 aa8.62□□□□□ -1.03
RACK1-220ENST00000508963 BRD4O60885 1362 aaPredicted RBP8.61□□□□□ -1.03
RACK1-220ENST00000508963 SOS2Q07890 1332 aaPredicted RBP8.61□□□□□ -1.03
RACK1-220ENST00000508963 PRKRIP1Q9H875 184 aaPredicted RBP8.61□□□□□ -1.03
RACK1-220ENST00000508963 ZRANB1Q9UGI0 708 aa8.61□□□□□ -1.03
RACK1-220ENST00000508963 EDC4Q6P2E9 1401 aaKnown RBP8.61□□□□□ -1.03
RACK1-220ENST00000508963 NSD3Q9BZ95 1437 aa8.61□□□□□ -1.03
RACK1-220ENST00000508963 NME9Q86XW9 330 aa8.6□□□□□ -1.03
RACK1-220ENST00000508963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.6□□□□□ -1.03
RACK1-220ENST00000508963 CGNL1Q0VF96 1302 aa8.59□□□□□ -1.03
RACK1-220ENST00000508963 NPHP3Q7Z494 1330 aa8.59□□□□□ -1.03
RACK1-220ENST00000508963 TTC21AQ8NDW8 1320 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms