RNA–Protein interactions for RNA: ENST00000502751.5

LMNA-219, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-219ENST00000502751 NUTM2BA6NNL0 878 aaPredicted RBP24.11■■□□□ 1.45
LMNA-219ENST00000502751 NUTM2EB1AL46 878 aaPredicted RBP24.11■■□□□ 1.45
LMNA-219ENST00000502751 NUTM2AQ8IVF1 878 aaPredicted RBP24.11■■□□□ 1.45
LMNA-219ENST00000502751 PLEKHH1Q9ULM0 1364 aa24.11■■□□□ 1.45
LMNA-219ENST00000502751 MEX3CQ5U5Q3 659 aaKnown RBP24.1■■□□□ 1.45
LMNA-219ENST00000502751 MYOM2P54296 1465 aa24.1■■□□□ 1.45
LMNA-219ENST00000502751 NHSL1Q5SYE7 1610 aa24.09■■□□□ 1.45
LMNA-219ENST00000502751 ESCO1Q5FWF5 840 aa24.08■■□□□ 1.45
LMNA-219ENST00000502751 DCAF11Q8TEB1 546 aa24.08■■□□□ 1.45
LMNA-219ENST00000502751 KDM2AQ9Y2K7 1162 aa24.08■■□□□ 1.45
LMNA-219ENST00000502751 SHPRHQ149N8 1683 aa24.08■■□□□ 1.44
LMNA-219ENST00000502751 DHX57Q6P158 1386 aaKnown RBP24.07■■□□□ 1.44
LMNA-219ENST00000502751 SOS2Q07890 1332 aaPredicted RBP24.07■■□□□ 1.44
LMNA-219ENST00000502751 NUTM2FA1L443 756 aa24.05■■□□□ 1.44
LMNA-219ENST00000502751 TRIM26Q12899 539 aaPredicted RBP24.05■■□□□ 1.44
LMNA-219ENST00000502751 PNPLA6Q8IY17 1366 aa24.03■■□□□ 1.44
LMNA-219ENST00000502751 STAC3Q96MF2 364 aa24.03■■□□□ 1.44
LMNA-219ENST00000502751 ZNF772Q68DY9 489 aaPredicted RBP24.02■■□□□ 1.44
LMNA-219ENST00000502751 CDC42BPGQ6DT37 1551 aa24.02■■□□□ 1.44
LMNA-219ENST00000502751 FOXO3O43524 673 aa24.01■■□□□ 1.43
LMNA-219ENST00000502751 PRAM1Q96QH2 718 aa24.01■■□□□ 1.43
LMNA-219ENST00000502751 LAMC1P11047 1609 aa24■■□□□ 1.43
LMNA-219ENST00000502751 KNDC1Q76NI1 1749 aa24■■□□□ 1.43
LMNA-219ENST00000502751 SAFB2Q14151 953 aaKnown RBP eCLIP23.99■■□□□ 1.43
LMNA-219ENST00000502751 NPHP3Q7Z494 1330 aa23.98■■□□□ 1.43
LMNA-219ENST00000502751 POGKQ9P215 609 aa23.97■■□□□ 1.43
LMNA-219ENST00000502751 TRAK1Q9UPV9 953 aa23.97■■□□□ 1.43
LMNA-219ENST00000502751 XPCQ01831 940 aaPredicted RBP23.96■■□□□ 1.43
LMNA-219ENST00000502751 AFF2P51816 1311 aa23.94■■□□□ 1.42
LMNA-219ENST00000502751 ADAMTS2O95450 1211 aa23.94■■□□□ 1.42
LMNA-219ENST00000502751 C8orf37Q96NL8 207 aa23.94■■□□□ 1.42
LMNA-219ENST00000502751 ADGRB1O14514 1584 aa23.94■■□□□ 1.42
LMNA-219ENST00000502751 DLC1Q96QB1 1528 aa23.91■■□□□ 1.42
LMNA-219ENST00000502751 PXDNQ92626 1479 aa23.91■■□□□ 1.42
LMNA-219ENST00000502751 RXRBP28702 533 aa23.9■■□□□ 1.42
LMNA-219ENST00000502751 NGLY1Q96IV0 654 aa23.9■■□□□ 1.42
LMNA-219ENST00000502751 PHF8Q9UPP1 1060 aa23.89■■□□□ 1.41
LMNA-219ENST00000502751 FMN2Q9NZ56 1722 aa23.89■■□□□ 1.41
LMNA-219ENST00000502751 KRT28Q7Z3Y7 464 aa23.88■■□□□ 1.41
LMNA-219ENST00000502751 HIRIP3Q9BW71 556 aaPredicted RBP23.87■■□□□ 1.41
LMNA-219ENST00000502751 QTRT2Q9H974 415 aaKnown RBP23.87■■□□□ 1.41
LMNA-219ENST00000502751 MINK1Q8N4C8 1332 aaPredicted RBP23.85■■□□□ 1.41
LMNA-219ENST00000502751 SPATA31A3Q5VYP0 1347 aa23.84■■□□□ 1.41
LMNA-219ENST00000502751 FNBP4Q8N3X1 1017 aaPredicted RBP23.83■■□□□ 1.41
LMNA-219ENST00000502751 PSME1Q06323 249 aa23.82■■□□□ 1.4
LMNA-219ENST00000502751 PMFBP1Q8TBY8 1022 aa23.82■■□□□ 1.4
LMNA-219ENST00000502751 COL22A1Q8NFW1 1626 aaPredicted RBP23.81■■□□□ 1.4
LMNA-219ENST00000502751 WASLO00401 505 aaPredicted RBP23.81■■□□□ 1.4
LMNA-219ENST00000502751 USP21Q9UK80 565 aa23.81■■□□□ 1.4
LMNA-219ENST00000502751 RBM6P78332 1123 aaKnown RBP23.8■■□□□ 1.4
LMNA-219ENST00000502751 NBPF1Q3BBV0 1214 aa23.8■■□□□ 1.4
LMNA-219ENST00000502751 RGPD8O14715 1765 aaPredicted RBP23.8■■□□□ 1.4
LMNA-219ENST00000502751 ANKARQ7Z5J8 1434 aa23.79■■□□□ 1.4
LMNA-219ENST00000502751 SIN3AQ96ST3 1273 aa23.79■■□□□ 1.4
LMNA-219ENST00000502751 PRR36Q9H6K5 1346 aa23.79■■□□□ 1.4
LMNA-219ENST00000502751 KIF1AQ12756 1690 aa23.78■■□□□ 1.4
LMNA-219ENST00000502751 L3MBTL2Q969R5 705 aa23.77■■□□□ 1.4
LMNA-219ENST00000502751 ADGRB2O60241 1585 aa23.77■■□□□ 1.4
LMNA-219ENST00000502751 TRPC5Q9UL62 973 aaPredicted RBP23.75■■□□□ 1.39
LMNA-219ENST00000502751 SBNO1A3KN83 1393 aa23.75■■□□□ 1.39
LMNA-219ENST00000502751 CDK12Q9NYV4 1490 aaPredicted RBP23.75■■□□□ 1.39
LMNA-219ENST00000502751 USP32Q8NFA0 1604 aa23.74■■□□□ 1.39
LMNA-219ENST00000502751 CABLES1Q8TDN4 633 aa23.73■■□□□ 1.39
LMNA-219ENST00000502751 EIF3AQ14152 1382 aaKnown RBP23.73■■□□□ 1.39
LMNA-219ENST00000502751 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
LMNA-219ENST00000502751 LMOD2Q6P5Q4 547 aa23.72■■□□□ 1.39
LMNA-219ENST00000502751 CDK19Q9BWU1 502 aa23.72■■□□□ 1.39
LMNA-219ENST00000502751 TNS3Q68CZ2 1445 aa23.72■■□□□ 1.39
LMNA-219ENST00000502751 BCL9LQ86UU0 1499 aa23.71■■□□□ 1.39
LMNA-219ENST00000502751 UPF1Q92900 1129 aaKnown RBP eCLIP23.71■■□□□ 1.39
LMNA-219ENST00000502751 NUDT16Q96DE0 195 aaKnown RBP23.71■■□□□ 1.39
LMNA-219ENST00000502751 PLEKHG5O94827 1062 aa23.7■■□□□ 1.38
LMNA-219ENST00000502751 TULP4Q9NRJ4 1543 aa23.69■■□□□ 1.38
LMNA-219ENST00000502751 NGDNQ8NEJ9 315 aaKnown RBP23.69■■□□□ 1.38
LMNA-219ENST00000502751 ATRNO75882 1429 aa23.68■■□□□ 1.38
LMNA-219ENST00000502751 GPRASP1Q5JY77 1395 aa23.68■■□□□ 1.38
LMNA-219ENST00000502751 ARHGEF28Q8N1W1 1705 aaKnown RBP23.68■■□□□ 1.38
LMNA-219ENST00000502751 KIAA1210Q9ULL0 1709 aa23.68■■□□□ 1.38
LMNA-219ENST00000502751 RGS12O14924 1447 aa23.67■■□□□ 1.38
LMNA-219ENST00000502751 ARHGEF10O15013 1369 aa23.67■■□□□ 1.38
LMNA-219ENST00000502751 HAP1P54257 671 aaPredicted RBP23.67■■□□□ 1.38
LMNA-219ENST00000502751 UNC5CLQ8IV45 518 aa23.65■■□□□ 1.38
LMNA-219ENST00000502751 GJD4Q96KN9 370 aaPredicted RBP23.64■■□□□ 1.37
LMNA-219ENST00000502751 PCGF6Q9BYE7 350 aa23.63■■□□□ 1.37
LMNA-219ENST00000502751 CCDC61Q9Y6R9 512 aa23.63■■□□□ 1.37
LMNA-219ENST00000502751 SLIT2O94813 1529 aa23.63■■□□□ 1.37
LMNA-219ENST00000502751 FAM83GA6ND36 823 aa23.62■■□□□ 1.37
LMNA-219ENST00000502751 ATP7BP35670 1465 aa23.62■■□□□ 1.37
LMNA-219ENST00000502751 MARF1Q9Y4F3 1742 aaKnown RBP23.62■■□□□ 1.37
LMNA-219ENST00000502751 CENPJQ9HC77 1338 aaPredicted RBP23.61■■□□□ 1.37
LMNA-219ENST00000502751 PAK3O75914 559 aaPredicted RBP23.61■■□□□ 1.37
LMNA-219ENST00000502751 PLEKHG3A1L390 1219 aa23.6■■□□□ 1.37
LMNA-219ENST00000502751 NBPF8Q3BBV2 869 aa23.59■■□□□ 1.37
LMNA-219ENST00000502751 TRPM3Q9HCF6 1732 aaPredicted RBP23.58■■□□□ 1.37
LMNA-219ENST00000502751 ACEP12821 1306 aa23.58■■□□□ 1.36
LMNA-219ENST00000502751 SRPK2P78362 688 aaKnown RBP23.57■■□□□ 1.36
LMNA-219ENST00000502751 CABP2Q9NPB3 220 aa23.57■■□□□ 1.36
LMNA-219ENST00000502751 POLR3AO14802 1390 aaPredicted RBP23.55■■□□□ 1.36
LMNA-219ENST00000502751 VPS72Q15906 364 aa23.55■■□□□ 1.36
LMNA-219ENST00000502751 RALGAPBQ86X10 1494 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms