RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 GTF3C3Q9Y5Q9 886 aa7.78□□□□□ -1.16
TRAPPC13-208ENST00000505553 P3H3Q8IVL6 736 aa7.77□□□□□ -1.17
TRAPPC13-208ENST00000505553 REPIN1Q9BWE0 567 aaKnown RBP7.77□□□□□ -1.17
TRAPPC13-208ENST00000505553 OATP04181 439 aa7.76□□□□□ -1.17
TRAPPC13-208ENST00000505553 MORN1Q5T089 497 aa7.76□□□□□ -1.17
TRAPPC13-208ENST00000505553 THAP11Q96EK4 314 aa7.76□□□□□ -1.17
TRAPPC13-208ENST00000505553 J3QL48 77 aa7.75□□□□□ -1.17
TRAPPC13-208ENST00000505553 TULP1O00294 542 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC13-208ENST00000505553 FAM161AQ3B820 660 aa7.75□□□□□ -1.17
TRAPPC13-208ENST00000505553 FAM160A2Q8N612 972 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC13-208ENST00000505553 MRGPRX2Q96LB1 330 aa7.75□□□□□ -1.17
TRAPPC13-208ENST00000505553 SALL2Q9Y467 1007 aaPredicted RBP7.75□□□□□ -1.17
TRAPPC13-208ENST00000505553 LORP23490 312 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC13-208ENST00000505553 ATP6V1AP38606 617 aa7.74□□□□□ -1.17
TRAPPC13-208ENST00000505553 TRIM32Q13049 653 aa7.74□□□□□ -1.17
TRAPPC13-208ENST00000505553 TIMELESSQ9UNS1 1208 aa7.74□□□□□ -1.17
TRAPPC13-208ENST00000505553 TMEM132AQ24JP5 1023 aa7.73□□□□□ -1.17
TRAPPC13-208ENST00000505553 KCNV2Q8TDN2 545 aa7.73□□□□□ -1.17
TRAPPC13-208ENST00000505553 HPS1Q92902 700 aa7.73□□□□□ -1.17
TRAPPC13-208ENST00000505553 NUTM2FA1L443 756 aa7.72□□□□□ -1.17
TRAPPC13-208ENST00000505553 MSS51Q4VC12 460 aa7.72□□□□□ -1.17
TRAPPC13-208ENST00000505553 PXYLP1Q8TE99 480 aa7.72□□□□□ -1.17
TRAPPC13-208ENST00000505553 RDH13Q8NBN7 331 aa7.71□□□□□ -1.17
TRAPPC13-208ENST00000505553 FCHSD2O94868 740 aa7.7□□□□□ -1.18
TRAPPC13-208ENST00000505553 MLLT3P42568 568 aaPredicted RBP7.7□□□□□ -1.18
TRAPPC13-208ENST00000505553 FUT2Q10981 343 aa7.7□□□□□ -1.18
TRAPPC13-208ENST00000505553 PRDM9Q9NQV7 894 aa7.7□□□□□ -1.18
TRAPPC13-208ENST00000505553 SLC27A5Q9Y2P5 690 aa7.7□□□□□ -1.18
TRAPPC13-208ENST00000505553 BRICD5Q6PL45 260 aa7.69□□□□□ -1.18
TRAPPC13-208ENST00000505553 H3BM21 787 aa7.69□□□□□ -1.18
TRAPPC13-208ENST00000505553 FECHP22830 423 aa7.69□□□□□ -1.18
TRAPPC13-208ENST00000505553 GRIPAP1Q4V328 841 aa7.67□□□□□ -1.18
TRAPPC13-208ENST00000505553 DAXXQ9UER7 740 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC13-208ENST00000505553 METTL3Q86U44 580 aaKnown RBP7.66□□□□□ -1.18
TRAPPC13-208ENST00000505553 WNT7BP56706 349 aa7.65□□□□□ -1.18
TRAPPC13-208ENST00000505553 KCNMA1Q12791 1236 aa7.65□□□□□ -1.18
TRAPPC13-208ENST00000505553 RC3H1Q5TC82 1133 aaKnown RBP7.65□□□□□ -1.18
TRAPPC13-208ENST00000505553 DDX11L8A8MPP1 907 aa7.64□□□□□ -1.19
TRAPPC13-208ENST00000505553 VEGFBP49765 207 aa7.64□□□□□ -1.19
TRAPPC13-208ENST00000505553 MMP16P51512 607 aa7.64□□□□□ -1.19
TRAPPC13-208ENST00000505553 Q3C1V9 767 aa7.64□□□□□ -1.19
TRAPPC13-208ENST00000505553 ALDH1A1P00352 501 aa7.63□□□□□ -1.19
TRAPPC13-208ENST00000505553 GCGRP47871 477 aa7.63□□□□□ -1.19
TRAPPC13-208ENST00000505553 SULF1Q8IWU6 871 aa7.63□□□□□ -1.19
TRAPPC13-208ENST00000505553 ARXQ96QS3 562 aa7.63□□□□□ -1.19
TRAPPC13-208ENST00000505553 ERBB4Q15303 1308 aa7.63□□□□□ -1.19
TRAPPC13-208ENST00000505553 SEMA3EO15041 775 aa7.62□□□□□ -1.19
TRAPPC13-208ENST00000505553 CAPN5O15484 640 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC13-208ENST00000505553 RNF19BQ6ZMZ0 732 aa7.62□□□□□ -1.19
TRAPPC13-208ENST00000505553 KCTD17Q8N5Z5 321 aa7.62□□□□□ -1.19
TRAPPC13-208ENST00000505553 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.61□□□□□ -1.19
TRAPPC13-208ENST00000505553 BMP1P13497 986 aa7.61□□□□□ -1.19
TRAPPC13-208ENST00000505553 HIC1Q14526 733 aa7.61□□□□□ -1.19
TRAPPC13-208ENST00000505553 SMYD5Q6GMV2 418 aa7.61□□□□□ -1.19
TRAPPC13-208ENST00000505553 TRIM46Q7Z4K8 759 aa7.61□□□□□ -1.19
TRAPPC13-208ENST00000505553 WASF2Q9Y6W5 498 aa7.6□□□□□ -1.19
TRAPPC13-208ENST00000505553 TMEM151AQ8N4L1 468 aa7.59□□□□□ -1.19
TRAPPC13-208ENST00000505553 CCDC24Q8N4L8 307 aa7.59□□□□□ -1.19
TRAPPC13-208ENST00000505553 DXOO77932 396 aaKnown RBP7.58□□□□□ -1.2
TRAPPC13-208ENST00000505553 SKOR1P84550 965 aa7.58□□□□□ -1.2
TRAPPC13-208ENST00000505553 C14orf37Q86TY3 774 aa7.57□□□□□ -1.2
TRAPPC13-208ENST00000505553 USB1Q9BQ65 265 aaKnown RBP7.57□□□□□ -1.2
TRAPPC13-208ENST00000505553 RNF225M0QZC1 329 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC13-208ENST00000505553 VSIG8P0DPA2 414 aa7.55□□□□□ -1.2
TRAPPC13-208ENST00000505553 ZFP42Q96MM3 310 aa7.55□□□□□ -1.2
TRAPPC13-208ENST00000505553 TESPA1A2RU30 521 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC13-208ENST00000505553 GDF11O95390 407 aa7.54□□□□□ -1.2
TRAPPC13-208ENST00000505553 EHBP1Q8NDI1 1231 aa7.54□□□□□ -1.2
TRAPPC13-208ENST00000505553 SCARF1Q14162 830 aa7.53□□□□□ -1.2
TRAPPC13-208ENST00000505553 SIAH2O43255 324 aa7.52□□□□□ -1.2
TRAPPC13-208ENST00000505553 GSK3AP49840 483 aa7.52□□□□□ -1.2
TRAPPC13-208ENST00000505553 RASSF7Q02833 373 aa7.52□□□□□ -1.2
TRAPPC13-208ENST00000505553 RBM26Q5T8P6 1007 aaKnown RBP7.52□□□□□ -1.2
TRAPPC13-208ENST00000505553 GNPATO15228 680 aa7.51□□□□□ -1.21
TRAPPC13-208ENST00000505553 BRPF1P55201 1214 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC13-208ENST00000505553 MRPL14Q6P1L8 145 aaKnown RBP7.49□□□□□ -1.21
TRAPPC13-208ENST00000505553 HOMEZQ8IX15 550 aa7.48□□□□□ -1.21
TRAPPC13-208ENST00000505553 ZC3H15Q8WU90 426 aaKnown RBP7.48□□□□□ -1.21
TRAPPC13-208ENST00000505553 PLEKHG3A1L390 1219 aa7.47□□□□□ -1.21
TRAPPC13-208ENST00000505553 IGHA1P01876 353 aa7.47□□□□□ -1.21
TRAPPC13-208ENST00000505553 NLRP7Q8WX94 980 aa7.47□□□□□ -1.21
TRAPPC13-208ENST00000505553 JUNDP17535 347 aa7.46□□□□□ -1.21
TRAPPC13-208ENST00000505553 USP46P62068 366 aa7.46□□□□□ -1.21
TRAPPC13-208ENST00000505553 KDM4AO75164 1064 aa7.45□□□□□ -1.22
TRAPPC13-208ENST00000505553 NEUROD2Q15784 382 aa7.45□□□□□ -1.22
TRAPPC13-208ENST00000505553 PURBQ96QR8 312 aaKnown RBP7.45□□□□□ -1.22
TRAPPC13-208ENST00000505553 GPIHBP1Q8IV16 184 aa7.44□□□□□ -1.22
TRAPPC13-208ENST00000505553 NUDT12Q9BQG2 462 aa7.44□□□□□ -1.22
TRAPPC13-208ENST00000505553 ADAMTS8Q9UP79 889 aa7.44□□□□□ -1.22
TRAPPC13-208ENST00000505553 MAN1A2O60476 641 aa7.43□□□□□ -1.22
TRAPPC13-208ENST00000505553 CD46P15529 392 aa7.43□□□□□ -1.22
TRAPPC13-208ENST00000505553 DNMT3AQ9Y6K1 912 aaPredicted RBP7.43□□□□□ -1.22
TRAPPC13-208ENST00000505553 SOBPA7XYQ1 873 aa7.42□□□□□ -1.22
TRAPPC13-208ENST00000505553 ADH1CP00326 375 aa7.42□□□□□ -1.22
TRAPPC13-208ENST00000505553 SH3BP2P78314 561 aa7.42□□□□□ -1.22
TRAPPC13-208ENST00000505553 FOXK2Q01167 660 aa7.42□□□□□ -1.22
TRAPPC13-208ENST00000505553 NNTQ13423 1086 aa7.42□□□□□ -1.22
TRAPPC13-208ENST00000505553 GPAT2Q6NUI2 795 aa7.42□□□□□ -1.22
TRAPPC13-208ENST00000505553 SLC24A3Q9HC58 644 aa7.42□□□□□ -1.22
TRAPPC13-208ENST00000505553 GPR37O15354 613 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms