RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 ANO8Q9HCE9 1232 aaPredicted RBP23.98■■□□□ 1.43
SCARB2-203ENST00000502908 SHPRHQ149N8 1683 aa23.97■■□□□ 1.43
SCARB2-203ENST00000502908 PPRC1Q5VV67 1664 aaKnown RBP23.97■■□□□ 1.43
SCARB2-203ENST00000502908 MTHFSP49914 203 aa23.97■■□□□ 1.43
SCARB2-203ENST00000502908 RARSP54136 660 aaKnown RBP23.97■■□□□ 1.43
SCARB2-203ENST00000502908 ABCA9Q8IUA7 1624 aa23.96■■□□□ 1.43
SCARB2-203ENST00000502908 IFT172Q9UG01 1749 aa23.96■■□□□ 1.43
SCARB2-203ENST00000502908 RUNDC1Q96C34 613 aa23.96■■□□□ 1.43
SCARB2-203ENST00000502908 PCDHB15Q9Y5E8 787 aa23.96■■□□□ 1.43
SCARB2-203ENST00000502908 EFCAB6Q5THR3 1501 aa23.96■■□□□ 1.43
SCARB2-203ENST00000502908 GGT6Q6P531 493 aa23.96■■□□□ 1.43
SCARB2-203ENST00000502908 ARAP3Q8WWN8 1544 aa23.95■■□□□ 1.42
SCARB2-203ENST00000502908 SLC24A1O60721 1099 aa23.93■■□□□ 1.42
SCARB2-203ENST00000502908 SLKQ9H2G2 1235 aaPredicted RBP23.93■■□□□ 1.42
SCARB2-203ENST00000502908 SAFB2Q14151 953 aaKnown RBP eCLIP23.93■■□□□ 1.42
SCARB2-203ENST00000502908 VIRMAQ69YN4 1812 aaKnown RBP23.91■■□□□ 1.42
SCARB2-203ENST00000502908 NGEFQ8N5V2 710 aa23.9■■□□□ 1.42
SCARB2-203ENST00000502908 MYO3AQ8NEV4 1616 aa23.9■■□□□ 1.42
SCARB2-203ENST00000502908 QRICH2Q9H0J4 1663 aa23.9■■□□□ 1.42
SCARB2-203ENST00000502908 NRXN1Q9ULB1 1477 aa23.89■■□□□ 1.42
SCARB2-203ENST00000502908 MAPK8IP3Q9UPT6 1336 aa23.89■■□□□ 1.41
SCARB2-203ENST00000502908 SBNO2Q9Y2G9 1366 aa23.89■■□□□ 1.41
SCARB2-203ENST00000502908 KIDINS220Q9ULH0 1771 aa23.88■■□□□ 1.41
SCARB2-203ENST00000502908 NEURL4Q96JN8 1562 aa23.88■■□□□ 1.41
SCARB2-203ENST00000502908 U2AF1L5P0DN76 240 aaPredicted RBP23.88■■□□□ 1.41
SCARB2-203ENST00000502908 U2AF1Q01081 240 aaKnown RBP eCLIP23.88■■□□□ 1.41
SCARB2-203ENST00000502908 IQSEC2Q5JU85 1478 aa23.87■■□□□ 1.41
SCARB2-203ENST00000502908 C14orf93Q9H972 538 aaKnown RBP23.87■■□□□ 1.41
SCARB2-203ENST00000502908 PDZRN3Q9UPQ7 1066 aa23.87■■□□□ 1.41
SCARB2-203ENST00000502908 ADGRB3O60242 1522 aa23.86■■□□□ 1.41
SCARB2-203ENST00000502908 TSR2Q969E8 191 aaKnown RBP23.86■■□□□ 1.41
SCARB2-203ENST00000502908 NINLQ9Y2I6 1382 aa23.86■■□□□ 1.41
SCARB2-203ENST00000502908 CABP2Q9NPB3 220 aa23.85■■□□□ 1.41
SCARB2-203ENST00000502908 NPATQ14207 1427 aa23.85■■□□□ 1.41
SCARB2-203ENST00000502908 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
SCARB2-203ENST00000502908 ZNF518AQ6AHZ1 1483 aa23.83■■□□□ 1.41
SCARB2-203ENST00000502908 NLRP1Q9C000 1473 aa23.83■■□□□ 1.41
SCARB2-203ENST00000502908 PMFBP1Q8TBY8 1022 aa23.83■■□□□ 1.41
SCARB2-203ENST00000502908 CFAP53Q96M91 514 aa23.83■■□□□ 1.41
SCARB2-203ENST00000502908 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.83■■□□□ 1.41
SCARB2-203ENST00000502908 ZC3H13Q5T200 1668 aaKnown RBP23.83■■□□□ 1.4
SCARB2-203ENST00000502908 ASXL2Q76L83 1435 aa23.83■■□□□ 1.4
SCARB2-203ENST00000502908 WDR63Q8IWG1 891 aa23.82■■□□□ 1.4
SCARB2-203ENST00000502908 ADGRB1O14514 1584 aa23.82■■□□□ 1.4
SCARB2-203ENST00000502908 SPRYD3Q8NCJ5 442 aa23.82■■□□□ 1.4
SCARB2-203ENST00000502908 POGKQ9P215 609 aa23.81■■□□□ 1.4
SCARB2-203ENST00000502908 SETBP1Q9Y6X0 1596 aa23.81■■□□□ 1.4
SCARB2-203ENST00000502908 PPLO60437 1756 aa23.8■■□□□ 1.4
SCARB2-203ENST00000502908 U2SURPO15042 1029 aaKnown RBP23.8■■□□□ 1.4
SCARB2-203ENST00000502908 STK26Q9P289 416 aa23.78■■□□□ 1.4
SCARB2-203ENST00000502908 BECN1Q14457 450 aa23.78■■□□□ 1.4
SCARB2-203ENST00000502908 FTSJ3Q8IY81 847 aaKnown RBP23.78■■□□□ 1.4
SCARB2-203ENST00000502908 GGNBP2Q9H3C7 697 aa23.77■■□□□ 1.4
SCARB2-203ENST00000502908 MYH16Q9H6N6 1097 aa23.76■■□□□ 1.39
SCARB2-203ENST00000502908 MVPQ14764 893 aaKnown RBP23.76■■□□□ 1.39
SCARB2-203ENST00000502908 RWDD1Q9H446 243 aaPredicted RBP23.75■■□□□ 1.39
SCARB2-203ENST00000502908 UPF2Q9HAU5 1272 aaKnown RBP23.75■■□□□ 1.39
SCARB2-203ENST00000502908 EVC2Q86UK5 1308 aa23.75■■□□□ 1.39
SCARB2-203ENST00000502908 EXOSC9Q06265 439 aaKnown RBP23.74■■□□□ 1.39
SCARB2-203ENST00000502908 LMTK2Q8IWU2 1503 aa23.74■■□□□ 1.39
SCARB2-203ENST00000502908 TULP4Q9NRJ4 1543 aa23.74■■□□□ 1.39
SCARB2-203ENST00000502908 CCDC27Q2M243 656 aa23.74■■□□□ 1.39
SCARB2-203ENST00000502908 TBC1D32Q96NH3 1257 aa23.74■■□□□ 1.39
SCARB2-203ENST00000502908 SMC4Q9NTJ3 1288 aa23.74■■□□□ 1.39
SCARB2-203ENST00000502908 ZKSCAN2Q63HK3 967 aa23.73■■□□□ 1.39
SCARB2-203ENST00000502908 TBC1D2Q9BYX2 928 aa23.73■■□□□ 1.39
SCARB2-203ENST00000502908 GLI2P10070 1586 aa23.73■■□□□ 1.39
SCARB2-203ENST00000502908 DZIP1LQ8IYY4 767 aaKnown RBP23.73■■□□□ 1.39
SCARB2-203ENST00000502908 ARXQ96QS3 562 aa23.73■■□□□ 1.39
SCARB2-203ENST00000502908 ANKRD36BQ8N2N9 1353 aa23.71■■□□□ 1.39
SCARB2-203ENST00000502908 SRPK2P78362 688 aaKnown RBP23.71■■□□□ 1.39
SCARB2-203ENST00000502908 FRMPD1Q5SYB0 1578 aa23.71■■□□□ 1.39
SCARB2-203ENST00000502908 ITPRIPQ8IWB1 547 aa23.7■■□□□ 1.38
SCARB2-203ENST00000502908 TRIM27P14373 513 aa23.7■■□□□ 1.38
SCARB2-203ENST00000502908 ANTXR1Q9H6X2 564 aa23.69■■□□□ 1.38
SCARB2-203ENST00000502908 MFAP1P55081 439 aaKnown RBP23.69■■□□□ 1.38
SCARB2-203ENST00000502908 SSH1Q8WYL5 1049 aa23.69■■□□□ 1.38
SCARB2-203ENST00000502908 A0A1W2PP64 1363 aa23.69■■□□□ 1.38
SCARB2-203ENST00000502908 CD109Q6YHK3 1445 aa23.68■■□□□ 1.38
SCARB2-203ENST00000502908 USP32Q8NFA0 1604 aa23.68■■□□□ 1.38
SCARB2-203ENST00000502908 RAPGEF3O95398 923 aa23.67■■□□□ 1.38
SCARB2-203ENST00000502908 TRIM35Q9UPQ4 493 aa23.67■■□□□ 1.38
SCARB2-203ENST00000502908 ARHGEF28Q8N1W1 1705 aaKnown RBP23.67■■□□□ 1.38
SCARB2-203ENST00000502908 TMPOP42166 694 aaKnown RBP23.67■■□□□ 1.38
SCARB2-203ENST00000502908 SIGLEC1Q9BZZ2 1709 aa23.67■■□□□ 1.38
SCARB2-203ENST00000502908 MINK1Q8N4C8 1332 aaPredicted RBP23.66■■□□□ 1.38
SCARB2-203ENST00000502908 PLEKHF1Q96S99 279 aa23.66■■□□□ 1.38
SCARB2-203ENST00000502908 NOB1Q9ULX3 412 aaKnown RBP23.65■■□□□ 1.38
SCARB2-203ENST00000502908 AAMPQ13685 434 aa23.65■■□□□ 1.38
SCARB2-203ENST00000502908 CAMSAP1Q5T5Y3 1602 aa23.65■■□□□ 1.38
SCARB2-203ENST00000502908 VGFO15240 615 aaPredicted RBP23.64■■□□□ 1.37
SCARB2-203ENST00000502908 ABCC3O15438 1527 aa23.64■■□□□ 1.37
SCARB2-203ENST00000502908 RPGRIP1LQ68CZ1 1315 aa23.64■■□□□ 1.37
SCARB2-203ENST00000502908 POGZQ7Z3K3 1410 aa23.64■■□□□ 1.37
SCARB2-203ENST00000502908 FBLN1P23142 703 aa23.63■■□□□ 1.37
SCARB2-203ENST00000502908 ADGRB2O60241 1585 aa23.63■■□□□ 1.37
SCARB2-203ENST00000502908 IDI1Q13907 227 aa23.62■■□□□ 1.37
SCARB2-203ENST00000502908 TMEM57Q8N5G2 664 aa23.62■■□□□ 1.37
SCARB2-203ENST00000502908 HECW2Q9P2P5 1572 aa23.62■■□□□ 1.37
SCARB2-203ENST00000502908 RIPK4P57078 832 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms