RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GPRASP1Q5JY77 1395 aa35.93■■■■□ 3.34
LSM6-202ENST00000502781 ATF3P18847 181 aa35.92■■■■□ 3.34
LSM6-202ENST00000502781 ROCK2O75116 1388 aaKnown RBP35.91■■■■□ 3.34
LSM6-202ENST00000502781 RALGAPBQ86X10 1494 aa35.9■■■■□ 3.34
LSM6-202ENST00000502781 SLAIN2Q9P270 581 aa35.89■■■■□ 3.34
LSM6-202ENST00000502781 PIP4K2BP78356 416 aa35.89■■■■□ 3.34
LSM6-202ENST00000502781 POGKQ9P215 609 aa35.88■■■■□ 3.33
LSM6-202ENST00000502781 ARHGEF28Q8N1W1 1705 aaKnown RBP35.87■■■■□ 3.33
LSM6-202ENST00000502781 CDC42BPGQ6DT37 1551 aa35.86■■■■□ 3.33
LSM6-202ENST00000502781 MST1RQ04912 1400 aa35.85■■■■□ 3.33
LSM6-202ENST00000502781 SAFB2Q14151 953 aaKnown RBP eCLIP35.83■■■■□ 3.33
LSM6-202ENST00000502781 SCAF1Q9H7N4 1312 aaKnown RBP35.82■■■■□ 3.32
LSM6-202ENST00000502781 ADGRB2O60241 1585 aa35.78■■■■□ 3.32
LSM6-202ENST00000502781 CARD11Q9BXL7 1154 aa35.76■■■■□ 3.32
LSM6-202ENST00000502781 C1orf167Q5SNV9 1468 aa35.76■■■■□ 3.31
LSM6-202ENST00000502781 ROBO1Q9Y6N7 1651 aa35.74■■■■□ 3.31
LSM6-202ENST00000502781 CENPJQ9HC77 1338 aaPredicted RBP35.74■■■■□ 3.31
LSM6-202ENST00000502781 MINK1Q8N4C8 1332 aaPredicted RBP35.73■■■■□ 3.31
LSM6-202ENST00000502781 BRINP3Q76B58 766 aa35.72■■■■□ 3.31
LSM6-202ENST00000502781 HIRIP3Q9BW71 556 aaPredicted RBP35.7■■■■□ 3.31
LSM6-202ENST00000502781 EIF3AQ14152 1382 aaKnown RBP35.69■■■■□ 3.3
LSM6-202ENST00000502781 FMN2Q9NZ56 1722 aa35.69■■■■□ 3.3
LSM6-202ENST00000502781 HSPA1LP34931 641 aa35.66■■■■□ 3.3
LSM6-202ENST00000502781 WASLO00401 505 aaPredicted RBP35.65■■■■□ 3.3
LSM6-202ENST00000502781 ORAI2Q96SN7 254 aa35.64■■■■□ 3.3
LSM6-202ENST00000502781 ANKARQ7Z5J8 1434 aa35.62■■■■□ 3.29
LSM6-202ENST00000502781 NUTM2FA1L443 756 aa35.61■■■■□ 3.29
LSM6-202ENST00000502781 QRICH2Q9H0J4 1663 aa35.6■■■■□ 3.29
LSM6-202ENST00000502781 SBNO2Q9Y2G9 1366 aa35.59■■■■□ 3.29
LSM6-202ENST00000502781 AHDC1Q5TGY3 1603 aaPredicted RBP35.58■■■■□ 3.29
LSM6-202ENST00000502781 TULP4Q9NRJ4 1543 aa35.58■■■■□ 3.29
LSM6-202ENST00000502781 ESCO1Q5FWF5 840 aa35.56■■■■□ 3.28
LSM6-202ENST00000502781 PRR36Q9H6K5 1346 aa35.56■■■■□ 3.28
LSM6-202ENST00000502781 USP32Q8NFA0 1604 aa35.56■■■■□ 3.28
LSM6-202ENST00000502781 CDK19Q9BWU1 502 aa35.55■■■■□ 3.28
LSM6-202ENST00000502781 NHSL1Q5SYE7 1610 aa35.51■■■■□ 3.28
LSM6-202ENST00000502781 USP47Q96K76 1375 aa35.51■■■■□ 3.28
LSM6-202ENST00000502781 ATP7BP35670 1465 aa35.51■■■■□ 3.27
LSM6-202ENST00000502781 ST20-MTHFSA0A0A6YYL1 179 aa35.48■■■■□ 3.27
LSM6-202ENST00000502781 NUDT16Q96DE0 195 aaKnown RBP35.48■■■■□ 3.27
LSM6-202ENST00000502781 COL16A1Q07092 1604 aaPredicted RBP35.48■■■■□ 3.27
LSM6-202ENST00000502781 PHLPP1O60346 1717 aa35.48■■■■□ 3.27
LSM6-202ENST00000502781 RGPD8O14715 1765 aaPredicted RBP35.47■■■■□ 3.27
LSM6-202ENST00000502781 EVC2Q86UK5 1308 aa35.47■■■■□ 3.27
LSM6-202ENST00000502781 DDX17Q92841 729 aaKnown RBP35.47■■■■□ 3.27
LSM6-202ENST00000502781 TESK2Q96S53 571 aa35.47■■■■□ 3.27
LSM6-202ENST00000502781 PHF8Q9UPP1 1060 aa35.47■■■■□ 3.27
LSM6-202ENST00000502781 KIF1AQ12756 1690 aa35.45■■■■□ 3.27
LSM6-202ENST00000502781 SOS2Q07890 1332 aaPredicted RBP35.44■■■■□ 3.26
LSM6-202ENST00000502781 NPHP3Q7Z494 1330 aa35.44■■■■□ 3.26
LSM6-202ENST00000502781 FOXO3O43524 673 aa35.43■■■■□ 3.26
LSM6-202ENST00000502781 SRPK2P78362 688 aaKnown RBP35.42■■■■□ 3.26
LSM6-202ENST00000502781 CABP2Q9NPB3 220 aa35.42■■■■□ 3.26
LSM6-202ENST00000502781 CCDC61Q9Y6R9 512 aa35.41■■■■□ 3.26
LSM6-202ENST00000502781 PXDNQ92626 1479 aa35.4■■■■□ 3.26
LSM6-202ENST00000502781 SLC24A1O60721 1099 aa35.38■■■■□ 3.25
LSM6-202ENST00000502781 TOPAZ1Q8N9V7 1692 aa35.37■■■■□ 3.25
LSM6-202ENST00000502781 PMFBP1Q8TBY8 1022 aa35.37■■■■□ 3.25
LSM6-202ENST00000502781 ITSN1Q15811 1721 aa35.35■■■■□ 3.25
LSM6-202ENST00000502781 JCADQ9P266 1359 aa35.35■■■■□ 3.25
LSM6-202ENST00000502781 PLEKHG3A1L390 1219 aa35.35■■■■□ 3.25
LSM6-202ENST00000502781 LRRC59Q96AG4 307 aaKnown RBP35.35■■■■□ 3.25
LSM6-202ENST00000502781 PUS7Q96PZ0 661 aaKnown RBP35.32■■■■□ 3.24
LSM6-202ENST00000502781 POLR3AO14802 1390 aaPredicted RBP35.31■■■■□ 3.24
LSM6-202ENST00000502781 ATAD2Q6PL18 1390 aa35.3■■■■□ 3.24
LSM6-202ENST00000502781 PPIP5K1Q6PFW1 1433 aa35.3■■■■□ 3.24
LSM6-202ENST00000502781 EIF4G2P78344 907 aaKnown RBP eCLIP35.3■■■■□ 3.24
LSM6-202ENST00000502781 XPCQ01831 940 aaPredicted RBP35.3■■■■□ 3.24
LSM6-202ENST00000502781 KRT28Q7Z3Y7 464 aa35.29■■■■□ 3.24
LSM6-202ENST00000502781 NGDNQ8NEJ9 315 aaKnown RBP35.27■■■■□ 3.24
LSM6-202ENST00000502781 PSME1Q06323 249 aa35.26■■■■□ 3.24
LSM6-202ENST00000502781 HSPA5P11021 654 aaKnown RBP35.25■■■■□ 3.23
LSM6-202ENST00000502781 CABP1Q9NZU7 370 aa35.25■■■■□ 3.23
LSM6-202ENST00000502781 ACEP12821 1306 aa35.25■■■■□ 3.23
LSM6-202ENST00000502781 PNPLA6Q8IY17 1366 aa35.25■■■■□ 3.23
LSM6-202ENST00000502781 DISP3Q9P2K9 1392 aa35.25■■■■□ 3.23
LSM6-202ENST00000502781 TMF1P82094 1093 aa35.25■■■■□ 3.23
LSM6-202ENST00000502781 SHPRHQ149N8 1683 aa35.24■■■■□ 3.23
LSM6-202ENST00000502781 SBNO1A3KN83 1393 aa35.24■■■■□ 3.23
LSM6-202ENST00000502781 SPATA31A3Q5VYP0 1347 aa35.23■■■■□ 3.23
LSM6-202ENST00000502781 SPATA31A6Q5VVP1 1343 aa35.19■■■■□ 3.22
LSM6-202ENST00000502781 TNS3Q68CZ2 1445 aa35.19■■■■□ 3.22
LSM6-202ENST00000502781 TRPM3Q9HCF6 1732 aaPredicted RBP35.17■■■■□ 3.22
LSM6-202ENST00000502781 CPSF1Q10570 1443 aaKnown RBP35.14■■■■□ 3.22
LSM6-202ENST00000502781 CDCA8Q53HL2 280 aa35.13■■■■□ 3.21
LSM6-202ENST00000502781 COL22A1Q8NFW1 1626 aaPredicted RBP35.13■■■■□ 3.21
LSM6-202ENST00000502781 BRD4O60885 1362 aaPredicted RBP35.12■■■■□ 3.21
LSM6-202ENST00000502781 NINLQ9Y2I6 1382 aa35.12■■■■□ 3.21
LSM6-202ENST00000502781 USP6P35125 1406 aa35.11■■■■□ 3.21
LSM6-202ENST00000502781 SLC12A5Q9H2X9 1139 aa35.11■■■■□ 3.21
LSM6-202ENST00000502781 MED1Q15648 1581 aaPredicted RBP35.1■■■■□ 3.21
LSM6-202ENST00000502781 CD163L1Q9NR16 1453 aa35.1■■■■□ 3.21
LSM6-202ENST00000502781 ARHGEF10O15013 1369 aa35.1■■■■□ 3.21
LSM6-202ENST00000502781 ZNF692Q9BU19 519 aaPredicted RBP35.1■■■■□ 3.21
LSM6-202ENST00000502781 SSH2Q76I76 1423 aa35.09■■■■□ 3.21
LSM6-202ENST00000502781 LRP6O75581 1613 aa35.08■■■■□ 3.21
LSM6-202ENST00000502781 ALS2Q96Q42 1657 aa35.08■■■■□ 3.21
LSM6-202ENST00000502781 TMC1Q8TDI8 760 aa35.07■■■■□ 3.2
LSM6-202ENST00000502781 PAK3O75914 559 aaPredicted RBP35.03■■■■□ 3.2
LSM6-202ENST00000502781 AKAP12Q02952 1782 aa35.03■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms