RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 CUL7Q14999 1698 aa7.3□□□□□ -1.24
LINC02397-201ENST00000504409 UQCRHLA0A096LP55 91 aa7.29□□□□□ -1.24
LINC02397-201ENST00000504409 PPFIA3O75145 1194 aa7.29□□□□□ -1.24
LINC02397-201ENST00000504409 UQCRHP07919 91 aa7.29□□□□□ -1.24
LINC02397-201ENST00000504409 KRT222Q8N1A0 295 aa7.29□□□□□ -1.24
LINC02397-201ENST00000504409 KANK1Q14678 1352 aa7.29□□□□□ -1.24
LINC02397-201ENST00000504409 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.29□□□□□ -1.24
LINC02397-201ENST00000504409 CFAP65Q6ZU64 1925 aaKnown RBP7.29□□□□□ -1.24
LINC02397-201ENST00000504409 SHTN1A0MZ66 631 aa7.29□□□□□ -1.24
LINC02397-201ENST00000504409 CBFA2T2O43439 604 aa7.29□□□□□ -1.24
LINC02397-201ENST00000504409 TRAK2O60296 914 aa7.29□□□□□ -1.24
LINC02397-201ENST00000504409 DYDC1Q8WWB3 177 aa7.29□□□□□ -1.24
LINC02397-201ENST00000504409 SYCP1Q15431 976 aa7.29□□□□□ -1.24
LINC02397-201ENST00000504409 RNF214Q8ND24 703 aa7.29□□□□□ -1.24
LINC02397-201ENST00000504409 FRAT1Q92837 279 aaPredicted RBP7.29□□□□□ -1.24
LINC02397-201ENST00000504409 IPO4Q8TEX9 1081 aaKnown RBP7.29□□□□□ -1.24
LINC02397-201ENST00000504409 GSDMDP57764 484 aa7.29□□□□□ -1.24
LINC02397-201ENST00000504409 REREQ9P2R6 1566 aa7.28□□□□□ -1.24
LINC02397-201ENST00000504409 TSPY26PQ9H489 355 aa7.28□□□□□ -1.24
LINC02397-201ENST00000504409 EFCC1Q9HA90 598 aa7.28□□□□□ -1.24
LINC02397-201ENST00000504409 CPSF2Q9P2I0 782 aaKnown RBP7.28□□□□□ -1.24
LINC02397-201ENST00000504409 RBM26Q5T8P6 1007 aaKnown RBP7.28□□□□□ -1.24
LINC02397-201ENST00000504409 CCDC171Q6TFL3 1326 aa7.28□□□□□ -1.24
LINC02397-201ENST00000504409 TIAM1Q13009 1591 aa7.28□□□□□ -1.24
LINC02397-201ENST00000504409 IRX6P78412 446 aaPredicted RBP7.28□□□□□ -1.24
LINC02397-201ENST00000504409 SLC4A1APQ9BWU0 796 aaKnown RBP7.28□□□□□ -1.24
LINC02397-201ENST00000504409 CARD11Q9BXL7 1154 aa7.28□□□□□ -1.24
LINC02397-201ENST00000504409 HECW1Q76N89 1606 aa7.28□□□□□ -1.24
LINC02397-201ENST00000504409 CFAP43Q8NDM7 1665 aa7.28□□□□□ -1.24
LINC02397-201ENST00000504409 BECN2A8MW95 431 aa7.28□□□□□ -1.24
LINC02397-201ENST00000504409 FMNL3Q8IVF7 1028 aa7.28□□□□□ -1.24
LINC02397-201ENST00000504409 SPC24Q8NBT2 197 aa7.28□□□□□ -1.24
LINC02397-201ENST00000504409 CCDC192P0DO97 292 aa7.28□□□□□ -1.24
LINC02397-201ENST00000504409 A0A1B0GUA9 196 aa7.27□□□□□ -1.24
LINC02397-201ENST00000504409 SPATA24Q86W54 205 aa7.27□□□□□ -1.25
LINC02397-201ENST00000504409 DAPK1P53355 1430 aa7.27□□□□□ -1.25
LINC02397-201ENST00000504409 RUFY2Q8WXA3 655 aa7.27□□□□□ -1.25
LINC02397-201ENST00000504409 PRKRIP1Q9H875 184 aaPredicted RBP7.27□□□□□ -1.25
LINC02397-201ENST00000504409 SMC4Q9NTJ3 1288 aa7.27□□□□□ -1.25
LINC02397-201ENST00000504409 USP25Q9UHP3 1055 aa7.27□□□□□ -1.25
LINC02397-201ENST00000504409 DDX12PQ92771 950 aa7.27□□□□□ -1.25
LINC02397-201ENST00000504409 MKRN1Q9UHC7 482 aaKnown RBP7.27□□□□□ -1.25
LINC02397-201ENST00000504409 ITSN2Q9NZM3 1697 aa7.27□□□□□ -1.25
LINC02397-201ENST00000504409 INTS3Q68E01 1043 aaKnown RBP7.27□□□□□ -1.25
LINC02397-201ENST00000504409 OGFRQ9NZT2 677 aa7.27□□□□□ -1.25
LINC02397-201ENST00000504409 DACH1Q9UI36 760 aa7.27□□□□□ -1.25
LINC02397-201ENST00000504409 SLMAPQ14BN4 828 aa7.27□□□□□ -1.25
LINC02397-201ENST00000504409 POTEDQ86YR6 584 aa7.27□□□□□ -1.25
LINC02397-201ENST00000504409 SUDS3Q9H7L9 328 aaPredicted RBP7.27□□□□□ -1.25
LINC02397-201ENST00000504409 ZNHIT6Q9NWK9 470 aaKnown RBP7.27□□□□□ -1.25
LINC02397-201ENST00000504409 CCDC83Q8IWF9 413 aa7.26□□□□□ -1.25
LINC02397-201ENST00000504409 UTP14AQ9BVJ6 771 aaKnown RBP7.26□□□□□ -1.25
LINC02397-201ENST00000504409 ZSCAN12O43309 604 aa7.26□□□□□ -1.25
LINC02397-201ENST00000504409 ERCC3P19447 782 aa7.26□□□□□ -1.25
LINC02397-201ENST00000504409 RGS3P49796 1198 aa7.26□□□□□ -1.25
LINC02397-201ENST00000504409 MYCBPQ99417 103 aaPredicted RBP7.26□□□□□ -1.25
LINC02397-201ENST00000504409 PSMD1Q99460 953 aa7.26□□□□□ -1.25
LINC02397-201ENST00000504409 DNAJC21Q5F1R6 531 aaKnown RBP7.26□□□□□ -1.25
LINC02397-201ENST00000504409 SMARCE1Q969G3 411 aa7.26□□□□□ -1.25
LINC02397-201ENST00000504409 UHRF1BP1LA0JNW5 1464 aa7.26□□□□□ -1.25
LINC02397-201ENST00000504409 SRPK2P78362 688 aaKnown RBP7.26□□□□□ -1.25
LINC02397-201ENST00000504409 PRDM2Q13029 1718 aa7.26□□□□□ -1.25
LINC02397-201ENST00000504409 CENPHQ9H3R5 247 aa7.26□□□□□ -1.25
LINC02397-201ENST00000504409 TRIM6-TRIM34B2RNG4 842 aa7.26□□□□□ -1.25
LINC02397-201ENST00000504409 TRIM34Q9BYJ4 488 aa7.26□□□□□ -1.25
LINC02397-201ENST00000504409 ERLIN2O94905 339 aa7.25□□□□□ -1.25
LINC02397-201ENST00000504409 WDR66Q8TBY9 1149 aa7.25□□□□□ -1.25
LINC02397-201ENST00000504409 GTF2F1P35269 517 aaKnown RBP eCLIP7.25□□□□□ -1.25
LINC02397-201ENST00000504409 TMCO3Q6UWJ1 677 aa7.25□□□□□ -1.25
LINC02397-201ENST00000504409 HFM1A2PYH4 1435 aa7.25□□□□□ -1.25
LINC02397-201ENST00000504409 TULP1O00294 542 aaPredicted RBP7.25□□□□□ -1.25
LINC02397-201ENST00000504409 PPM1EQ8WY54 764 aa7.25□□□□□ -1.25
LINC02397-201ENST00000504409 CTAGE5O15320 804 aa7.25□□□□□ -1.25
LINC02397-201ENST00000504409 ERC1Q8IUD2 1116 aa7.25□□□□□ -1.25
LINC02397-201ENST00000504409 RASSF4Q9H2L5 321 aa7.25□□□□□ -1.25
LINC02397-201ENST00000504409 RAPGEF2Q9Y4G8 1499 aa7.25□□□□□ -1.25
LINC02397-201ENST00000504409 SOGA1O94964 1423 aa7.25□□□□□ -1.25
LINC02397-201ENST00000504409 APLFQ8IW19 511 aaPredicted RBP7.25□□□□□ -1.25
LINC02397-201ENST00000504409 HIP1O00291 1037 aa7.24□□□□□ -1.25
LINC02397-201ENST00000504409 GTF2A1P52655 376 aaPredicted RBP7.24□□□□□ -1.25
LINC02397-201ENST00000504409 EHBP1Q8NDI1 1231 aa7.24□□□□□ -1.25
LINC02397-201ENST00000504409 KIF18AQ8NI77 898 aa7.24□□□□□ -1.25
LINC02397-201ENST00000504409 SALL2Q9Y467 1007 aaPredicted RBP7.24□□□□□ -1.25
LINC02397-201ENST00000504409 OFD1O75665 1012 aa7.24□□□□□ -1.25
LINC02397-201ENST00000504409 MRVI1Q9Y6F6 885 aa7.24□□□□□ -1.25
LINC02397-201ENST00000504409 MYO1BO43795 1136 aa7.24□□□□□ -1.25
LINC02397-201ENST00000504409 ANKRD18AQ8IVF6 992 aa7.24□□□□□ -1.25
LINC02397-201ENST00000504409 WDR33Q9C0J8 1336 aaKnown RBP7.24□□□□□ -1.25
LINC02397-201ENST00000504409 PLCD4Q9BRC7 762 aa7.24□□□□□ -1.25
LINC02397-201ENST00000504409 YY1AP1Q9H869 796 aa7.24□□□□□ -1.25
LINC02397-201ENST00000504409 YEATS2Q9ULM3 1422 aa7.24□□□□□ -1.25
LINC02397-201ENST00000504409 HSP90AB3PQ58FF7 597 aa7.24□□□□□ -1.25
LINC02397-201ENST00000504409 CTCFLQ8NI51 663 aaPredicted RBP7.24□□□□□ -1.25
LINC02397-201ENST00000504409 A0A1B0GUL7 405 aa7.24□□□□□ -1.25
LINC02397-201ENST00000504409 ANKRD1Q15327 319 aa7.24□□□□□ -1.25
LINC02397-201ENST00000504409 ATP8B1O43520 1251 aa7.23□□□□□ -1.25
LINC02397-201ENST00000504409 TOP2BQ02880 1626 aa7.23□□□□□ -1.25
LINC02397-201ENST00000504409 ELP1O95163 1332 aa7.23□□□□□ -1.25
LINC02397-201ENST00000504409 EZRP15311 586 aaKnown RBP7.23□□□□□ -1.25
LINC02397-201ENST00000504409 BBXQ8WY36 941 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 284.7 ms