RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 PROSER2Q86WR7 435 aaPredicted RBP29.25■■■□□ 2.27
HOXC9-203ENST00000508190 LRRC7Q96NW7 1537 aa29.25■■■□□ 2.27
HOXC9-203ENST00000508190 TESK2Q96S53 571 aa29.25■■■□□ 2.27
HOXC9-203ENST00000508190 MINK1Q8N4C8 1332 aaPredicted RBP29.24■■■□□ 2.27
HOXC9-203ENST00000508190 ADGRB2O60241 1585 aa29.22■■■□□ 2.27
HOXC9-203ENST00000508190 TMEM94Q12767 1356 aa29.21■■■□□ 2.27
HOXC9-203ENST00000508190 SBNO2Q9Y2G9 1366 aa29.21■■■□□ 2.27
HOXC9-203ENST00000508190 TULP4Q9NRJ4 1543 aa29.21■■■□□ 2.27
HOXC9-203ENST00000508190 ADGRL3Q9HAR2 1447 aa29.17■■■□□ 2.26
HOXC9-203ENST00000508190 DISP3Q9P2K9 1392 aa29.17■■■□□ 2.26
HOXC9-203ENST00000508190 CDC42BPGQ6DT37 1551 aa29.14■■■□□ 2.25
HOXC9-203ENST00000508190 C14orf37Q86TY3 774 aa29.14■■■□□ 2.25
HOXC9-203ENST00000508190 FMN2Q9NZ56 1722 aa29.14■■■□□ 2.25
HOXC9-203ENST00000508190 RGPD8O14715 1765 aaPredicted RBP29.13■■■□□ 2.25
HOXC9-203ENST00000508190 NCOA3Q9Y6Q9 1424 aa29.12■■■□□ 2.25
HOXC9-203ENST00000508190 C11orf95C9JLR9 678 aaPredicted RBP29.12■■■□□ 2.25
HOXC9-203ENST00000508190 TMF1P82094 1093 aa29.1■■■□□ 2.25
HOXC9-203ENST00000508190 EVC2Q86UK5 1308 aa29.09■■■□□ 2.25
HOXC9-203ENST00000508190 USP32Q8NFA0 1604 aa29.07■■■□□ 2.24
HOXC9-203ENST00000508190 WASLO00401 505 aaPredicted RBP29.07■■■□□ 2.24
HOXC9-203ENST00000508190 CDK19Q9BWU1 502 aa29.07■■■□□ 2.24
HOXC9-203ENST00000508190 MSH6P52701 1360 aa29.05■■■□□ 2.24
HOXC9-203ENST00000508190 MYOM1P52179 1685 aa29.05■■■□□ 2.24
HOXC9-203ENST00000508190 ZNF316A6NFI3 1004 aaPredicted RBP29.04■■■□□ 2.24
HOXC9-203ENST00000508190 C19orf44Q9H6X5 657 aa29.04■■■□□ 2.24
HOXC9-203ENST00000508190 CABP2Q9NPB3 220 aa29.04■■■□□ 2.24
HOXC9-203ENST00000508190 SLC24A1O60721 1099 aa29.04■■■□□ 2.24
HOXC9-203ENST00000508190 KIF7Q2M1P5 1343 aa29.04■■■□□ 2.24
HOXC9-203ENST00000508190 SRPK2P78362 688 aaKnown RBP29.03■■■□□ 2.24
HOXC9-203ENST00000508190 TOPAZ1Q8N9V7 1692 aa29.02■■■□□ 2.24
HOXC9-203ENST00000508190 POLR3GLQ9BT43 218 aa29.02■■■□□ 2.24
HOXC9-203ENST00000508190 WASHC2AQ641Q2 1341 aa29.02■■■□□ 2.24
HOXC9-203ENST00000508190 DCCP43146 1447 aa29.02■■■□□ 2.24
HOXC9-203ENST00000508190 ITSN1Q15811 1721 aa29.01■■■□□ 2.24
HOXC9-203ENST00000508190 NUTM2FA1L443 756 aa29.01■■■□□ 2.23
HOXC9-203ENST00000508190 CCDC7Q96M83 1385 aa29.01■■■□□ 2.23
HOXC9-203ENST00000508190 ATP7BP35670 1465 aa29■■■□□ 2.23
HOXC9-203ENST00000508190 PRR36Q9H6K5 1346 aa28.99■■■□□ 2.23
HOXC9-203ENST00000508190 CDCA8Q53HL2 280 aa28.97■■■□□ 2.23
HOXC9-203ENST00000508190 ATF3P18847 181 aa28.96■■■□□ 2.23
HOXC9-203ENST00000508190 MST1RQ04912 1400 aa28.95■■■□□ 2.22
HOXC9-203ENST00000508190 NUDT16Q96DE0 195 aaKnown RBP28.94■■■□□ 2.22
HOXC9-203ENST00000508190 ANKARQ7Z5J8 1434 aa28.94■■■□□ 2.22
HOXC9-203ENST00000508190 ATAD2Q6PL18 1390 aa28.93■■■□□ 2.22
HOXC9-203ENST00000508190 CADPS2Q86UW7 1296 aa28.93■■■□□ 2.22
HOXC9-203ENST00000508190 PUS7Q96PZ0 661 aaKnown RBP28.93■■■□□ 2.22
HOXC9-203ENST00000508190 C1orf167Q5SNV9 1468 aa28.91■■■□□ 2.22
HOXC9-203ENST00000508190 IQSEC2Q5JU85 1478 aa28.89■■■□□ 2.22
HOXC9-203ENST00000508190 PPIP5K1Q6PFW1 1433 aa28.89■■■□□ 2.22
HOXC9-203ENST00000508190 CERKQ8TCT0 537 aa28.89■■■□□ 2.21
HOXC9-203ENST00000508190 AKAP12Q02952 1782 aa28.88■■■□□ 2.21
HOXC9-203ENST00000508190 TMC1Q8TDI8 760 aa28.87■■■□□ 2.21
HOXC9-203ENST00000508190 CCDC61Q9Y6R9 512 aa28.86■■■□□ 2.21
HOXC9-203ENST00000508190 SLC12A5Q9H2X9 1139 aa28.85■■■□□ 2.21
HOXC9-203ENST00000508190 KIF1AQ12756 1690 aa28.85■■■□□ 2.21
HOXC9-203ENST00000508190 CABP1Q9NZU7 370 aa28.84■■■□□ 2.21
HOXC9-203ENST00000508190 ESCO1Q5FWF5 840 aa28.83■■■□□ 2.21
HOXC9-203ENST00000508190 ORAI2Q96SN7 254 aa28.83■■■□□ 2.21
HOXC9-203ENST00000508190 CD163L1Q9NR16 1453 aa28.82■■■□□ 2.2
HOXC9-203ENST00000508190 SLAIN2Q9P270 581 aa28.82■■■□□ 2.2
HOXC9-203ENST00000508190 NINLQ9Y2I6 1382 aa28.82■■■□□ 2.2
HOXC9-203ENST00000508190 PMFBP1Q8TBY8 1022 aa28.81■■■□□ 2.2
HOXC9-203ENST00000508190 MON2Q7Z3U7 1717 aa28.81■■■□□ 2.2
HOXC9-203ENST00000508190 ROBO1Q9Y6N7 1651 aa28.8■■■□□ 2.2
HOXC9-203ENST00000508190 DDX10Q13206 875 aaKnown RBP28.79■■■□□ 2.2
HOXC9-203ENST00000508190 PLEKHG3A1L390 1219 aa28.78■■■□□ 2.2
HOXC9-203ENST00000508190 PHF8Q9UPP1 1060 aa28.78■■■□□ 2.2
HOXC9-203ENST00000508190 A0A1W2PP64 1363 aa28.76■■■□□ 2.19
HOXC9-203ENST00000508190 ACEP12821 1306 aa28.75■■■□□ 2.19
HOXC9-203ENST00000508190 ANKRD36BQ8N2N9 1353 aa28.75■■■□□ 2.19
HOXC9-203ENST00000508190 BRINP3Q76B58 766 aa28.74■■■□□ 2.19
HOXC9-203ENST00000508190 PANK3Q9H999 370 aa28.74■■■□□ 2.19
HOXC9-203ENST00000508190 CPSF1Q10570 1443 aaKnown RBP28.74■■■□□ 2.19
HOXC9-203ENST00000508190 POLR3AO14802 1390 aaPredicted RBP28.74■■■□□ 2.19
HOXC9-203ENST00000508190 UBAP1LF5GYI3 381 aa28.74■■■□□ 2.19
HOXC9-203ENST00000508190 NRKQ7Z2Y5 1582 aa28.73■■■□□ 2.19
HOXC9-203ENST00000508190 TOM1O60784 492 aa28.73■■■□□ 2.19
HOXC9-203ENST00000508190 NHSL1Q5SYE7 1610 aa28.73■■■□□ 2.19
HOXC9-203ENST00000508190 NGDNQ8NEJ9 315 aaKnown RBP28.72■■■□□ 2.19
HOXC9-203ENST00000508190 TERF2IPQ9NYB0 399 aa28.71■■■□□ 2.19
HOXC9-203ENST00000508190 HDGFL2Q7Z4V5 671 aaPredicted RBP28.69■■■□□ 2.18
HOXC9-203ENST00000508190 KTN1Q86UP2 1357 aaKnown RBP28.69■■■□□ 2.18
HOXC9-203ENST00000508190 TRPM3Q9HCF6 1732 aaPredicted RBP28.69■■■□□ 2.18
HOXC9-203ENST00000508190 FOXO3O43524 673 aa28.69■■■□□ 2.18
HOXC9-203ENST00000508190 DDX17Q92841 729 aaKnown RBP28.69■■■□□ 2.18
HOXC9-203ENST00000508190 PIP4K2BP78356 416 aa28.68■■■□□ 2.18
HOXC9-203ENST00000508190 CARD14Q9BXL6 1004 aa28.68■■■□□ 2.18
HOXC9-203ENST00000508190 KIF20BQ96Q89 1820 aa28.67■■■□□ 2.18
HOXC9-203ENST00000508190 USP6P35125 1406 aa28.67■■■□□ 2.18
HOXC9-203ENST00000508190 NSD3Q9BZ95 1437 aa28.67■■■□□ 2.18
HOXC9-203ENST00000508190 XPCQ01831 940 aaPredicted RBP28.65■■■□□ 2.18
HOXC9-203ENST00000508190 SCAF1Q9H7N4 1312 aaKnown RBP28.64■■■□□ 2.18
HOXC9-203ENST00000508190 ZNF692Q9BU19 519 aaPredicted RBP28.64■■■□□ 2.17
HOXC9-203ENST00000508190 PXDNQ92626 1479 aa28.63■■■□□ 2.17
HOXC9-203ENST00000508190 EDC4Q6P2E9 1401 aaKnown RBP28.62■■■□□ 2.17
HOXC9-203ENST00000508190 PSME1Q06323 249 aa28.62■■■□□ 2.17
HOXC9-203ENST00000508190 PHLPP1O60346 1717 aa28.62■■■□□ 2.17
HOXC9-203ENST00000508190 AHDC1Q5TGY3 1603 aaPredicted RBP28.61■■■□□ 2.17
HOXC9-203ENST00000508190 NPHP3Q7Z494 1330 aa28.61■■■□□ 2.17
HOXC9-203ENST00000508190 SSH2Q76I76 1423 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms