RNA–Protein interactions for RNA: ENST00000508099.5

LINC02428-201, Transcript of long intergenic non-protein coding RNA 2428, humanhuman

TSL 5 BASIC

Gene LINC02428, Length 527 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02428-201ENST00000508099 NLRP7Q8WX94 980 aa11.62□□□□□ -0.55
LINC02428-201ENST00000508099 GMPR2Q9P2T1 348 aaKnown RBP11.62□□□□□ -0.55
LINC02428-201ENST00000508099 C11orf95C9JLR9 678 aaPredicted RBP11.61□□□□□ -0.55
LINC02428-201ENST00000508099 TTC24A2A3L6 582 aaPredicted RBP11.6□□□□□ -0.55
LINC02428-201ENST00000508099 GRIPAP1Q4V328 841 aa11.6□□□□□ -0.55
LINC02428-201ENST00000508099 WNT7AO00755 349 aa11.58□□□□□ -0.56
LINC02428-201ENST00000508099 WFS1O76024 890 aa11.58□□□□□ -0.56
LINC02428-201ENST00000508099 RNF19BQ6ZMZ0 732 aa11.58□□□□□ -0.56
LINC02428-201ENST00000508099 PHOX2BQ99453 314 aa11.57□□□□□ -0.56
LINC02428-201ENST00000508099 Q3C1V9 767 aa11.56□□□□□ -0.56
LINC02428-201ENST00000508099 TRIM32Q13049 653 aa11.55□□□□□ -0.56
LINC02428-201ENST00000508099 SNIP1Q8TAD8 396 aaKnown RBP11.55□□□□□ -0.56
LINC02428-201ENST00000508099 MMP16P51512 607 aa11.54□□□□□ -0.56
LINC02428-201ENST00000508099 SMPD1P17405 629 aa11.53□□□□□ -0.56
LINC02428-201ENST00000508099 NFX1Q12986 1120 aaKnown RBP11.52□□□□□ -0.57
LINC02428-201ENST00000508099 ATP13A2Q9NQ11 1180 aa11.51□□□□□ -0.57
LINC02428-201ENST00000508099 GPIHBP1Q8IV16 184 aa11.5□□□□□ -0.57
LINC02428-201ENST00000508099 MRGPRX2Q96LB1 330 aa11.5□□□□□ -0.57
LINC02428-201ENST00000508099 REPIN1Q9BWE0 567 aaKnown RBP11.5□□□□□ -0.57
LINC02428-201ENST00000508099 WIPF1O43516 503 aa11.49□□□□□ -0.57
LINC02428-201ENST00000508099 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
LINC02428-201ENST00000508099 CD46P15529 392 aa11.48□□□□□ -0.57
LINC02428-201ENST00000508099 USB1Q9BQ65 265 aaKnown RBP11.48□□□□□ -0.57
LINC02428-201ENST00000508099 SENP2Q9HC62 589 aa11.48□□□□□ -0.57
LINC02428-201ENST00000508099 STK17AQ9UEE5 414 aa11.48□□□□□ -0.57
LINC02428-201ENST00000508099 J3QL48 77 aa11.46□□□□□ -0.57
LINC02428-201ENST00000508099 INSM1Q01101 510 aaPredicted RBP11.46□□□□□ -0.57
LINC02428-201ENST00000508099 TRIM47Q96LD4 638 aa11.46□□□□□ -0.57
LINC02428-201ENST00000508099 KDM4AO75164 1064 aa11.45□□□□□ -0.58
LINC02428-201ENST00000508099 SNRPBP14678 240 aaKnown RBP11.44□□□□□ -0.58
LINC02428-201ENST00000508099 USP46P62068 366 aa11.43□□□□□ -0.58
LINC02428-201ENST00000508099 WNT7BP56706 349 aa11.42□□□□□ -0.58
LINC02428-201ENST00000508099 KIFC2Q96AC6 838 aa11.42□□□□□ -0.58
LINC02428-201ENST00000508099 TERTO14746 1132 aaKnown RBP11.41□□□□□ -0.58
LINC02428-201ENST00000508099 MAP2K5Q13163 448 aa11.41□□□□□ -0.58
LINC02428-201ENST00000508099 HPS1Q92902 700 aa11.41□□□□□ -0.58
LINC02428-201ENST00000508099 RC3H1Q5TC82 1133 aaKnown RBP11.4□□□□□ -0.58
LINC02428-201ENST00000508099 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
LINC02428-201ENST00000508099 HOXA2O43364 376 aa11.37□□□□□ -0.59
LINC02428-201ENST00000508099 SKOR1P84550 965 aa11.37□□□□□ -0.59
LINC02428-201ENST00000508099 LCE2CQ5TA81 110 aa11.37□□□□□ -0.59
LINC02428-201ENST00000508099 HLA-CQ95604 372 aa11.36□□□□□ -0.59
LINC02428-201ENST00000508099 BCANQ96GW7 911 aa11.36□□□□□ -0.59
LINC02428-201ENST00000508099 JUNDP17535 347 aa11.35□□□□□ -0.59
LINC02428-201ENST00000508099 MDM2Q00987 491 aaPredicted RBP11.35□□□□□ -0.59
LINC02428-201ENST00000508099 IRF6O14896 467 aa11.33□□□□□ -0.6
LINC02428-201ENST00000508099 ALDH1A1P00352 501 aa11.32□□□□□ -0.6
LINC02428-201ENST00000508099 MINK1Q8N4C8 1332 aaPredicted RBP11.31□□□□□ -0.6
LINC02428-201ENST00000508099 SLC16A10Q8TF71 515 aa11.3□□□□□ -0.6
LINC02428-201ENST00000508099 GUCA2AQ02747 115 aa11.29□□□□□ -0.6
LINC02428-201ENST00000508099 RETREG3Q86VR2 466 aa11.29□□□□□ -0.6
LINC02428-201ENST00000508099 EHBP1Q8NDI1 1231 aa11.28□□□□□ -0.6
LINC02428-201ENST00000508099 NUDT12Q9BQG2 462 aa11.28□□□□□ -0.6
LINC02428-201ENST00000508099 TULP1O00294 542 aaPredicted RBP11.27□□□□□ -0.61
LINC02428-201ENST00000508099 SIAH2O43255 324 aa11.27□□□□□ -0.61
LINC02428-201ENST00000508099 CLCN1P35523 988 aa11.26□□□□□ -0.61
LINC02428-201ENST00000508099 SYMPKQ92797 1274 aaKnown RBP11.26□□□□□ -0.61
LINC02428-201ENST00000508099 GPCPD1Q9NPB8 672 aa11.26□□□□□ -0.61
LINC02428-201ENST00000508099 NXF1Q9UBU9 619 aaKnown RBP11.26□□□□□ -0.61
LINC02428-201ENST00000508099 NUTM1Q86Y26 1132 aa11.25□□□□□ -0.61
LINC02428-201ENST00000508099 NPAS3Q8IXF0 933 aa11.25□□□□□ -0.61
LINC02428-201ENST00000508099 CCDC102AQ96A19 550 aa11.25□□□□□ -0.61
LINC02428-201ENST00000508099 FAM217BQ9NTX9 383 aaPredicted RBP11.25□□□□□ -0.61
LINC02428-201ENST00000508099 WASF2Q9Y6W5 498 aa11.25□□□□□ -0.61
LINC02428-201ENST00000508099 FAM181BA6NEQ2 426 aa11.24□□□□□ -0.61
LINC02428-201ENST00000508099 PTCRAQ6ISU1 281 aaPredicted RBP11.24□□□□□ -0.61
LINC02428-201ENST00000508099 CAPN5O15484 640 aaPredicted RBP11.23□□□□□ -0.61
LINC02428-201ENST00000508099 BMP1P13497 986 aa11.23□□□□□ -0.61
LINC02428-201ENST00000508099 TRIM46Q7Z4K8 759 aa11.23□□□□□ -0.61
LINC02428-201ENST00000508099 CCNYL3P0C7X3 344 aa11.21□□□□□ -0.61
LINC02428-201ENST00000508099 MS4A1P11836 297 aa11.21□□□□□ -0.61
LINC02428-201ENST00000508099 IRF7Q92985 503 aa11.21□□□□□ -0.61
LINC02428-201ENST00000508099 FDX1P10109 184 aa11.2□□□□□ -0.62
LINC02428-201ENST00000508099 SH3BP2P78314 561 aa11.2□□□□□ -0.62
LINC02428-201ENST00000508099 GMPRP36959 345 aa11.19□□□□□ -0.62
LINC02428-201ENST00000508099 C6orf229H3BNL8 230 aa11.18□□□□□ -0.62
LINC02428-201ENST00000508099 KRI1Q8N9T8 703 aaKnown RBP11.18□□□□□ -0.62
LINC02428-201ENST00000508099 PCDHGC3Q9UN70 934 aa11.18□□□□□ -0.62
LINC02428-201ENST00000508099 PTPRNQ16849 979 aa11.17□□□□□ -0.62
LINC02428-201ENST00000508099 H3BM21 787 aa11.16□□□□□ -0.62
LINC02428-201ENST00000508099 ZSCAN1Q8NBB4 408 aa11.16□□□□□ -0.62
LINC02428-201ENST00000508099 UNC93B1Q9H1C4 597 aa11.16□□□□□ -0.62
LINC02428-201ENST00000508099 EVA1BQ9NVM1 165 aa11.14□□□□□ -0.63
LINC02428-201ENST00000508099 LORP23490 312 aaPredicted RBP11.13□□□□□ -0.63
LINC02428-201ENST00000508099 MPNDQ8N594 471 aa11.13□□□□□ -0.63
LINC02428-201ENST00000508099 TLL2Q9Y6L7 1015 aa11.13□□□□□ -0.63
LINC02428-201ENST00000508099 PLEKHG3A1L390 1219 aa11.12□□□□□ -0.63
LINC02428-201ENST00000508099 LINC01559Q495D7 138 aa11.12□□□□□ -0.63
LINC02428-201ENST00000508099 ZFP42Q96MM3 310 aa11.12□□□□□ -0.63
LINC02428-201ENST00000508099 VARSP26640 1264 aaKnown RBP11.11□□□□□ -0.63
LINC02428-201ENST00000508099 VEGFBP49765 207 aa11.11□□□□□ -0.63
LINC02428-201ENST00000508099 KCNH2Q12809 1159 aa11.11□□□□□ -0.63
LINC02428-201ENST00000508099 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC02428-201ENST00000508099 ZNF511Q8NB15 262 aa11.1□□□□□ -0.63
LINC02428-201ENST00000508099 SPIRE2Q8WWL2 714 aa11.1□□□□□ -0.63
LINC02428-201ENST00000508099 BAP1Q92560 729 aa11.1□□□□□ -0.63
LINC02428-201ENST00000508099 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
LINC02428-201ENST00000508099 NNTQ13423 1086 aa11.09□□□□□ -0.63
LINC02428-201ENST00000508099 DESI1Q6ICB0 168 aa11.09□□□□□ -0.63
LINC02428-201ENST00000508099 SPDYE5A6NIY4 337 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms