RNA–Protein interactions for RNA: ENST00000497559.1

TNRC6B-209, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 5

Gene TNRC6B, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-209ENST00000497559 AAASQ9NRG9 546 aa13.45□□□□□ -0.26
TNRC6B-209ENST00000497559 TOR4AQ9NXH8 423 aa13.45□□□□□ -0.26
TNRC6B-209ENST00000497559 ST8SIA5O15466 376 aa13.44□□□□□ -0.26
TNRC6B-209ENST00000497559 MMP16P51512 607 aa13.42□□□□□ -0.26
TNRC6B-209ENST00000497559 CYP4X1Q8N118 509 aa13.42□□□□□ -0.26
TNRC6B-209ENST00000497559 CCDC102AQ96A19 550 aa13.41□□□□□ -0.26
TNRC6B-209ENST00000497559 USP46P62068 366 aa13.4□□□□□ -0.26
TNRC6B-209ENST00000497559 USB1Q9BQ65 265 aaKnown RBP13.4□□□□□ -0.26
TNRC6B-209ENST00000497559 HLA-CQ95604 372 aa13.39□□□□□ -0.27
TNRC6B-209ENST00000497559 CRIPAKQ8N1N5 446 aa13.38□□□□□ -0.27
TNRC6B-209ENST00000497559 AVPP01185 164 aa13.37□□□□□ -0.27
TNRC6B-209ENST00000497559 DXOO77932 396 aaKnown RBP13.36□□□□□ -0.27
TNRC6B-209ENST00000497559 GPCPD1Q9NPB8 672 aa13.36□□□□□ -0.27
TNRC6B-209ENST00000497559 HOXA2O43364 376 aa13.35□□□□□ -0.27
TNRC6B-209ENST00000497559 TRIM32Q13049 653 aa13.35□□□□□ -0.27
TNRC6B-209ENST00000497559 TTC24A2A3L6 582 aaPredicted RBP13.34□□□□□ -0.27
TNRC6B-209ENST00000497559 WNT7AO00755 349 aa13.34□□□□□ -0.27
TNRC6B-209ENST00000497559 CLCN1P35523 988 aa13.34□□□□□ -0.27
TNRC6B-209ENST00000497559 FAM217BQ9NTX9 383 aaPredicted RBP13.33□□□□□ -0.28
TNRC6B-209ENST00000497559 DACH1Q9UI36 760 aa13.33□□□□□ -0.28
TNRC6B-209ENST00000497559 AXIN1O15169 862 aa13.31□□□□□ -0.28
TNRC6B-209ENST00000497559 GUCA2AQ02747 115 aa13.31□□□□□ -0.28
TNRC6B-209ENST00000497559 CTC1Q2NKJ3 1217 aa13.31□□□□□ -0.28
TNRC6B-209ENST00000497559 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.31□□□□□ -0.28
TNRC6B-209ENST00000497559 CCDC24Q8N4L8 307 aa13.3□□□□□ -0.28
TNRC6B-209ENST00000497559 KRI1Q8N9T8 703 aaKnown RBP13.3□□□□□ -0.28
TNRC6B-209ENST00000497559 SNIP1Q8TAD8 396 aaKnown RBP13.3□□□□□ -0.28
TNRC6B-209ENST00000497559 SMCPP49901 116 aaPredicted RBP13.28□□□□□ -0.28
TNRC6B-209ENST00000497559 NUTM1Q86Y26 1132 aa13.28□□□□□ -0.28
TNRC6B-209ENST00000497559 MRGPRX2Q96LB1 330 aa13.28□□□□□ -0.28
TNRC6B-209ENST00000497559 SMPD1P17405 629 aa13.27□□□□□ -0.29
TNRC6B-209ENST00000497559 SYMPKQ92797 1274 aaKnown RBP13.27□□□□□ -0.29
TNRC6B-209ENST00000497559 JUNDP17535 347 aa13.25□□□□□ -0.29
TNRC6B-209ENST00000497559 REPIN1Q9BWE0 567 aaKnown RBP13.25□□□□□ -0.29
TNRC6B-209ENST00000497559 GMPR2Q9P2T1 348 aaKnown RBP13.25□□□□□ -0.29
TNRC6B-209ENST00000497559 J3QL48 77 aa13.23□□□□□ -0.29
TNRC6B-209ENST00000497559 C11orf95C9JLR9 678 aaPredicted RBP13.21□□□□□ -0.29
TNRC6B-209ENST00000497559 WNT7BP56706 349 aa13.21□□□□□ -0.29
TNRC6B-209ENST00000497559 SKOR1P84550 965 aa13.21□□□□□ -0.29
TNRC6B-209ENST00000497559 RC3H1Q5TC82 1133 aaKnown RBP13.21□□□□□ -0.29
TNRC6B-209ENST00000497559 TREML4Q6UXN2 200 aa13.21□□□□□ -0.29
TNRC6B-209ENST00000497559 RETREG3Q86VR2 466 aa13.21□□□□□ -0.29
TNRC6B-209ENST00000497559 FDX1P10109 184 aa13.2□□□□□ -0.3
TNRC6B-209ENST00000497559 SSTR3P32745 418 aaPredicted RBP13.2□□□□□ -0.3
TNRC6B-209ENST00000497559 PCDHGC3Q9UN70 934 aa13.19□□□□□ -0.3
TNRC6B-209ENST00000497559 BARGINQ6ZT62 677 aa13.18□□□□□ -0.3
TNRC6B-209ENST00000497559 LCE2AQ5TA79 106 aaPredicted RBP13.17□□□□□ -0.3
TNRC6B-209ENST00000497559 NUDT12Q9BQG2 462 aa13.17□□□□□ -0.3
TNRC6B-209ENST00000497559 C6orf229H3BNL8 230 aa13.16□□□□□ -0.3
TNRC6B-209ENST00000497559 PTCRAQ6ISU1 281 aaPredicted RBP13.16□□□□□ -0.3
TNRC6B-209ENST00000497559 SPIRE2Q8WWL2 714 aa13.16□□□□□ -0.3
TNRC6B-209ENST00000497559 HPS1Q92902 700 aa13.16□□□□□ -0.3
TNRC6B-209ENST00000497559 ZMYND10O75800 440 aa13.15□□□□□ -0.3
TNRC6B-209ENST00000497559 ATP13A2Q9NQ11 1180 aa13.15□□□□□ -0.3
TNRC6B-209ENST00000497559 TTLL12Q14166 644 aaPredicted RBP13.14□□□□□ -0.31
TNRC6B-209ENST00000497559 NDUFV2P19404 249 aa13.12□□□□□ -0.31
TNRC6B-209ENST00000497559 MS4A1P11836 297 aa13.11□□□□□ -0.31
TNRC6B-209ENST00000497559 AMHR2Q16671 573 aa13.11□□□□□ -0.31
TNRC6B-209ENST00000497559 MOXD2PA6NHM9 499 aa13.1□□□□□ -0.31
TNRC6B-209ENST00000497559 ALDH1A1P00352 501 aa13.1□□□□□ -0.31
TNRC6B-209ENST00000497559 ZC3H15Q8WU90 426 aaKnown RBP13.1□□□□□ -0.31
TNRC6B-209ENST00000497559 CCNYL3P0C7X3 344 aa13.09□□□□□ -0.31
TNRC6B-209ENST00000497559 SIAH2O43255 324 aa13.08□□□□□ -0.32
TNRC6B-209ENST00000497559 WFS1O76024 890 aa13.08□□□□□ -0.32
TNRC6B-209ENST00000497559 GIGYF2Q6Y7W6 1299 aaKnown RBP13.08□□□□□ -0.32
TNRC6B-209ENST00000497559 EHBP1Q8NDI1 1231 aa13.08□□□□□ -0.32
TNRC6B-209ENST00000497559 SNRPBP14678 240 aaKnown RBP13.07□□□□□ -0.32
TNRC6B-209ENST00000497559 PTPRNQ16849 979 aa13.07□□□□□ -0.32
TNRC6B-209ENST00000497559 TRIM47Q96LD4 638 aa13.07□□□□□ -0.32
TNRC6B-209ENST00000497559 SENP2Q9HC62 589 aa13.07□□□□□ -0.32
TNRC6B-209ENST00000497559 SH3BP2P78314 561 aa13.05□□□□□ -0.32
TNRC6B-209ENST00000497559 PRR7Q8TB68 274 aa13.05□□□□□ -0.32
TNRC6B-209ENST00000497559 BEGAINQ9BUH8 593 aa13.05□□□□□ -0.32
TNRC6B-209ENST00000497559 EVA1BQ9NVM1 165 aa13.05□□□□□ -0.32
TNRC6B-209ENST00000497559 NFX1Q12986 1120 aaKnown RBP13.04□□□□□ -0.32
TNRC6B-209ENST00000497559 MTMR2Q13614 643 aa13.04□□□□□ -0.32
TNRC6B-209ENST00000497559 SPDYE5A6NIY4 337 aa13.03□□□□□ -0.32
TNRC6B-209ENST00000497559 UNC93B1Q9H1C4 597 aa13.03□□□□□ -0.32
TNRC6B-209ENST00000497559 KCNH2Q12809 1159 aa13.02□□□□□ -0.33
TNRC6B-209ENST00000497559 DESI1Q6ICB0 168 aa13.01□□□□□ -0.33
TNRC6B-209ENST00000497559 KIFC2Q96AC6 838 aa13.01□□□□□ -0.33
TNRC6B-209ENST00000497559 WASF2Q9Y6W5 498 aa13.01□□□□□ -0.33
TNRC6B-209ENST00000497559 BAP1Q92560 729 aa13□□□□□ -0.33
TNRC6B-209ENST00000497559 TBC1D2Q9BYX2 928 aa13□□□□□ -0.33
TNRC6B-209ENST00000497559 GJA5P36382 358 aa12.99□□□□□ -0.33
TNRC6B-209ENST00000497559 LINC01559Q495D7 138 aa12.99□□□□□ -0.33
TNRC6B-209ENST00000497559 DIXDC1Q155Q3 683 aa12.98□□□□□ -0.33
TNRC6B-209ENST00000497559 RSBN1LQ6PCB5 846 aaPredicted RBP12.98□□□□□ -0.33
TNRC6B-209ENST00000497559 PARP9Q8IXQ6 854 aa12.98□□□□□ -0.33
TNRC6B-209ENST00000497559 TERTO14746 1132 aaKnown RBP12.97□□□□□ -0.33
TNRC6B-209ENST00000497559 TRIM66O15016 1216 aa12.96□□□□□ -0.33
TNRC6B-209ENST00000497559 CAPN5O15484 640 aaPredicted RBP12.95□□□□□ -0.34
TNRC6B-209ENST00000497559 ZNF511Q8NB15 262 aa12.95□□□□□ -0.34
TNRC6B-209ENST00000497559 PCDHB15Q9Y5E8 787 aa12.95□□□□□ -0.34
TNRC6B-209ENST00000497559 SPTLC1O15269 473 aa12.93□□□□□ -0.34
TNRC6B-209ENST00000497559 LYPD8Q6UX82 237 aa12.93□□□□□ -0.34
TNRC6B-209ENST00000497559 WIPF1O43516 503 aa12.92□□□□□ -0.34
TNRC6B-209ENST00000497559 BMP1P13497 986 aa12.92□□□□□ -0.34
TNRC6B-209ENST00000497559 VARSP26640 1264 aaKnown RBP12.92□□□□□ -0.34
TNRC6B-209ENST00000497559 TRIM46Q7Z4K8 759 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms