RNA–Protein interactions for RNA: ENST00000508099.5

LINC02428-201, Transcript of long intergenic non-protein coding RNA 2428, humanhuman

TSL 5 BASIC

Gene LINC02428, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02428-201ENST00000508099 NLRP7Q8WX94 980 aa11.62□□□□□ -0.55
LINC02428-201ENST00000508099 GMPR2Q9P2T1 348 aaKnown RBP11.62□□□□□ -0.55
LINC02428-201ENST00000508099 C11orf95C9JLR9 678 aaPredicted RBP11.61□□□□□ -0.55
LINC02428-201ENST00000508099 TTC24A2A3L6 582 aaPredicted RBP11.6□□□□□ -0.55
LINC02428-201ENST00000508099 GRIPAP1Q4V328 841 aa11.6□□□□□ -0.55
LINC02428-201ENST00000508099 WNT7AO00755 349 aa11.58□□□□□ -0.56
LINC02428-201ENST00000508099 WFS1O76024 890 aa11.58□□□□□ -0.56
LINC02428-201ENST00000508099 RNF19BQ6ZMZ0 732 aa11.58□□□□□ -0.56
LINC02428-201ENST00000508099 PHOX2BQ99453 314 aa11.57□□□□□ -0.56
LINC02428-201ENST00000508099 Q3C1V9 767 aa11.56□□□□□ -0.56
LINC02428-201ENST00000508099 TRIM32Q13049 653 aa11.55□□□□□ -0.56
LINC02428-201ENST00000508099 SNIP1Q8TAD8 396 aaKnown RBP11.55□□□□□ -0.56
LINC02428-201ENST00000508099 MMP16P51512 607 aa11.54□□□□□ -0.56
LINC02428-201ENST00000508099 SMPD1P17405 629 aa11.53□□□□□ -0.56
LINC02428-201ENST00000508099 NFX1Q12986 1120 aaKnown RBP11.52□□□□□ -0.57
LINC02428-201ENST00000508099 ATP13A2Q9NQ11 1180 aa11.51□□□□□ -0.57
LINC02428-201ENST00000508099 GPIHBP1Q8IV16 184 aa11.5□□□□□ -0.57
LINC02428-201ENST00000508099 MRGPRX2Q96LB1 330 aa11.5□□□□□ -0.57
LINC02428-201ENST00000508099 REPIN1Q9BWE0 567 aaKnown RBP11.5□□□□□ -0.57
LINC02428-201ENST00000508099 WIPF1O43516 503 aa11.49□□□□□ -0.57
LINC02428-201ENST00000508099 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
LINC02428-201ENST00000508099 CD46P15529 392 aa11.48□□□□□ -0.57
LINC02428-201ENST00000508099 USB1Q9BQ65 265 aaKnown RBP11.48□□□□□ -0.57
LINC02428-201ENST00000508099 SENP2Q9HC62 589 aa11.48□□□□□ -0.57
LINC02428-201ENST00000508099 STK17AQ9UEE5 414 aa11.48□□□□□ -0.57
LINC02428-201ENST00000508099 J3QL48 77 aa11.46□□□□□ -0.57
LINC02428-201ENST00000508099 INSM1Q01101 510 aaPredicted RBP11.46□□□□□ -0.57
LINC02428-201ENST00000508099 TRIM47Q96LD4 638 aa11.46□□□□□ -0.57
LINC02428-201ENST00000508099 KDM4AO75164 1064 aa11.45□□□□□ -0.58
LINC02428-201ENST00000508099 SNRPBP14678 240 aaKnown RBP11.44□□□□□ -0.58
LINC02428-201ENST00000508099 USP46P62068 366 aa11.43□□□□□ -0.58
LINC02428-201ENST00000508099 WNT7BP56706 349 aa11.42□□□□□ -0.58
LINC02428-201ENST00000508099 KIFC2Q96AC6 838 aa11.42□□□□□ -0.58
LINC02428-201ENST00000508099 TERTO14746 1132 aaKnown RBP11.41□□□□□ -0.58
LINC02428-201ENST00000508099 MAP2K5Q13163 448 aa11.41□□□□□ -0.58
LINC02428-201ENST00000508099 HPS1Q92902 700 aa11.41□□□□□ -0.58
LINC02428-201ENST00000508099 RC3H1Q5TC82 1133 aaKnown RBP11.4□□□□□ -0.58
LINC02428-201ENST00000508099 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
LINC02428-201ENST00000508099 HOXA2O43364 376 aa11.37□□□□□ -0.59
LINC02428-201ENST00000508099 SKOR1P84550 965 aa11.37□□□□□ -0.59
LINC02428-201ENST00000508099 LCE2CQ5TA81 110 aa11.37□□□□□ -0.59
LINC02428-201ENST00000508099 HLA-CQ95604 372 aa11.36□□□□□ -0.59
LINC02428-201ENST00000508099 BCANQ96GW7 911 aa11.36□□□□□ -0.59
LINC02428-201ENST00000508099 JUNDP17535 347 aa11.35□□□□□ -0.59
LINC02428-201ENST00000508099 MDM2Q00987 491 aaPredicted RBP11.35□□□□□ -0.59
LINC02428-201ENST00000508099 IRF6O14896 467 aa11.33□□□□□ -0.6
LINC02428-201ENST00000508099 ALDH1A1P00352 501 aa11.32□□□□□ -0.6
LINC02428-201ENST00000508099 MINK1Q8N4C8 1332 aaPredicted RBP11.31□□□□□ -0.6
LINC02428-201ENST00000508099 SLC16A10Q8TF71 515 aa11.3□□□□□ -0.6
LINC02428-201ENST00000508099 GUCA2AQ02747 115 aa11.29□□□□□ -0.6
LINC02428-201ENST00000508099 RETREG3Q86VR2 466 aa11.29□□□□□ -0.6
LINC02428-201ENST00000508099 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
LINC02428-201ENST00000508099 NUDT12Q9BQG2 462 aa11.28□□□□□ -0.6
LINC02428-201ENST00000508099 TULP1O00294 542 aaPredicted RBP11.27□□□□□ -0.61
LINC02428-201ENST00000508099 SIAH2O43255 324 aa11.27□□□□□ -0.61
LINC02428-201ENST00000508099 CLCN1P35523 988 aa11.26□□□□□ -0.61
LINC02428-201ENST00000508099 SYMPKQ92797 1274 aaKnown RBP11.26□□□□□ -0.61
LINC02428-201ENST00000508099 GPCPD1Q9NPB8 672 aa11.26□□□□□ -0.61
LINC02428-201ENST00000508099 NXF1Q9UBU9 619 aaKnown RBP11.26□□□□□ -0.61
LINC02428-201ENST00000508099 NUTM1Q86Y26 1132 aa11.25□□□□□ -0.61
LINC02428-201ENST00000508099 NPAS3Q8IXF0 933 aa11.25□□□□□ -0.61
LINC02428-201ENST00000508099 CCDC102AQ96A19 550 aa11.25□□□□□ -0.61
LINC02428-201ENST00000508099 FAM217BQ9NTX9 383 aaPredicted RBP11.25□□□□□ -0.61
LINC02428-201ENST00000508099 WASF2Q9Y6W5 498 aa11.25□□□□□ -0.61
LINC02428-201ENST00000508099 FAM181BA6NEQ2 426 aa11.24□□□□□ -0.61
LINC02428-201ENST00000508099 PTCRAQ6ISU1 281 aaPredicted RBP11.24□□□□□ -0.61
LINC02428-201ENST00000508099 CAPN5O15484 640 aaPredicted RBP11.23□□□□□ -0.61
LINC02428-201ENST00000508099 BMP1P13497 986 aa11.23□□□□□ -0.61
LINC02428-201ENST00000508099 TRIM46Q7Z4K8 759 aa11.23□□□□□ -0.61
LINC02428-201ENST00000508099 CCNYL3P0C7X3 344 aa11.21□□□□□ -0.61
LINC02428-201ENST00000508099 MS4A1P11836 297 aa11.21□□□□□ -0.61
LINC02428-201ENST00000508099 IRF7Q92985 503 aa11.21□□□□□ -0.61
LINC02428-201ENST00000508099 FDX1P10109 184 aa11.2□□□□□ -0.62
LINC02428-201ENST00000508099 SH3BP2P78314 561 aa11.2□□□□□ -0.62
LINC02428-201ENST00000508099 GMPRP36959 345 aa11.19□□□□□ -0.62
LINC02428-201ENST00000508099 C6orf229H3BNL8 230 aa11.18□□□□□ -0.62
LINC02428-201ENST00000508099 KRI1Q8N9T8 703 aaKnown RBP11.18□□□□□ -0.62
LINC02428-201ENST00000508099 PCDHGC3Q9UN70 934 aa11.18□□□□□ -0.62
LINC02428-201ENST00000508099 PTPRNQ16849 979 aa11.17□□□□□ -0.62
LINC02428-201ENST00000508099 H3BM21 787 aa11.16□□□□□ -0.62
LINC02428-201ENST00000508099 ZSCAN1Q8NBB4 408 aa11.16□□□□□ -0.62
LINC02428-201ENST00000508099 UNC93B1Q9H1C4 597 aa11.16□□□□□ -0.62
LINC02428-201ENST00000508099 EVA1BQ9NVM1 165 aa11.14□□□□□ -0.63
LINC02428-201ENST00000508099 LORP23490 312 aaPredicted RBP11.13□□□□□ -0.63
LINC02428-201ENST00000508099 MPNDQ8N594 471 aa11.13□□□□□ -0.63
LINC02428-201ENST00000508099 TLL2Q9Y6L7 1015 aa11.13□□□□□ -0.63
LINC02428-201ENST00000508099 PLEKHG3A1L390 1219 aa11.12□□□□□ -0.63
LINC02428-201ENST00000508099 LINC01559Q495D7 138 aa11.12□□□□□ -0.63
LINC02428-201ENST00000508099 ZFP42Q96MM3 310 aa11.12□□□□□ -0.63
LINC02428-201ENST00000508099 VARSP26640 1264 aaKnown RBP11.11□□□□□ -0.63
LINC02428-201ENST00000508099 VEGFBP49765 207 aa11.11□□□□□ -0.63
LINC02428-201ENST00000508099 KCNH2Q12809 1159 aa11.11□□□□□ -0.63
LINC02428-201ENST00000508099 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC02428-201ENST00000508099 ZNF511Q8NB15 262 aa11.1□□□□□ -0.63
LINC02428-201ENST00000508099 SPIRE2Q8WWL2 714 aa11.1□□□□□ -0.63
LINC02428-201ENST00000508099 BAP1Q92560 729 aa11.1□□□□□ -0.63
LINC02428-201ENST00000508099 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
LINC02428-201ENST00000508099 NNTQ13423 1086 aa11.09□□□□□ -0.63
LINC02428-201ENST00000508099 DESI1Q6ICB0 168 aa11.09□□□□□ -0.63
LINC02428-201ENST00000508099 SPDYE5A6NIY4 337 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms