RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 DISP3Q9P2K9 1392 aa24.47■■□□□ 1.51
CLDND1-219ENST00000508659 SIRT1Q96EB6 747 aa24.47■■□□□ 1.51
CLDND1-219ENST00000508659 COL16A1Q07092 1604 aaPredicted RBP24.46■■□□□ 1.51
CLDND1-219ENST00000508659 PRAM1Q96QH2 718 aa24.46■■□□□ 1.51
CLDND1-219ENST00000508659 KIAA1210Q9ULL0 1709 aa24.45■■□□□ 1.5
CLDND1-219ENST00000508659 L3MBTL2Q969R5 705 aa24.45■■□□□ 1.5
CLDND1-219ENST00000508659 TRAK1Q9UPV9 953 aa24.44■■□□□ 1.5
CLDND1-219ENST00000508659 POGKQ9P215 609 aa24.43■■□□□ 1.5
CLDND1-219ENST00000508659 NHSL1Q5SYE7 1610 aa24.43■■□□□ 1.5
CLDND1-219ENST00000508659 SAFB2Q14151 953 aaKnown RBP eCLIP24.42■■□□□ 1.5
CLDND1-219ENST00000508659 JCADQ9P266 1359 aa24.41■■□□□ 1.5
CLDND1-219ENST00000508659 PCGF6Q9BYE7 350 aa24.4■■□□□ 1.5
CLDND1-219ENST00000508659 ARHGEF28Q8N1W1 1705 aaKnown RBP24.39■■□□□ 1.5
CLDND1-219ENST00000508659 FMN2Q9NZ56 1722 aa24.39■■□□□ 1.5
CLDND1-219ENST00000508659 ADGRB2O60241 1585 aa24.39■■□□□ 1.5
CLDND1-219ENST00000508659 TONSLQ96HA7 1378 aa24.39■■□□□ 1.49
CLDND1-219ENST00000508659 ORAI2Q96SN7 254 aa24.36■■□□□ 1.49
CLDND1-219ENST00000508659 NUTM2FA1L443 756 aa24.35■■□□□ 1.49
CLDND1-219ENST00000508659 ESCO1Q5FWF5 840 aa24.34■■□□□ 1.49
CLDND1-219ENST00000508659 NBPF1Q3BBV0 1214 aa24.33■■□□□ 1.49
CLDND1-219ENST00000508659 DDX17Q92841 729 aaKnown RBP24.33■■□□□ 1.49
CLDND1-219ENST00000508659 SHPRHQ149N8 1683 aa24.33■■□□□ 1.49
CLDND1-219ENST00000508659 TRPM1Q7Z4N2 1603 aa24.32■■□□□ 1.48
CLDND1-219ENST00000508659 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
CLDND1-219ENST00000508659 MINK1Q8N4C8 1332 aaPredicted RBP24.32■■□□□ 1.48
CLDND1-219ENST00000508659 EIF3AQ14152 1382 aaKnown RBP24.31■■□□□ 1.48
CLDND1-219ENST00000508659 KIF1AQ12756 1690 aa24.31■■□□□ 1.48
CLDND1-219ENST00000508659 HIRIP3Q9BW71 556 aaPredicted RBP24.31■■□□□ 1.48
CLDND1-219ENST00000508659 NPHP3Q7Z494 1330 aa24.3■■□□□ 1.48
CLDND1-219ENST00000508659 ROCK2O75116 1388 aaKnown RBP24.29■■□□□ 1.48
CLDND1-219ENST00000508659 ANKARQ7Z5J8 1434 aa24.29■■□□□ 1.48
CLDND1-219ENST00000508659 SPATA31A6Q5VVP1 1343 aa24.29■■□□□ 1.48
CLDND1-219ENST00000508659 LRRC59Q96AG4 307 aaKnown RBP24.28■■□□□ 1.48
CLDND1-219ENST00000508659 TULP4Q9NRJ4 1543 aa24.27■■□□□ 1.48
CLDND1-219ENST00000508659 SOS2Q07890 1332 aaPredicted RBP24.26■■□□□ 1.47
CLDND1-219ENST00000508659 PNPLA6Q8IY17 1366 aa24.24■■□□□ 1.47
CLDND1-219ENST00000508659 PXDNQ92626 1479 aa24.24■■□□□ 1.47
CLDND1-219ENST00000508659 LRP6O75581 1613 aa24.24■■□□□ 1.47
CLDND1-219ENST00000508659 USP32Q8NFA0 1604 aa24.24■■□□□ 1.47
CLDND1-219ENST00000508659 WASLO00401 505 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-219ENST00000508659 FOXO3O43524 673 aa24.23■■□□□ 1.47
CLDND1-219ENST00000508659 CENPJQ9HC77 1338 aaPredicted RBP24.22■■□□□ 1.47
CLDND1-219ENST00000508659 RALGAPBQ86X10 1494 aa24.21■■□□□ 1.47
CLDND1-219ENST00000508659 NBPF8Q3BBV2 869 aa24.21■■□□□ 1.47
CLDND1-219ENST00000508659 PHF8Q9UPP1 1060 aa24.21■■□□□ 1.47
CLDND1-219ENST00000508659 XPCQ01831 940 aaPredicted RBP24.2■■□□□ 1.46
CLDND1-219ENST00000508659 QRICH2Q9H0J4 1663 aa24.2■■□□□ 1.46
CLDND1-219ENST00000508659 GPRASP1Q5JY77 1395 aa24.19■■□□□ 1.46
CLDND1-219ENST00000508659 CLSPNQ9HAW4 1339 aa24.19■■□□□ 1.46
CLDND1-219ENST00000508659 MEX3CQ5U5Q3 659 aaKnown RBP24.19■■□□□ 1.46
CLDND1-219ENST00000508659 ATP7BP35670 1465 aa24.19■■□□□ 1.46
CLDND1-219ENST00000508659 RGPD8O14715 1765 aaPredicted RBP24.18■■□□□ 1.46
CLDND1-219ENST00000508659 PRR36Q9H6K5 1346 aa24.17■■□□□ 1.46
CLDND1-219ENST00000508659 NUTM2BA6NNL0 878 aaPredicted RBP24.16■■□□□ 1.46
CLDND1-219ENST00000508659 NUTM2EB1AL46 878 aaPredicted RBP24.16■■□□□ 1.46
CLDND1-219ENST00000508659 NUTM2AQ8IVF1 878 aaPredicted RBP24.16■■□□□ 1.46
CLDND1-219ENST00000508659 ITSN1Q15811 1721 aa24.15■■□□□ 1.46
CLDND1-219ENST00000508659 COL22A1Q8NFW1 1626 aaPredicted RBP24.14■■□□□ 1.46
CLDND1-219ENST00000508659 PMFBP1Q8TBY8 1022 aa24.14■■□□□ 1.45
CLDND1-219ENST00000508659 ILDR2Q71H61 639 aa24.13■■□□□ 1.45
CLDND1-219ENST00000508659 CDK19Q9BWU1 502 aa24.13■■□□□ 1.45
CLDND1-219ENST00000508659 CARD11Q9BXL7 1154 aa24.13■■□□□ 1.45
CLDND1-219ENST00000508659 TNS3Q68CZ2 1445 aa24.12■■□□□ 1.45
CLDND1-219ENST00000508659 KRT28Q7Z3Y7 464 aa24.12■■□□□ 1.45
CLDND1-219ENST00000508659 PSME1Q06323 249 aa24.11■■□□□ 1.45
CLDND1-219ENST00000508659 NUDT16Q96DE0 195 aaKnown RBP24.11■■□□□ 1.45
CLDND1-219ENST00000508659 TOPAZ1Q8N9V7 1692 aa24.11■■□□□ 1.45
CLDND1-219ENST00000508659 SRPK2P78362 688 aaKnown RBP24.1■■□□□ 1.45
CLDND1-219ENST00000508659 CCER1Q8TC90 406 aaPredicted RBP24.1■■□□□ 1.45
CLDND1-219ENST00000508659 SPATA31A3Q5VYP0 1347 aa24.1■■□□□ 1.45
CLDND1-219ENST00000508659 SBNO1A3KN83 1393 aa24.09■■□□□ 1.45
CLDND1-219ENST00000508659 RGS17Q9UGC6 210 aaPredicted RBP24.08■■□□□ 1.45
CLDND1-219ENST00000508659 NGDNQ8NEJ9 315 aaKnown RBP24.07■■□□□ 1.44
CLDND1-219ENST00000508659 ARHGEF10O15013 1369 aa24.05■■□□□ 1.44
CLDND1-219ENST00000508659 CCDC61Q9Y6R9 512 aa24.05■■□□□ 1.44
CLDND1-219ENST00000508659 EVC2Q86UK5 1308 aa24.05■■□□□ 1.44
CLDND1-219ENST00000508659 SBNO2Q9Y2G9 1366 aa24.04■■□□□ 1.44
CLDND1-219ENST00000508659 ADAMTS2O95450 1211 aa24.04■■□□□ 1.44
CLDND1-219ENST00000508659 C8orf37Q96NL8 207 aa24.04■■□□□ 1.44
CLDND1-219ENST00000508659 CABP2Q9NPB3 220 aa24.04■■□□□ 1.44
CLDND1-219ENST00000508659 TIMELESSQ9UNS1 1208 aa24.04■■□□□ 1.44
CLDND1-219ENST00000508659 PPIP5K1Q6PFW1 1433 aa24.03■■□□□ 1.44
CLDND1-219ENST00000508659 TRPM3Q9HCF6 1732 aaPredicted RBP24.03■■□□□ 1.44
CLDND1-219ENST00000508659 ZNF772Q68DY9 489 aaPredicted RBP24.02■■□□□ 1.44
CLDND1-219ENST00000508659 LMOD2Q6P5Q4 547 aa24.02■■□□□ 1.44
CLDND1-219ENST00000508659 POLR3AO14802 1390 aaPredicted RBP24.01■■□□□ 1.43
CLDND1-219ENST00000508659 AFF2P51816 1311 aa24■■□□□ 1.43
CLDND1-219ENST00000508659 POTEAQ6S8J7 498 aa23.99■■□□□ 1.43
CLDND1-219ENST00000508659 HAP1P54257 671 aaPredicted RBP23.98■■□□□ 1.43
CLDND1-219ENST00000508659 ACEP12821 1306 aa23.98■■□□□ 1.43
CLDND1-219ENST00000508659 ALS2Q96Q42 1657 aa23.98■■□□□ 1.43
CLDND1-219ENST00000508659 PLEKHG3A1L390 1219 aa23.97■■□□□ 1.43
CLDND1-219ENST00000508659 PAK3O75914 559 aaPredicted RBP23.97■■□□□ 1.43
CLDND1-219ENST00000508659 ATAD2Q6PL18 1390 aa23.96■■□□□ 1.43
CLDND1-219ENST00000508659 NGLY1Q96IV0 654 aa23.96■■□□□ 1.43
CLDND1-219ENST00000508659 ABCA3Q99758 1704 aa23.96■■□□□ 1.43
CLDND1-219ENST00000508659 PLEKHG5O94827 1062 aa23.95■■□□□ 1.42
CLDND1-219ENST00000508659 USP47Q96K76 1375 aa23.93■■□□□ 1.42
CLDND1-219ENST00000508659 MARF1Q9Y4F3 1742 aaKnown RBP23.93■■□□□ 1.42
CLDND1-219ENST00000508659 CABLES1Q8TDN4 633 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms