RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 NFXL1Q6ZNB6 911 aa13.35□□□□□ -0.27
AC055713.1-201ENST00000498967 SETD5Q9C0A6 1442 aa13.35□□□□□ -0.27
AC055713.1-201ENST00000498967 KINO60870 393 aaKnown RBP13.35□□□□□ -0.27
AC055713.1-201ENST00000498967 DAAM2Q86T65 1068 aa13.35□□□□□ -0.27
AC055713.1-201ENST00000498967 ARHGAP35Q9NRY4 1499 aa13.35□□□□□ -0.27
AC055713.1-201ENST00000498967 CUX2O14529 1486 aa13.35□□□□□ -0.27
AC055713.1-201ENST00000498967 RSPH4AQ5TD94 716 aa13.34□□□□□ -0.27
AC055713.1-201ENST00000498967 NEBLO76041 1014 aa13.34□□□□□ -0.27
AC055713.1-201ENST00000498967 MICALCLQ6ZW33 695 aa13.34□□□□□ -0.27
AC055713.1-201ENST00000498967 DZIP1LQ8IYY4 767 aaKnown RBP13.34□□□□□ -0.27
AC055713.1-201ENST00000498967 RILPL2Q969X0 211 aa13.34□□□□□ -0.27
AC055713.1-201ENST00000498967 SIN3AQ96ST3 1273 aa13.34□□□□□ -0.27
AC055713.1-201ENST00000498967 SLC4A10Q6U841 1118 aa13.34□□□□□ -0.27
AC055713.1-201ENST00000498967 NASPP49321 788 aaPredicted RBP13.34□□□□□ -0.27
AC055713.1-201ENST00000498967 CENPQQ7L2Z9 268 aaPredicted RBP13.34□□□□□ -0.27
AC055713.1-201ENST00000498967 RALYLQ86SE5 291 aaKnown RBP13.34□□□□□ -0.27
AC055713.1-201ENST00000498967 CDK5RAP3Q96JB5 506 aa13.34□□□□□ -0.27
AC055713.1-201ENST00000498967 GBP3Q9H0R5 595 aa13.34□□□□□ -0.27
AC055713.1-201ENST00000498967 BMS1Q14692 1282 aaKnown RBP13.33□□□□□ -0.27
AC055713.1-201ENST00000498967 MAP9Q49MG5 647 aa13.33□□□□□ -0.27
AC055713.1-201ENST00000498967 PDCL3Q9H2J4 239 aa13.33□□□□□ -0.27
AC055713.1-201ENST00000498967 CENPHQ9H3R5 247 aa13.33□□□□□ -0.27
AC055713.1-201ENST00000498967 SMC3Q9UQE7 1217 aa13.33□□□□□ -0.28
AC055713.1-201ENST00000498967 FAM161AQ3B820 660 aa13.33□□□□□ -0.28
AC055713.1-201ENST00000498967 FOXD4L5Q5VV16 416 aaPredicted RBP13.33□□□□□ -0.28
AC055713.1-201ENST00000498967 JMYQ8N9B5 988 aa13.33□□□□□ -0.28
AC055713.1-201ENST00000498967 DCAF11Q8TEB1 546 aa13.33□□□□□ -0.28
AC055713.1-201ENST00000498967 FOXD4L4Q8WXT5 416 aaPredicted RBP13.33□□□□□ -0.28
AC055713.1-201ENST00000498967 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.33□□□□□ -0.28
AC055713.1-201ENST00000498967 MBD3O95983 291 aa13.32□□□□□ -0.28
AC055713.1-201ENST00000498967 SOX12O15370 315 aa13.32□□□□□ -0.28
AC055713.1-201ENST00000498967 SART3Q15020 963 aaKnown RBP13.32□□□□□ -0.28
AC055713.1-201ENST00000498967 DACH1Q9UI36 760 aa13.32□□□□□ -0.28
AC055713.1-201ENST00000498967 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
AC055713.1-201ENST00000498967 ANAPC15P60006 121 aa13.32□□□□□ -0.28
AC055713.1-201ENST00000498967 TERF2IPQ9NYB0 399 aa13.32□□□□□ -0.28
AC055713.1-201ENST00000498967 CARMIL2Q6F5E8 1435 aa13.31□□□□□ -0.28
AC055713.1-201ENST00000498967 C6orf163Q5TEZ5 329 aa13.31□□□□□ -0.28
AC055713.1-201ENST00000498967 JAKMIP3Q5VZ66 844 aa13.31□□□□□ -0.28
AC055713.1-201ENST00000498967 POTEJP0CG39 1038 aa13.31□□□□□ -0.28
AC055713.1-201ENST00000498967 PAK3O75914 559 aaPredicted RBP13.31□□□□□ -0.28
AC055713.1-201ENST00000498967 MRE11P49959 708 aa13.31□□□□□ -0.28
AC055713.1-201ENST00000498967 TRIM5Q9C035 493 aa13.31□□□□□ -0.28
AC055713.1-201ENST00000498967 FMN1Q68DA7 1419 aa13.31□□□□□ -0.28
AC055713.1-201ENST00000498967 SKIDA1Q1XH10 827 aa13.31□□□□□ -0.28
AC055713.1-201ENST00000498967 FOXD4L1Q9NU39 408 aa13.3□□□□□ -0.28
AC055713.1-201ENST00000498967 GIGYF2Q6Y7W6 1299 aaKnown RBP13.3□□□□□ -0.28
AC055713.1-201ENST00000498967 GTPBP4Q9BZE4 634 aaKnown RBP13.3□□□□□ -0.28
AC055713.1-201ENST00000498967 SETSIPP0DME0 302 aa13.3□□□□□ -0.28
AC055713.1-201ENST00000498967 CFAP45Q9UL16 551 aa13.29□□□□□ -0.28
AC055713.1-201ENST00000498967 SMC1AQ14683 1233 aaKnown RBP13.29□□□□□ -0.28
AC055713.1-201ENST00000498967 DDX46Q7L014 1031 aaKnown RBP13.29□□□□□ -0.28
AC055713.1-201ENST00000498967 PPFIBP1Q86W92 1011 aa13.29□□□□□ -0.28
AC055713.1-201ENST00000498967 AEBP2Q6ZN18 517 aaPredicted RBP13.29□□□□□ -0.28
AC055713.1-201ENST00000498967 CRACR2AQ9BSW2 395 aa13.29□□□□□ -0.28
AC055713.1-201ENST00000498967 SENP3-EIF4A1A0A087X0R7 540 aa13.28□□□□□ -0.28
AC055713.1-201ENST00000498967 GCOM1H8Y6P7 765 aaPredicted RBP13.28□□□□□ -0.28
AC055713.1-201ENST00000498967 MYZAPP0CAP1 466 aa13.28□□□□□ -0.28
AC055713.1-201ENST00000498967 PSMA5P28066 241 aa13.28□□□□□ -0.28
AC055713.1-201ENST00000498967 EPB41L2O43491 1005 aaKnown RBP13.28□□□□□ -0.28
AC055713.1-201ENST00000498967 FERP16591 822 aa13.28□□□□□ -0.28
AC055713.1-201ENST00000498967 CCDC6Q16204 474 aa13.28□□□□□ -0.28
AC055713.1-201ENST00000498967 SLC3A2P08195 630 aaKnown RBP13.27□□□□□ -0.28
AC055713.1-201ENST00000498967 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.28
AC055713.1-201ENST00000498967 E9PSI1 815 aa13.27□□□□□ -0.28
AC055713.1-201ENST00000498967 KIF2AO00139 706 aaPredicted RBP13.27□□□□□ -0.28
AC055713.1-201ENST00000498967 ERC2O15083 957 aa13.27□□□□□ -0.28
AC055713.1-201ENST00000498967 SMARCA2P51531 1590 aa13.27□□□□□ -0.29
AC055713.1-201ENST00000498967 IMMTQ16891 758 aaKnown RBP13.27□□□□□ -0.29
AC055713.1-201ENST00000498967 CALCOCO1Q9P1Z2 691 aa13.27□□□□□ -0.29
AC055713.1-201ENST00000498967 CCDC9Q9Y3X0 531 aaKnown RBP13.27□□□□□ -0.29
AC055713.1-201ENST00000498967 EIF4G1Q04637 1599 aaKnown RBP13.27□□□□□ -0.29
AC055713.1-201ENST00000498967 VPS37CA5D8V6 355 aaPredicted RBP13.27□□□□□ -0.29
AC055713.1-201ENST00000498967 KIF3CO14782 793 aa13.27□□□□□ -0.29
AC055713.1-201ENST00000498967 ANO2Q9NQ90 1003 aa13.27□□□□□ -0.29
AC055713.1-201ENST00000498967 C9orf78Q9NZ63 289 aaPredicted RBP13.26□□□□□ -0.29
AC055713.1-201ENST00000498967 SMC2O95347 1197 aa13.26□□□□□ -0.29
AC055713.1-201ENST00000498967 TMCO3Q6UWJ1 677 aa13.26□□□□□ -0.29
AC055713.1-201ENST00000498967 RRP9O43818 475 aaKnown RBP13.26□□□□□ -0.29
AC055713.1-201ENST00000498967 MCM2P49736 904 aa13.26□□□□□ -0.29
AC055713.1-201ENST00000498967 FOXD4L6Q3SYB3 417 aaPredicted RBP13.26□□□□□ -0.29
AC055713.1-201ENST00000498967 FOXD4L3Q6VB84 417 aaPredicted RBP13.26□□□□□ -0.29
AC055713.1-201ENST00000498967 HOOK3Q86VS8 718 aa13.26□□□□□ -0.29
AC055713.1-201ENST00000498967 SREK1Q8WXA9 508 aaKnown RBP13.26□□□□□ -0.29
AC055713.1-201ENST00000498967 PDIA4P13667 645 aaKnown RBP13.26□□□□□ -0.29
AC055713.1-201ENST00000498967 LRRFIP2Q9Y608 721 aaKnown RBP13.25□□□□□ -0.29
AC055713.1-201ENST00000498967 DDX58O95786 925 aaKnown RBP13.25□□□□□ -0.29
AC055713.1-201ENST00000498967 IFIT2P09913 472 aaKnown RBP13.25□□□□□ -0.29
AC055713.1-201ENST00000498967 CBFA2T2O43439 604 aa13.25□□□□□ -0.29
AC055713.1-201ENST00000498967 KRT18P05783 430 aaKnown RBP13.25□□□□□ -0.29
AC055713.1-201ENST00000498967 SOGA3Q5TF21 947 aa13.25□□□□□ -0.29
AC055713.1-201ENST00000498967 SPECC1LQ69YQ0 1117 aa13.25□□□□□ -0.29
AC055713.1-201ENST00000498967 DDX12PQ92771 950 aa13.25□□□□□ -0.29
AC055713.1-201ENST00000498967 INTS3Q68E01 1043 aaKnown RBP13.24□□□□□ -0.29
AC055713.1-201ENST00000498967 TAOK3Q9H2K8 898 aa13.24□□□□□ -0.29
AC055713.1-201ENST00000498967 ERC1Q8IUD2 1116 aa13.24□□□□□ -0.29
AC055713.1-201ENST00000498967 WDR66Q8TBY9 1149 aa13.24□□□□□ -0.29
AC055713.1-201ENST00000498967 AAMPQ13685 434 aa13.24□□□□□ -0.29
AC055713.1-201ENST00000498967 ANKRD45Q5TZF3 282 aa13.24□□□□□ -0.29
AC055713.1-201ENST00000498967 TIGD1Q96MW7 591 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms