RNA–Protein interactions for RNA: ENST00000497565.1

BRPF1-208, Transcript of bromodomain and PHD finger containing 1, humanhuman

TSL 3

Gene BRPF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-208ENST00000497565 YTHDC2Q9H6S0 1430 aaKnown RBP19.05■□□□□ 0.64
BRPF1-208ENST00000497565 CDC42BPGQ6DT37 1551 aa19.03■□□□□ 0.64
BRPF1-208ENST00000497565 POTEAQ6S8J7 498 aa19.03■□□□□ 0.64
BRPF1-208ENST00000497565 LAMC1P11047 1609 aa19.03■□□□□ 0.64
BRPF1-208ENST00000497565 SOS2Q07890 1332 aaPredicted RBP19.02■□□□□ 0.64
BRPF1-208ENST00000497565 CFAP70Q5T0N1 1121 aa19.02■□□□□ 0.64
BRPF1-208ENST00000497565 WAPLQ7Z5K2 1190 aa19.02■□□□□ 0.64
BRPF1-208ENST00000497565 ORAI2Q96SN7 254 aa19.02■□□□□ 0.64
BRPF1-208ENST00000497565 KNDC1Q76NI1 1749 aa19.02■□□□□ 0.63
BRPF1-208ENST00000497565 NPHP3Q7Z494 1330 aa19■□□□□ 0.63
BRPF1-208ENST00000497565 ESCO1Q5FWF5 840 aa19■□□□□ 0.63
BRPF1-208ENST00000497565 DCAF11Q8TEB1 546 aa18.99■□□□□ 0.63
BRPF1-208ENST00000497565 LRP6O75581 1613 aa18.99■□□□□ 0.63
BRPF1-208ENST00000497565 PNPLA6Q8IY17 1366 aa18.98■□□□□ 0.63
BRPF1-208ENST00000497565 NUTM2BA6NNL0 878 aaPredicted RBP18.98■□□□□ 0.63
BRPF1-208ENST00000497565 NUTM2EB1AL46 878 aaPredicted RBP18.98■□□□□ 0.63
BRPF1-208ENST00000497565 NUTM2AQ8IVF1 878 aaPredicted RBP18.98■□□□□ 0.63
BRPF1-208ENST00000497565 DDX17Q92841 729 aaKnown RBP18.97■□□□□ 0.63
BRPF1-208ENST00000497565 KDM2AQ9Y2K7 1162 aa18.95■□□□□ 0.62
BRPF1-208ENST00000497565 DLC1Q96QB1 1528 aa18.95■□□□□ 0.62
BRPF1-208ENST00000497565 PLEKHH1Q9ULM0 1364 aa18.94■□□□□ 0.62
BRPF1-208ENST00000497565 POGKQ9P215 609 aa18.94■□□□□ 0.62
BRPF1-208ENST00000497565 FOXO3O43524 673 aa18.93■□□□□ 0.62
BRPF1-208ENST00000497565 PRAM1Q96QH2 718 aa18.93■□□□□ 0.62
BRPF1-208ENST00000497565 RXRBP28702 533 aa18.91■□□□□ 0.62
BRPF1-208ENST00000497565 AFF2P51816 1311 aa18.91■□□□□ 0.62
BRPF1-208ENST00000497565 PSME1Q06323 249 aa18.89■□□□□ 0.61
BRPF1-208ENST00000497565 C8orf37Q96NL8 207 aa18.89■□□□□ 0.61
BRPF1-208ENST00000497565 EIF3AQ14152 1382 aaKnown RBP18.89■□□□□ 0.61
BRPF1-208ENST00000497565 ADGRB1O14514 1584 aa18.89■□□□□ 0.61
BRPF1-208ENST00000497565 NUTM2FA1L443 756 aa18.88■□□□□ 0.61
BRPF1-208ENST00000497565 NGLY1Q96IV0 654 aa18.88■□□□□ 0.61
BRPF1-208ENST00000497565 TRAK1Q9UPV9 953 aa18.88■□□□□ 0.61
BRPF1-208ENST00000497565 PXDNQ92626 1479 aa18.88■□□□□ 0.61
BRPF1-208ENST00000497565 FMN2Q9NZ56 1722 aa18.88■□□□□ 0.61
BRPF1-208ENST00000497565 PHF8Q9UPP1 1060 aa18.87■□□□□ 0.61
BRPF1-208ENST00000497565 KIF1AQ12756 1690 aa18.86■□□□□ 0.61
BRPF1-208ENST00000497565 ANKARQ7Z5J8 1434 aa18.86■□□□□ 0.61
BRPF1-208ENST00000497565 CDK12Q9NYV4 1490 aaPredicted RBP18.85■□□□□ 0.61
BRPF1-208ENST00000497565 ADAMTS2O95450 1211 aa18.85■□□□□ 0.61
BRPF1-208ENST00000497565 SAFB2Q14151 953 aaKnown RBP eCLIP18.85■□□□□ 0.61
BRPF1-208ENST00000497565 KRT28Q7Z3Y7 464 aa18.85■□□□□ 0.61
BRPF1-208ENST00000497565 QTRT2Q9H974 415 aaKnown RBP18.85■□□□□ 0.61
BRPF1-208ENST00000497565 COL22A1Q8NFW1 1626 aaPredicted RBP18.85■□□□□ 0.61
BRPF1-208ENST00000497565 SPATA31A3Q5VYP0 1347 aa18.84■□□□□ 0.61
BRPF1-208ENST00000497565 RBM6P78332 1123 aaKnown RBP18.84■□□□□ 0.61
BRPF1-208ENST00000497565 FNBP4Q8N3X1 1017 aaPredicted RBP18.84■□□□□ 0.61
BRPF1-208ENST00000497565 ADGRB2O60241 1585 aa18.82■□□□□ 0.6
BRPF1-208ENST00000497565 XPCQ01831 940 aaPredicted RBP18.82■□□□□ 0.6
BRPF1-208ENST00000497565 SBNO1A3KN83 1393 aa18.81■□□□□ 0.6
BRPF1-208ENST00000497565 WASLO00401 505 aaPredicted RBP18.81■□□□□ 0.6
BRPF1-208ENST00000497565 USP21Q9UK80 565 aa18.81■□□□□ 0.6
BRPF1-208ENST00000497565 TRPC5Q9UL62 973 aaPredicted RBP18.81■□□□□ 0.6
BRPF1-208ENST00000497565 MINK1Q8N4C8 1332 aaPredicted RBP18.79■□□□□ 0.6
BRPF1-208ENST00000497565 ARHGEF10O15013 1369 aa18.79■□□□□ 0.6
BRPF1-208ENST00000497565 KIAA1210Q9ULL0 1709 aa18.78■□□□□ 0.6
BRPF1-208ENST00000497565 HIRIP3Q9BW71 556 aaPredicted RBP18.77■□□□□ 0.6
BRPF1-208ENST00000497565 GPRASP1Q5JY77 1395 aa18.77■□□□□ 0.6
BRPF1-208ENST00000497565 TNS3Q68CZ2 1445 aa18.76■□□□□ 0.59
BRPF1-208ENST00000497565 TULP4Q9NRJ4 1543 aa18.75■□□□□ 0.59
BRPF1-208ENST00000497565 RGPD8O14715 1765 aaPredicted RBP18.75■□□□□ 0.59
BRPF1-208ENST00000497565 HAP1P54257 671 aaPredicted RBP18.74■□□□□ 0.59
BRPF1-208ENST00000497565 PMFBP1Q8TBY8 1022 aa18.74■□□□□ 0.59
BRPF1-208ENST00000497565 NGDNQ8NEJ9 315 aaKnown RBP18.72■□□□□ 0.59
BRPF1-208ENST00000497565 L3MBTL2Q969R5 705 aa18.72■□□□□ 0.59
BRPF1-208ENST00000497565 ATRNO75882 1429 aa18.72■□□□□ 0.59
BRPF1-208ENST00000497565 LMOD2Q6P5Q4 547 aa18.71■□□□□ 0.59
BRPF1-208ENST00000497565 UNC5CLQ8IV45 518 aa18.71■□□□□ 0.59
BRPF1-208ENST00000497565 UPF1Q92900 1129 aaKnown RBP eCLIP18.71■□□□□ 0.59
BRPF1-208ENST00000497565 NUDT16Q96DE0 195 aaKnown RBP18.71■□□□□ 0.59
BRPF1-208ENST00000497565 ARHGEF28Q8N1W1 1705 aaKnown RBP18.71■□□□□ 0.59
BRPF1-208ENST00000497565 PRR36Q9H6K5 1346 aa18.71■□□□□ 0.59
BRPF1-208ENST00000497565 USP32Q8NFA0 1604 aa18.71■□□□□ 0.58
BRPF1-208ENST00000497565 NBPF1Q3BBV0 1214 aa18.7■□□□□ 0.58
BRPF1-208ENST00000497565 CDK19Q9BWU1 502 aa18.7■□□□□ 0.58
BRPF1-208ENST00000497565 MARF1Q9Y4F3 1742 aaKnown RBP18.7■□□□□ 0.58
BRPF1-208ENST00000497565 CCDC61Q9Y6R9 512 aa18.7■□□□□ 0.58
BRPF1-208ENST00000497565 BCL9LQ86UU0 1499 aa18.7■□□□□ 0.58
BRPF1-208ENST00000497565 GJD4Q96KN9 370 aaPredicted RBP18.68■□□□□ 0.58
BRPF1-208ENST00000497565 CENPJQ9HC77 1338 aaPredicted RBP18.68■□□□□ 0.58
BRPF1-208ENST00000497565 RGS12O14924 1447 aa18.67■□□□□ 0.58
BRPF1-208ENST00000497565 SLIT2O94813 1529 aa18.67■□□□□ 0.58
BRPF1-208ENST00000497565 PLEKHG3A1L390 1219 aa18.66■□□□□ 0.58
BRPF1-208ENST00000497565 SIN3AQ96ST3 1273 aa18.66■□□□□ 0.58
BRPF1-208ENST00000497565 NEUROD1Q13562 356 aa18.65■□□□□ 0.58
BRPF1-208ENST00000497565 ITSN1Q15811 1721 aa18.65■□□□□ 0.58
BRPF1-208ENST00000497565 ATP7BP35670 1465 aa18.65■□□□□ 0.58
BRPF1-208ENST00000497565 CABLES1Q8TDN4 633 aa18.64■□□□□ 0.57
BRPF1-208ENST00000497565 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.57
BRPF1-208ENST00000497565 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.63■□□□□ 0.57
BRPF1-208ENST00000497565 PAK3O75914 559 aaPredicted RBP18.63■□□□□ 0.57
BRPF1-208ENST00000497565 TRIM26Q12899 539 aaPredicted RBP18.63■□□□□ 0.57
BRPF1-208ENST00000497565 VPS72Q15906 364 aa18.63■□□□□ 0.57
BRPF1-208ENST00000497565 POLR3AO14802 1390 aaPredicted RBP18.63■□□□□ 0.57
BRPF1-208ENST00000497565 NBPF8Q3BBV2 869 aa18.62■□□□□ 0.57
BRPF1-208ENST00000497565 TRPM3Q9HCF6 1732 aaPredicted RBP18.62■□□□□ 0.57
BRPF1-208ENST00000497565 BRD4O60885 1362 aaPredicted RBP18.61■□□□□ 0.57
BRPF1-208ENST00000497565 FAM83GA6ND36 823 aa18.61■□□□□ 0.57
BRPF1-208ENST00000497565 SRPK2P78362 688 aaKnown RBP18.61■□□□□ 0.57
BRPF1-208ENST00000497565 ACEP12821 1306 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 203.7 ms