RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 ADGRB1O14514 1584 aa36.23■■■■□ 3.39
TRIO-204ENST00000502816 PLEKHH1Q9ULM0 1364 aa36.2■■■■□ 3.39
TRIO-204ENST00000502816 DLC1Q96QB1 1528 aa36.19■■■■□ 3.38
TRIO-204ENST00000502816 PHF23Q9BUL5 403 aaPredicted RBP36.19■■■■□ 3.38
TRIO-204ENST00000502816 SPATA31A6Q5VVP1 1343 aa36.18■■■■□ 3.38
TRIO-204ENST00000502816 KDM2AQ9Y2K7 1162 aa36.17■■■■□ 3.38
TRIO-204ENST00000502816 RGS17Q9UGC6 210 aaPredicted RBP36.15■■■■□ 3.38
TRIO-204ENST00000502816 ORAI2Q96SN7 254 aa36.14■■■■□ 3.38
TRIO-204ENST00000502816 LRRC59Q96AG4 307 aaKnown RBP36.12■■■■□ 3.37
TRIO-204ENST00000502816 SOCS7O14512 581 aa36.11■■■■□ 3.37
TRIO-204ENST00000502816 FMN2Q9NZ56 1722 aa36.11■■■■□ 3.37
TRIO-204ENST00000502816 SOS2Q07890 1332 aaPredicted RBP36.08■■■■□ 3.37
TRIO-204ENST00000502816 DDX17Q92841 729 aaKnown RBP36.08■■■■□ 3.37
TRIO-204ENST00000502816 KIAA1210Q9ULL0 1709 aa36.06■■■■□ 3.36
TRIO-204ENST00000502816 LRP6O75581 1613 aa36.06■■■■□ 3.36
TRIO-204ENST00000502816 PRAM1Q96QH2 718 aa36.05■■■■□ 3.36
TRIO-204ENST00000502816 ESCO1Q5FWF5 840 aa36.02■■■■□ 3.36
TRIO-204ENST00000502816 ADGRB2O60241 1585 aa36.01■■■■□ 3.35
TRIO-204ENST00000502816 PNPLA6Q8IY17 1366 aa36■■■■□ 3.35
TRIO-204ENST00000502816 TRIM26Q12899 539 aaPredicted RBP35.98■■■■□ 3.35
TRIO-204ENST00000502816 TRAK1Q9UPV9 953 aa35.98■■■■□ 3.35
TRIO-204ENST00000502816 NPHP3Q7Z494 1330 aa35.98■■■■□ 3.35
TRIO-204ENST00000502816 POGKQ9P215 609 aa35.97■■■■□ 3.35
TRIO-204ENST00000502816 KIF1AQ12756 1690 aa35.96■■■■□ 3.35
TRIO-204ENST00000502816 PXDNQ92626 1479 aa35.95■■■■□ 3.35
TRIO-204ENST00000502816 RGPD8O14715 1765 aaPredicted RBP35.94■■■■□ 3.34
TRIO-204ENST00000502816 ARHGEF28Q8N1W1 1705 aaKnown RBP35.94■■■■□ 3.34
TRIO-204ENST00000502816 NUTM2FA1L443 756 aa35.92■■■■□ 3.34
TRIO-204ENST00000502816 SAFB2Q14151 953 aaKnown RBP eCLIP35.91■■■■□ 3.34
TRIO-204ENST00000502816 POTEAQ6S8J7 498 aa35.91■■■■□ 3.34
TRIO-204ENST00000502816 COL22A1Q8NFW1 1626 aaPredicted RBP35.9■■■■□ 3.34
TRIO-204ENST00000502816 FOXO3O43524 673 aa35.9■■■■□ 3.34
TRIO-204ENST00000502816 SIN3AQ96ST3 1273 aa35.9■■■■□ 3.34
TRIO-204ENST00000502816 L3MBTL2Q969R5 705 aa35.89■■■■□ 3.34
TRIO-204ENST00000502816 ANKARQ7Z5J8 1434 aa35.89■■■■□ 3.34
TRIO-204ENST00000502816 USP32Q8NFA0 1604 aa35.88■■■■□ 3.33
TRIO-204ENST00000502816 MEX3CQ5U5Q3 659 aaKnown RBP35.86■■■■□ 3.33
TRIO-204ENST00000502816 NUTM2BA6NNL0 878 aaPredicted RBP35.84■■■■□ 3.33
TRIO-204ENST00000502816 NUTM2EB1AL46 878 aaPredicted RBP35.84■■■■□ 3.33
TRIO-204ENST00000502816 NUTM2AQ8IVF1 878 aaPredicted RBP35.84■■■■□ 3.33
TRIO-204ENST00000502816 PHF8Q9UPP1 1060 aa35.83■■■■□ 3.33
TRIO-204ENST00000502816 NBPF1Q3BBV0 1214 aa35.82■■■■□ 3.32
TRIO-204ENST00000502816 EIF3AQ14152 1382 aaKnown RBP35.81■■■■□ 3.32
TRIO-204ENST00000502816 ZNF772Q68DY9 489 aaPredicted RBP35.81■■■■□ 3.32
TRIO-204ENST00000502816 MINK1Q8N4C8 1332 aaPredicted RBP35.81■■■■□ 3.32
TRIO-204ENST00000502816 WASLO00401 505 aaPredicted RBP35.8■■■■□ 3.32
TRIO-204ENST00000502816 TULP4Q9NRJ4 1543 aa35.79■■■■□ 3.32
TRIO-204ENST00000502816 HIRIP3Q9BW71 556 aaPredicted RBP35.79■■■■□ 3.32
TRIO-204ENST00000502816 XPCQ01831 940 aaPredicted RBP35.76■■■■□ 3.32
TRIO-204ENST00000502816 NEUROD1Q13562 356 aa35.76■■■■□ 3.32
TRIO-204ENST00000502816 SPATA31A3Q5VYP0 1347 aa35.76■■■■□ 3.31
TRIO-204ENST00000502816 KRT28Q7Z3Y7 464 aa35.75■■■■□ 3.31
TRIO-204ENST00000502816 TRPM1Q7Z4N2 1603 aa35.74■■■■□ 3.31
TRIO-204ENST00000502816 PRR36Q9H6K5 1346 aa35.74■■■■□ 3.31
TRIO-204ENST00000502816 PSME1Q06323 249 aa35.71■■■■□ 3.31
TRIO-204ENST00000502816 SBNO1A3KN83 1393 aa35.7■■■■□ 3.31
TRIO-204ENST00000502816 AFF2P51816 1311 aa35.7■■■■□ 3.31
TRIO-204ENST00000502816 MARF1Q9Y4F3 1742 aaKnown RBP35.68■■■■□ 3.3
TRIO-204ENST00000502816 ITSN1Q15811 1721 aa35.66■■■■□ 3.3
TRIO-204ENST00000502816 C8orf37Q96NL8 207 aa35.66■■■■□ 3.3
TRIO-204ENST00000502816 ATP7BP35670 1465 aa35.66■■■■□ 3.3
TRIO-204ENST00000502816 TNS3Q68CZ2 1445 aa35.66■■■■□ 3.3
TRIO-204ENST00000502816 ADAMTS2O95450 1211 aa35.65■■■■□ 3.3
TRIO-204ENST00000502816 PMFBP1Q8TBY8 1022 aa35.65■■■■□ 3.3
TRIO-204ENST00000502816 TRPM3Q9HCF6 1732 aaPredicted RBP35.63■■■■□ 3.29
TRIO-204ENST00000502816 FNBP4Q8N3X1 1017 aaPredicted RBP35.62■■■■□ 3.29
TRIO-204ENST00000502816 CDK19Q9BWU1 502 aa35.62■■■■□ 3.29
TRIO-204ENST00000502816 CENPJQ9HC77 1338 aaPredicted RBP35.61■■■■□ 3.29
TRIO-204ENST00000502816 NUDT16Q96DE0 195 aaKnown RBP35.61■■■■□ 3.29
TRIO-204ENST00000502816 NGLY1Q96IV0 654 aa35.61■■■■□ 3.29
TRIO-204ENST00000502816 TOPAZ1Q8N9V7 1692 aa35.59■■■■□ 3.29
TRIO-204ENST00000502816 ARHGEF10O15013 1369 aa35.58■■■■□ 3.29
TRIO-204ENST00000502816 CDK12Q9NYV4 1490 aaPredicted RBP35.58■■■■□ 3.29
TRIO-204ENST00000502816 QRICH2Q9H0J4 1663 aa35.57■■■■□ 3.28
TRIO-204ENST00000502816 GPRASP1Q5JY77 1395 aa35.57■■■■□ 3.28
TRIO-204ENST00000502816 RXRBP28702 533 aa35.57■■■■□ 3.28
TRIO-204ENST00000502816 NBPF8Q3BBV2 869 aa35.57■■■■□ 3.28
TRIO-204ENST00000502816 ALS2Q96Q42 1657 aa35.56■■■■□ 3.28
TRIO-204ENST00000502816 QTRT2Q9H974 415 aaKnown RBP35.55■■■■□ 3.28
TRIO-204ENST00000502816 ROCK2O75116 1388 aaKnown RBP35.54■■■■□ 3.28
TRIO-204ENST00000502816 CCDC61Q9Y6R9 512 aa35.53■■■■□ 3.28
TRIO-204ENST00000502816 ABCA3Q99758 1704 aa35.52■■■■□ 3.28
TRIO-204ENST00000502816 POLR3AO14802 1390 aaPredicted RBP35.51■■■■□ 3.28
TRIO-204ENST00000502816 PLEKHG3A1L390 1219 aa35.51■■■■□ 3.28
TRIO-204ENST00000502816 NGDNQ8NEJ9 315 aaKnown RBP35.51■■■■□ 3.28
TRIO-204ENST00000502816 TONSLQ96HA7 1378 aa35.51■■■■□ 3.27
TRIO-204ENST00000502816 USP21Q9UK80 565 aa35.5■■■■□ 3.27
TRIO-204ENST00000502816 RBM6P78332 1123 aaKnown RBP35.49■■■■□ 3.27
TRIO-204ENST00000502816 BCL9LQ86UU0 1499 aa35.48■■■■□ 3.27
TRIO-204ENST00000502816 TRPC5Q9UL62 973 aaPredicted RBP35.46■■■■□ 3.27
TRIO-204ENST00000502816 ATRNO75882 1429 aa35.46■■■■□ 3.27
TRIO-204ENST00000502816 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.46■■■■□ 3.27
TRIO-204ENST00000502816 SLIT2O94813 1529 aa35.45■■■■□ 3.27
TRIO-204ENST00000502816 RALGAPBQ86X10 1494 aa35.43■■■■□ 3.26
TRIO-204ENST00000502816 ACEP12821 1306 aa35.42■■■■□ 3.26
TRIO-204ENST00000502816 CABLES1Q8TDN4 633 aa35.42■■■■□ 3.26
TRIO-204ENST00000502816 CRYBG1Q9Y4K1 1723 aa35.42■■■■□ 3.26
TRIO-204ENST00000502816 LMOD2Q6P5Q4 547 aa35.41■■■■□ 3.26
TRIO-204ENST00000502816 SRPK2P78362 688 aaKnown RBP35.4■■■■□ 3.26
TRIO-204ENST00000502816 CABP2Q9NPB3 220 aa35.39■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms