RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-208ENST00000507292 ZBTB24O43167 697 aaPredicted RBP6.58□□□□□ -1.36
SRPK1-208ENST00000507292 KDM4AO75164 1064 aa6.58□□□□□ -1.36
SRPK1-208ENST00000507292 Q3C1V9 767 aa6.58□□□□□ -1.36
SRPK1-208ENST00000507292 CYP4X1Q8N118 509 aa6.58□□□□□ -1.36
SRPK1-208ENST00000507292 VSIG10Q8N0Z9 540 aa6.57□□□□□ -1.36
SRPK1-208ENST00000507292 TOR4AQ9NXH8 423 aa6.57□□□□□ -1.36
SRPK1-208ENST00000507292 MINK1Q8N4C8 1332 aaPredicted RBP6.56□□□□□ -1.36
SRPK1-208ENST00000507292 CCDC102AQ96A19 550 aa6.56□□□□□ -1.36
SRPK1-208ENST00000507292 USB1Q9BQ65 265 aaKnown RBP6.56□□□□□ -1.36
SRPK1-208ENST00000507292 DACH1Q9UI36 760 aa6.56□□□□□ -1.36
SRPK1-208ENST00000507292 MMP16P51512 607 aa6.55□□□□□ -1.36
SRPK1-208ENST00000507292 GUCA2AQ02747 115 aa6.55□□□□□ -1.36
SRPK1-208ENST00000507292 TTC24A2A3L6 582 aaPredicted RBP6.54□□□□□ -1.36
SRPK1-208ENST00000507292 HOXA2O43364 376 aa6.54□□□□□ -1.36
SRPK1-208ENST00000507292 TRIM32Q13049 653 aa6.54□□□□□ -1.36
SRPK1-208ENST00000507292 CCDC24Q8N4L8 307 aa6.54□□□□□ -1.36
SRPK1-208ENST00000507292 AXIN1O15169 862 aa6.53□□□□□ -1.36
SRPK1-208ENST00000507292 DXOO77932 396 aaKnown RBP6.53□□□□□ -1.36
SRPK1-208ENST00000507292 AVPP01185 164 aa6.53□□□□□ -1.36
SRPK1-208ENST00000507292 USP46P62068 366 aa6.53□□□□□ -1.36
SRPK1-208ENST00000507292 SYMPKQ92797 1274 aaKnown RBP6.53□□□□□ -1.36
SRPK1-208ENST00000507292 GPCPD1Q9NPB8 672 aa6.53□□□□□ -1.36
SRPK1-208ENST00000507292 WNT7AO00755 349 aa6.52□□□□□ -1.37
SRPK1-208ENST00000507292 CLCN1P35523 988 aa6.52□□□□□ -1.37
SRPK1-208ENST00000507292 CRIPAKQ8N1N5 446 aa6.52□□□□□ -1.37
SRPK1-208ENST00000507292 MRGPRX2Q96LB1 330 aa6.52□□□□□ -1.37
SRPK1-208ENST00000507292 KRI1Q8N9T8 703 aaKnown RBP6.51□□□□□ -1.37
SRPK1-208ENST00000507292 FAM217BQ9NTX9 383 aaPredicted RBP6.51□□□□□ -1.37
SRPK1-208ENST00000507292 GMPR2Q9P2T1 348 aaKnown RBP6.51□□□□□ -1.37
SRPK1-208ENST00000507292 SMPD1P17405 629 aa6.5□□□□□ -1.37
SRPK1-208ENST00000507292 NUTM1Q86Y26 1132 aa6.5□□□□□ -1.37
SRPK1-208ENST00000507292 SNIP1Q8TAD8 396 aaKnown RBP6.5□□□□□ -1.37
SRPK1-208ENST00000507292 REPIN1Q9BWE0 567 aaKnown RBP6.5□□□□□ -1.37
SRPK1-208ENST00000507292 C11orf95C9JLR9 678 aaPredicted RBP6.49□□□□□ -1.37
SRPK1-208ENST00000507292 J3QL48 77 aa6.49□□□□□ -1.37
SRPK1-208ENST00000507292 CTC1Q2NKJ3 1217 aa6.49□□□□□ -1.37
SRPK1-208ENST00000507292 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.49□□□□□ -1.37
SRPK1-208ENST00000507292 JUNDP17535 347 aa6.48□□□□□ -1.37
SRPK1-208ENST00000507292 SKOR1P84550 965 aa6.48□□□□□ -1.37
SRPK1-208ENST00000507292 RC3H1Q5TC82 1133 aaKnown RBP6.48□□□□□ -1.37
SRPK1-208ENST00000507292 STK17AQ9UEE5 414 aa6.48□□□□□ -1.37
SRPK1-208ENST00000507292 SMCPP49901 116 aaPredicted RBP6.47□□□□□ -1.37
SRPK1-208ENST00000507292 TREML4Q6UXN2 200 aa6.47□□□□□ -1.37
SRPK1-208ENST00000507292 C6orf229H3BNL8 230 aa6.46□□□□□ -1.38
SRPK1-208ENST00000507292 FDX1P10109 184 aa6.46□□□□□ -1.38
SRPK1-208ENST00000507292 SSTR3P32745 418 aaPredicted RBP6.46□□□□□ -1.38
SRPK1-208ENST00000507292 PTCRAQ6ISU1 281 aaPredicted RBP6.46□□□□□ -1.38
SRPK1-208ENST00000507292 HPS1Q92902 700 aa6.46□□□□□ -1.38
SRPK1-208ENST00000507292 PCDHGC3Q9UN70 934 aa6.46□□□□□ -1.38
SRPK1-208ENST00000507292 NDUFV2P19404 249 aa6.45□□□□□ -1.38
SRPK1-208ENST00000507292 RETREG3Q86VR2 466 aa6.45□□□□□ -1.38
SRPK1-208ENST00000507292 NUDT12Q9BQG2 462 aa6.45□□□□□ -1.38
SRPK1-208ENST00000507292 WNT7BP56706 349 aa6.44□□□□□ -1.38
SRPK1-208ENST00000507292 TTLL12Q14166 644 aaPredicted RBP6.44□□□□□ -1.38
SRPK1-208ENST00000507292 SPIRE2Q8WWL2 714 aa6.44□□□□□ -1.38
SRPK1-208ENST00000507292 ATP13A2Q9NQ11 1180 aa6.44□□□□□ -1.38
SRPK1-208ENST00000507292 ALDH1A1P00352 501 aa6.43□□□□□ -1.38
SRPK1-208ENST00000507292 SNRPBP14678 240 aaKnown RBP6.43□□□□□ -1.38
SRPK1-208ENST00000507292 LCE2AQ5TA79 106 aaPredicted RBP6.43□□□□□ -1.38
SRPK1-208ENST00000507292 BARGINQ6ZT62 677 aa6.43□□□□□ -1.38
SRPK1-208ENST00000507292 MOXD2PA6NHM9 499 aa6.42□□□□□ -1.38
SRPK1-208ENST00000507292 ZMYND10O75800 440 aa6.41□□□□□ -1.38
SRPK1-208ENST00000507292 WFS1O76024 890 aa6.41□□□□□ -1.38
SRPK1-208ENST00000507292 MS4A1P11836 297 aa6.41□□□□□ -1.38
SRPK1-208ENST00000507292 EHBP1Q8NDI1 1231 aa6.41□□□□□ -1.38
SRPK1-208ENST00000507292 CCNYL3P0C7X3 344 aa6.4□□□□□ -1.38
SRPK1-208ENST00000507292 GIGYF2Q6Y7W6 1299 aaKnown RBP6.4□□□□□ -1.38
SRPK1-208ENST00000507292 ZC3H15Q8WU90 426 aaKnown RBP6.4□□□□□ -1.38
SRPK1-208ENST00000507292 SIAH2O43255 324 aa6.39□□□□□ -1.39
SRPK1-208ENST00000507292 SH3BP2P78314 561 aa6.39□□□□□ -1.39
SRPK1-208ENST00000507292 NFX1Q12986 1120 aaKnown RBP6.39□□□□□ -1.39
SRPK1-208ENST00000507292 AMHR2Q16671 573 aa6.39□□□□□ -1.39
SRPK1-208ENST00000507292 LINC01559Q495D7 138 aa6.39□□□□□ -1.39
SRPK1-208ENST00000507292 PRR7Q8TB68 274 aa6.39□□□□□ -1.39
SRPK1-208ENST00000507292 TRIM47Q96LD4 638 aa6.39□□□□□ -1.39
SRPK1-208ENST00000507292 BEGAINQ9BUH8 593 aa6.39□□□□□ -1.39
SRPK1-208ENST00000507292 SENP2Q9HC62 589 aa6.39□□□□□ -1.39
SRPK1-208ENST00000507292 SUZ12Q15022 739 aaKnown RBP6.38□□□□□ -1.39
SRPK1-208ENST00000507292 PTPRNQ16849 979 aa6.38□□□□□ -1.39
SRPK1-208ENST00000507292 UNC93B1Q9H1C4 597 aa6.38□□□□□ -1.39
SRPK1-208ENST00000507292 WASF2Q9Y6W5 498 aa6.38□□□□□ -1.39
SRPK1-208ENST00000507292 KCNH2Q12809 1159 aa6.37□□□□□ -1.39
SRPK1-208ENST00000507292 MTMR2Q13614 643 aa6.37□□□□□ -1.39
SRPK1-208ENST00000507292 BAP1Q92560 729 aa6.37□□□□□ -1.39
SRPK1-208ENST00000507292 TBC1D2Q9BYX2 928 aa6.37□□□□□ -1.39
SRPK1-208ENST00000507292 EVA1BQ9NVM1 165 aa6.37□□□□□ -1.39
SRPK1-208ENST00000507292 BMP1P13497 986 aa6.36□□□□□ -1.39
SRPK1-208ENST00000507292 PCDHB15Q9Y5E8 787 aa6.36□□□□□ -1.39
SRPK1-208ENST00000507292 TLL2Q9Y6L7 1015 aa6.36□□□□□ -1.39
SRPK1-208ENST00000507292 TERTO14746 1132 aaKnown RBP6.35□□□□□ -1.39
SRPK1-208ENST00000507292 CAPN5O15484 640 aaPredicted RBP6.35□□□□□ -1.39
SRPK1-208ENST00000507292 CTHP32929 405 aa6.35□□□□□ -1.39
SRPK1-208ENST00000507292 LCE2CQ5TA81 110 aa6.35□□□□□ -1.39
SRPK1-208ENST00000507292 PARP9Q8IXQ6 854 aa6.35□□□□□ -1.39
SRPK1-208ENST00000507292 KIFC2Q96AC6 838 aa6.35□□□□□ -1.39
SRPK1-208ENST00000507292 SPDYE5A6NIY4 337 aa6.34□□□□□ -1.39
SRPK1-208ENST00000507292 TRIM66O15016 1216 aa6.34□□□□□ -1.39
SRPK1-208ENST00000507292 RSBN1LQ6PCB5 846 aaPredicted RBP6.34□□□□□ -1.39
SRPK1-208ENST00000507292 TRIM46Q7Z4K8 759 aa6.34□□□□□ -1.39
SRPK1-208ENST00000507292 ZNF511Q8NB15 262 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms