RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 PRAM1Q96QH2 718 aa8.54□□□□□ -1.04
SPOP-208ENST00000504889 SIN3AQ96ST3 1273 aa8.54□□□□□ -1.04
SPOP-208ENST00000504889 CDC42BPGQ6DT37 1551 aa8.53□□□□□ -1.04
SPOP-208ENST00000504889 JCADQ9P266 1359 aa8.53□□□□□ -1.04
SPOP-208ENST00000504889 PLEKHH1Q9ULM0 1364 aa8.53□□□□□ -1.04
SPOP-208ENST00000504889 NUTM2BA6NNL0 878 aaPredicted RBP8.53□□□□□ -1.04
SPOP-208ENST00000504889 NUTM2EB1AL46 878 aaPredicted RBP8.53□□□□□ -1.04
SPOP-208ENST00000504889 NUTM2AQ8IVF1 878 aaPredicted RBP8.53□□□□□ -1.04
SPOP-208ENST00000504889 TECPR2O15040 1411 aa8.53□□□□□ -1.04
SPOP-208ENST00000504889 C1orf167Q5SNV9 1468 aa8.52□□□□□ -1.05
SPOP-208ENST00000504889 TONSLQ96HA7 1378 aa8.52□□□□□ -1.05
SPOP-208ENST00000504889 COL16A1Q07092 1604 aaPredicted RBP8.52□□□□□ -1.05
SPOP-208ENST00000504889 AHDC1Q5TGY3 1603 aaPredicted RBP8.52□□□□□ -1.05
SPOP-208ENST00000504889 DDX17Q92841 729 aaKnown RBP8.52□□□□□ -1.05
SPOP-208ENST00000504889 ORAI2Q96SN7 254 aa8.52□□□□□ -1.05
SPOP-208ENST00000504889 HIRIP3Q9BW71 556 aaPredicted RBP8.52□□□□□ -1.05
SPOP-208ENST00000504889 PRAG1Q86YV5 1406 aa8.52□□□□□ -1.05
SPOP-208ENST00000504889 MINK1Q8N4C8 1332 aaPredicted RBP8.52□□□□□ -1.05
SPOP-208ENST00000504889 LRRC59Q96AG4 307 aaKnown RBP8.51□□□□□ -1.05
SPOP-208ENST00000504889 PCGF6Q9BYE7 350 aa8.51□□□□□ -1.05
SPOP-208ENST00000504889 NHSL1Q5SYE7 1610 aa8.51□□□□□ -1.05
SPOP-208ENST00000504889 PLEKHG5O94827 1062 aa8.5□□□□□ -1.05
SPOP-208ENST00000504889 L3MBTL2Q969R5 705 aa8.5□□□□□ -1.05
SPOP-208ENST00000504889 SPATA31A6Q5VVP1 1343 aa8.5□□□□□ -1.05
SPOP-208ENST00000504889 NPHP3Q7Z494 1330 aa8.5□□□□□ -1.05
SPOP-208ENST00000504889 DLC1Q96QB1 1528 aa8.49□□□□□ -1.05
SPOP-208ENST00000504889 ADGRB1O14514 1584 aa8.49□□□□□ -1.05
SPOP-208ENST00000504889 FOXO3O43524 673 aa8.49□□□□□ -1.05
SPOP-208ENST00000504889 HAP1P54257 671 aaPredicted RBP8.49□□□□□ -1.05
SPOP-208ENST00000504889 XPCQ01831 940 aaPredicted RBP8.49□□□□□ -1.05
SPOP-208ENST00000504889 LMOD2Q6P5Q4 547 aa8.49□□□□□ -1.05
SPOP-208ENST00000504889 SIRT1Q96EB6 747 aa8.49□□□□□ -1.05
SPOP-208ENST00000504889 FMN2Q9NZ56 1722 aa8.49□□□□□ -1.05
SPOP-208ENST00000504889 EIF3AQ14152 1382 aaKnown RBP8.48□□□□□ -1.05
SPOP-208ENST00000504889 SHPRHQ149N8 1683 aa8.48□□□□□ -1.05
SPOP-208ENST00000504889 KIAA1210Q9ULL0 1709 aa8.48□□□□□ -1.05
SPOP-208ENST00000504889 ROCK2O75116 1388 aaKnown RBP8.48□□□□□ -1.05
SPOP-208ENST00000504889 KIF1AQ12756 1690 aa8.47□□□□□ -1.05
SPOP-208ENST00000504889 ARHGEF28Q8N1W1 1705 aaKnown RBP8.47□□□□□ -1.05
SPOP-208ENST00000504889 PSME1Q06323 249 aa8.47□□□□□ -1.05
SPOP-208ENST00000504889 NBPF1Q3BBV0 1214 aa8.47□□□□□ -1.05
SPOP-208ENST00000504889 ILDR2Q71H61 639 aa8.47□□□□□ -1.05
SPOP-208ENST00000504889 PMFBP1Q8TBY8 1022 aa8.47□□□□□ -1.05
SPOP-208ENST00000504889 PHF8Q9UPP1 1060 aa8.47□□□□□ -1.05
SPOP-208ENST00000504889 ADAMTS2O95450 1211 aa8.46□□□□□ -1.06
SPOP-208ENST00000504889 SRPK2P78362 688 aaKnown RBP8.46□□□□□ -1.06
SPOP-208ENST00000504889 C8orf37Q96NL8 207 aa8.46□□□□□ -1.06
SPOP-208ENST00000504889 ADGRB2O60241 1585 aa8.45□□□□□ -1.06
SPOP-208ENST00000504889 TRPM1Q7Z4N2 1603 aa8.45□□□□□ -1.06
SPOP-208ENST00000504889 WASLO00401 505 aaPredicted RBP8.45□□□□□ -1.06
SPOP-208ENST00000504889 PAK3O75914 559 aaPredicted RBP8.45□□□□□ -1.06
SPOP-208ENST00000504889 KRT28Q7Z3Y7 464 aa8.45□□□□□ -1.06
SPOP-208ENST00000504889 NGDNQ8NEJ9 315 aaKnown RBP8.45□□□□□ -1.06
SPOP-208ENST00000504889 CENPJQ9HC77 1338 aaPredicted RBP8.45□□□□□ -1.06
SPOP-208ENST00000504889 PNPLA6Q8IY17 1366 aa8.45□□□□□ -1.06
SPOP-208ENST00000504889 TULP4Q9NRJ4 1543 aa8.44□□□□□ -1.06
SPOP-208ENST00000504889 LRP6O75581 1613 aa8.44□□□□□ -1.06
SPOP-208ENST00000504889 RGPD8O14715 1765 aaPredicted RBP8.44□□□□□ -1.06
SPOP-208ENST00000504889 CCER1Q8TC90 406 aaPredicted RBP8.44□□□□□ -1.06
SPOP-208ENST00000504889 SOS2Q07890 1332 aaPredicted RBP8.44□□□□□ -1.06
SPOP-208ENST00000504889 GPRASP1Q5JY77 1395 aa8.44□□□□□ -1.06
SPOP-208ENST00000504889 ANKARQ7Z5J8 1434 aa8.44□□□□□ -1.06
SPOP-208ENST00000504889 QRICH2Q9H0J4 1663 aa8.43□□□□□ -1.06
SPOP-208ENST00000504889 ITSN1Q15811 1721 aa8.43□□□□□ -1.06
SPOP-208ENST00000504889 ZNF772Q68DY9 489 aaPredicted RBP8.43□□□□□ -1.06
SPOP-208ENST00000504889 NGLY1Q96IV0 654 aa8.43□□□□□ -1.06
SPOP-208ENST00000504889 CDK19Q9BWU1 502 aa8.43□□□□□ -1.06
SPOP-208ENST00000504889 CARD11Q9BXL7 1154 aa8.43□□□□□ -1.06
SPOP-208ENST00000504889 PXDNQ92626 1479 aa8.43□□□□□ -1.06
SPOP-208ENST00000504889 NUDT16Q96DE0 195 aaKnown RBP8.42□□□□□ -1.06
SPOP-208ENST00000504889 AFF2P51816 1311 aa8.42□□□□□ -1.06
SPOP-208ENST00000504889 USP32Q8NFA0 1604 aa8.41□□□□□ -1.06
SPOP-208ENST00000504889 TNS3Q68CZ2 1445 aa8.41□□□□□ -1.06
SPOP-208ENST00000504889 CABP2Q9NPB3 220 aa8.41□□□□□ -1.06
SPOP-208ENST00000504889 ARHGEF10O15013 1369 aa8.4□□□□□ -1.06
SPOP-208ENST00000504889 SPATA31A3Q5VYP0 1347 aa8.4□□□□□ -1.06
SPOP-208ENST00000504889 EVC2Q86UK5 1308 aa8.4□□□□□ -1.06
SPOP-208ENST00000504889 PRR36Q9H6K5 1346 aa8.4□□□□□ -1.06
SPOP-208ENST00000504889 SOCS7O14512 581 aa8.4□□□□□ -1.06
SPOP-208ENST00000504889 NBPF8Q3BBV2 869 aa8.4□□□□□ -1.06
SPOP-208ENST00000504889 POTEAQ6S8J7 498 aa8.4□□□□□ -1.06
SPOP-208ENST00000504889 RGS17Q9UGC6 210 aaPredicted RBP8.4□□□□□ -1.06
SPOP-208ENST00000504889 COL22A1Q8NFW1 1626 aaPredicted RBP8.4□□□□□ -1.07
SPOP-208ENST00000504889 ATP7BP35670 1465 aa8.39□□□□□ -1.07
SPOP-208ENST00000504889 PPIP5K1Q6PFW1 1433 aa8.39□□□□□ -1.07
SPOP-208ENST00000504889 RXRBP28702 533 aa8.39□□□□□ -1.07
SPOP-208ENST00000504889 CABLES1Q8TDN4 633 aa8.39□□□□□ -1.07
SPOP-208ENST00000504889 USP21Q9UK80 565 aa8.39□□□□□ -1.07
SPOP-208ENST00000504889 CCDC61Q9Y6R9 512 aa8.39□□□□□ -1.07
SPOP-208ENST00000504889 RALGAPBQ86X10 1494 aa8.38□□□□□ -1.07
SPOP-208ENST00000504889 CCDC9Q9Y3X0 531 aaKnown RBP8.38□□□□□ -1.07
SPOP-208ENST00000504889 SBNO1A3KN83 1393 aa8.37□□□□□ -1.07
SPOP-208ENST00000504889 ACEP12821 1306 aa8.37□□□□□ -1.07
SPOP-208ENST00000504889 NUTM2GQ5VZR2 741 aa8.37□□□□□ -1.07
SPOP-208ENST00000504889 QTRT2Q9H974 415 aaKnown RBP8.37□□□□□ -1.07
SPOP-208ENST00000504889 TOPAZ1Q8N9V7 1692 aa8.37□□□□□ -1.07
SPOP-208ENST00000504889 CLSPNQ9HAW4 1339 aa8.36□□□□□ -1.07
SPOP-208ENST00000504889 A0A0G2JS52 829 aa8.36□□□□□ -1.07
SPOP-208ENST00000504889 ZBTB7CA1YPR0 619 aa8.36□□□□□ -1.07
SPOP-208ENST00000504889 MYT1Q01538 1121 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms