RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 DHX37Q8IY37 1157 aaKnown RBP6.31□□□□□ -1.4
MATR3-211ENST00000505625 CCDC85AQ96PX6 553 aaPredicted RBP6.31□□□□□ -1.4
MATR3-211ENST00000505625 ANO2Q9NQ90 1003 aa6.31□□□□□ -1.4
MATR3-211ENST00000505625 RBM19Q9Y4C8 960 aaKnown RBP6.31□□□□□ -1.4
MATR3-211ENST00000505625 EFCAB2Q5VUJ9 269 aa6.31□□□□□ -1.4
MATR3-211ENST00000505625 TTC39AQ5SRH9 613 aa6.31□□□□□ -1.4
MATR3-211ENST00000505625 CPLX3Q8WVH0 158 aa6.31□□□□□ -1.4
MATR3-211ENST00000505625 LMOD1P29536 600 aaPredicted RBP6.31□□□□□ -1.4
MATR3-211ENST00000505625 NBPF8Q3BBV2 869 aa6.31□□□□□ -1.4
MATR3-211ENST00000505625 NBPF14Q5TI25 921 aa6.31□□□□□ -1.4
MATR3-211ENST00000505625 TTLL5Q6EMB2 1281 aa6.31□□□□□ -1.4
MATR3-211ENST00000505625 DDX58O95786 925 aaKnown RBP6.31□□□□□ -1.4
MATR3-211ENST00000505625 IFIT2P09913 472 aaKnown RBP6.31□□□□□ -1.4
MATR3-211ENST00000505625 MSNP26038 577 aaKnown RBP6.31□□□□□ -1.4
MATR3-211ENST00000505625 CRACR2BQ8N4Y2 399 aaPredicted RBP6.31□□□□□ -1.4
MATR3-211ENST00000505625 MFAP1P55081 439 aaKnown RBP6.3□□□□□ -1.4
MATR3-211ENST00000505625 SEPT11Q9NVA2 429 aaKnown RBP6.3□□□□□ -1.4
MATR3-211ENST00000505625 CLUAP1Q96AJ1 413 aa6.3□□□□□ -1.4
MATR3-211ENST00000505625 HINFPQ9BQA5 517 aa6.3□□□□□ -1.4
MATR3-211ENST00000505625 COMMD10Q9Y6G5 202 aa6.3□□□□□ -1.4
MATR3-211ENST00000505625 CPLX1O14810 134 aa6.3□□□□□ -1.4
MATR3-211ENST00000505625 SSR1P43307 286 aaKnown RBP6.3□□□□□ -1.4
MATR3-211ENST00000505625 HMGN5P82970 282 aaKnown RBP6.3□□□□□ -1.4
MATR3-211ENST00000505625 SLC3A2P08195 630 aaKnown RBP6.3□□□□□ -1.4
MATR3-211ENST00000505625 SKIV2LQ15477 1246 aaKnown RBP6.3□□□□□ -1.4
MATR3-211ENST00000505625 LRRFIP1Q32MZ4 808 aaKnown RBP6.3□□□□□ -1.4
MATR3-211ENST00000505625 ABCC8Q09428 1581 aa6.3□□□□□ -1.4
MATR3-211ENST00000505625 GPRASP1Q5JY77 1395 aa6.3□□□□□ -1.4
MATR3-211ENST00000505625 NEFHP12036 1026 aa6.29□□□□□ -1.4
MATR3-211ENST00000505625 DNAJC2Q99543 621 aaKnown RBP6.29□□□□□ -1.4
MATR3-211ENST00000505625 TTC30AQ86WT1 665 aa6.29□□□□□ -1.4
MATR3-211ENST00000505625 HDAC5Q9UQL6 1122 aa6.29□□□□□ -1.4
MATR3-211ENST00000505625 TPM1P09493 284 aa6.29□□□□□ -1.4
MATR3-211ENST00000505625 TXNDC2Q86VQ3 553 aa6.29□□□□□ -1.4
MATR3-211ENST00000505625 ATP2B1P20020 1258 aa6.29□□□□□ -1.4
MATR3-211ENST00000505625 RGS22Q8NE09 1264 aa6.29□□□□□ -1.4
MATR3-211ENST00000505625 ACSBG1Q96GR2 724 aa6.29□□□□□ -1.4
MATR3-211ENST00000505625 HMMRO75330 724 aa6.29□□□□□ -1.4
MATR3-211ENST00000505625 HMOX1P09601 288 aa6.29□□□□□ -1.4
MATR3-211ENST00000505625 TAF12Q16514 161 aa6.29□□□□□ -1.4
MATR3-211ENST00000505625 G3BP1Q13283 466 aaKnown RBP eCLIP6.28□□□□□ -1.4
MATR3-211ENST00000505625 BRMS1Q9HCU9 246 aa6.28□□□□□ -1.4
MATR3-211ENST00000505625 SUPT16HQ9Y5B9 1047 aaKnown RBP6.28□□□□□ -1.4
MATR3-211ENST00000505625 ATP2B3Q16720 1220 aa6.28□□□□□ -1.4
MATR3-211ENST00000505625 PKD2Q13563 968 aa6.28□□□□□ -1.4
MATR3-211ENST00000505625 ERC1Q8IUD2 1116 aa6.28□□□□□ -1.4
MATR3-211ENST00000505625 MPHOSPH8Q99549 860 aa6.28□□□□□ -1.4
MATR3-211ENST00000505625 CHMP4AQ9BY43 222 aa6.28□□□□□ -1.4
MATR3-211ENST00000505625 GRIPAP1Q4V328 841 aa6.27□□□□□ -1.4
MATR3-211ENST00000505625 DIAPH3Q9NSV4 1193 aa6.27□□□□□ -1.4
MATR3-211ENST00000505625 RAD54L2Q9Y4B4 1467 aa6.27□□□□□ -1.41
MATR3-211ENST00000505625 OFD1O75665 1012 aa6.27□□□□□ -1.41
MATR3-211ENST00000505625 PPP4R3AQ6IN85 833 aa6.27□□□□□ -1.41
MATR3-211ENST00000505625 PRDM11Q9NQV5 511 aa6.27□□□□□ -1.41
MATR3-211ENST00000505625 FEZ1Q99689 392 aa6.27□□□□□ -1.41
MATR3-211ENST00000505625 GNL3LQ9NVN8 582 aaKnown RBP6.27□□□□□ -1.41
MATR3-211ENST00000505625 STK24Q9Y6E0 443 aa6.27□□□□□ -1.41
MATR3-211ENST00000505625 WRNQ14191 1432 aaPredicted RBP eCLIP6.27□□□□□ -1.41
MATR3-211ENST00000505625 NLRP6P59044 892 aa6.27□□□□□ -1.41
MATR3-211ENST00000505625 ZC3H6P61129 1189 aaKnown RBP6.27□□□□□ -1.41
MATR3-211ENST00000505625 IPO9Q96P70 1041 aaKnown RBP6.27□□□□□ -1.41
MATR3-211ENST00000505625 PUS7Q96PZ0 661 aaKnown RBP6.27□□□□□ -1.41
MATR3-211ENST00000505625 RFC4P35249 363 aa6.27□□□□□ -1.41
MATR3-211ENST00000505625 MPRIPQ6WCQ1 1025 aa6.27□□□□□ -1.41
MATR3-211ENST00000505625 CDCA7Q9BWT1 371 aaPredicted RBP6.27□□□□□ -1.41
MATR3-211ENST00000505625 TSPYL4Q9UJ04 414 aa6.27□□□□□ -1.41
MATR3-211ENST00000505625 TATP17735 454 aaPredicted RBP6.26□□□□□ -1.41
MATR3-211ENST00000505625 EIF3AQ14152 1382 aaKnown RBP6.26□□□□□ -1.41
MATR3-211ENST00000505625 SMG6Q86US8 1419 aaKnown RBP6.26□□□□□ -1.41
MATR3-211ENST00000505625 NOP9Q86U38 636 aaKnown RBP6.26□□□□□ -1.41
MATR3-211ENST00000505625 HDAC9Q9UKV0 1011 aa6.26□□□□□ -1.41
MATR3-211ENST00000505625 PRKG1Q13976 671 aa6.26□□□□□ -1.41
MATR3-211ENST00000505625 TBC1D2BQ9UPU7 963 aa6.26□□□□□ -1.41
MATR3-211ENST00000505625 TDRD9Q8NDG6 1382 aaKnown RBP6.26□□□□□ -1.41
MATR3-211ENST00000505625 C6orf229H3BNL8 230 aa6.26□□□□□ -1.41
MATR3-211ENST00000505625 MYO1BO43795 1136 aa6.26□□□□□ -1.41
MATR3-211ENST00000505625 F8W031 263 aaPredicted RBP6.26□□□□□ -1.41
MATR3-211ENST00000505625 SSBP05455 408 aaKnown RBP eCLIP6.26□□□□□ -1.41
MATR3-211ENST00000505625 ZBTB33Q86T24 672 aa6.26□□□□□ -1.41
MATR3-211ENST00000505625 NF2P35240 595 aa6.25□□□□□ -1.41
MATR3-211ENST00000505625 CCDC70Q6NSX1 233 aa6.25□□□□□ -1.41
MATR3-211ENST00000505625 LPXNO60711 386 aa6.25□□□□□ -1.41
MATR3-211ENST00000505625 LMOD3Q0VAK6 560 aa6.25□□□□□ -1.41
MATR3-211ENST00000505625 PROCA1Q8NCQ7 364 aaPredicted RBP6.25□□□□□ -1.41
MATR3-211ENST00000505625 SIN3AQ96ST3 1273 aa6.25□□□□□ -1.41
MATR3-211ENST00000505625 BRPF1P55201 1214 aaPredicted RBP6.25□□□□□ -1.41
MATR3-211ENST00000505625 GTF3C6Q969F1 213 aa6.25□□□□□ -1.41
MATR3-211ENST00000505625 CPLX2Q6PUV4 134 aaKnown RBP6.25□□□□□ -1.41
MATR3-211ENST00000505625 FKBP5Q13451 457 aaPredicted RBP6.25□□□□□ -1.41
MATR3-211ENST00000505625 RALYLQ86SE5 291 aaKnown RBP6.25□□□□□ -1.41
MATR3-211ENST00000505625 NUP133Q8WUM0 1156 aa6.25□□□□□ -1.41
MATR3-211ENST00000505625 DESP17661 470 aa6.24□□□□□ -1.41
MATR3-211ENST00000505625 SIL1Q9H173 461 aa6.24□□□□□ -1.41
MATR3-211ENST00000505625 ANKRD20A12PQ8NF67 263 aa6.24□□□□□ -1.41
MATR3-211ENST00000505625 ZNF592Q92610 1267 aa6.24□□□□□ -1.41
MATR3-211ENST00000505625 POLR3DP05423 398 aaPredicted RBP6.24□□□□□ -1.41
MATR3-211ENST00000505625 RDXP35241 583 aaKnown RBP6.24□□□□□ -1.41
MATR3-211ENST00000505625 PABPN1LA6NDY0 278 aaKnown RBP6.24□□□□□ -1.41
MATR3-211ENST00000505625 ANAPC15P60006 121 aa6.24□□□□□ -1.41
MATR3-211ENST00000505625 SAFBQ15424 915 aaKnown RBP eCLIP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms