RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 TDRD9Q8NDG6 1382 aaKnown RBP7.61□□□□□ -1.19
CMSS1-209ENST00000497345 NRG2O14511 850 aaPredicted RBP7.61□□□□□ -1.19
CMSS1-209ENST00000497345 PPEF1O14829 653 aaPredicted RBP7.61□□□□□ -1.19
CMSS1-209ENST00000497345 S1PR4O95977 384 aa7.61□□□□□ -1.19
CMSS1-209ENST00000497345 ANKLE1Q8NAG6 615 aa7.61□□□□□ -1.19
CMSS1-209ENST00000497345 SLC19A1P41440 591 aa7.6□□□□□ -1.19
CMSS1-209ENST00000497345 GCGRP47871 477 aa7.6□□□□□ -1.19
CMSS1-209ENST00000497345 SULF1Q8IWU6 871 aa7.6□□□□□ -1.19
CMSS1-209ENST00000497345 EEA1Q15075 1411 aa7.6□□□□□ -1.19
CMSS1-209ENST00000497345 FUT2Q10981 343 aa7.59□□□□□ -1.19
CMSS1-209ENST00000497345 EMID1Q96A84 441 aaPredicted RBP7.59□□□□□ -1.19
CMSS1-209ENST00000497345 SPSB2Q99619 263 aa7.59□□□□□ -1.19
CMSS1-209ENST00000497345 SLC6A16Q9GZN6 736 aa7.59□□□□□ -1.19
CMSS1-209ENST00000497345 PDZRN3Q9UPQ7 1066 aa7.59□□□□□ -1.19
CMSS1-209ENST00000497345 IRF6O14896 467 aa7.58□□□□□ -1.2
CMSS1-209ENST00000497345 ATP6V1AP38606 617 aa7.58□□□□□ -1.2
CMSS1-209ENST00000497345 MAP2K5Q13163 448 aa7.58□□□□□ -1.2
CMSS1-209ENST00000497345 MORN1Q5T089 497 aa7.58□□□□□ -1.2
CMSS1-209ENST00000497345 TRAF7Q6Q0C0 670 aa7.58□□□□□ -1.2
CMSS1-209ENST00000497345 RAPGEF2Q9Y4G8 1499 aa7.56□□□□□ -1.2
CMSS1-209ENST00000497345 MINK1Q8N4C8 1332 aaPredicted RBP7.56□□□□□ -1.2
CMSS1-209ENST00000497345 THOC2Q8NI27 1593 aaKnown RBP7.56□□□□□ -1.2
CMSS1-209ENST00000497345 LCE2BO14633 110 aa7.56□□□□□ -1.2
CMSS1-209ENST00000497345 SPRYD7Q5W111 196 aa7.56□□□□□ -1.2
CMSS1-209ENST00000497345 LIAT1Q6ZQX7 453 aa7.56□□□□□ -1.2
CMSS1-209ENST00000497345 ZNF598Q86UK7 904 aaKnown RBP7.56□□□□□ -1.2
CMSS1-209ENST00000497345 WDR62O43379 1518 aa7.56□□□□□ -1.2
CMSS1-209ENST00000497345 AQRO60306 1485 aaKnown RBP eCLIP7.55□□□□□ -1.2
CMSS1-209ENST00000497345 GOLGA3Q08378 1498 aa7.55□□□□□ -1.2
CMSS1-209ENST00000497345 THAP11Q96EK4 314 aa7.55□□□□□ -1.2
CMSS1-209ENST00000497345 SLC27A5Q9Y2P5 690 aa7.55□□□□□ -1.2
CMSS1-209ENST00000497345 ABCA10Q8WWZ4 1543 aa7.55□□□□□ -1.2
CMSS1-209ENST00000497345 IGF1RP08069 1367 aa7.55□□□□□ -1.2
CMSS1-209ENST00000497345 ZNF608Q9ULD9 1512 aaPredicted RBP7.54□□□□□ -1.2
CMSS1-209ENST00000497345 FMNL1O95466 1100 aaPredicted RBP7.54□□□□□ -1.2
CMSS1-209ENST00000497345 TRIM67Q6ZTA4 783 aa7.54□□□□□ -1.2
CMSS1-209ENST00000497345 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.54□□□□□ -1.2
CMSS1-209ENST00000497345 TARBP1Q13395 1621 aaKnown RBP7.53□□□□□ -1.2
CMSS1-209ENST00000497345 CD46P15529 392 aa7.53□□□□□ -1.2
CMSS1-209ENST00000497345 GRIPAP1Q4V328 841 aa7.53□□□□□ -1.2
CMSS1-209ENST00000497345 PPARGC1BQ86YN6 1023 aaKnown RBP7.53□□□□□ -1.2
CMSS1-209ENST00000497345 SALL2Q9Y467 1007 aaPredicted RBP7.53□□□□□ -1.2
CMSS1-209ENST00000497345 CARMIL1Q5VZK9 1371 aa7.53□□□□□ -1.2
CMSS1-209ENST00000497345 GAPVD1Q14C86 1478 aa7.53□□□□□ -1.2
CMSS1-209ENST00000497345 WDR97A6NE52 1622 aa7.52□□□□□ -1.2
CMSS1-209ENST00000497345 KIF21BO75037 1637 aa7.52□□□□□ -1.2
CMSS1-209ENST00000497345 IFT140Q96RY7 1462 aa7.52□□□□□ -1.21
CMSS1-209ENST00000497345 PLA2G2CQ5R387 149 aa7.52□□□□□ -1.21
CMSS1-209ENST00000497345 BRICD5Q6PL45 260 aa7.52□□□□□ -1.21
CMSS1-209ENST00000497345 FAM160A2Q8N612 972 aaPredicted RBP7.52□□□□□ -1.21
CMSS1-209ENST00000497345 TTBK1Q5TCY1 1321 aaPredicted RBP7.52□□□□□ -1.21
CMSS1-209ENST00000497345 TNIKQ9UKE5 1360 aa7.51□□□□□ -1.21
CMSS1-209ENST00000497345 PRR20EP86478 221 aa7.51□□□□□ -1.21
CMSS1-209ENST00000497345 PRR20CP86479 221 aa7.51□□□□□ -1.21
CMSS1-209ENST00000497345 PRR20DP86480 221 aa7.51□□□□□ -1.21
CMSS1-209ENST00000497345 PRR20BP86481 221 aa7.51□□□□□ -1.21
CMSS1-209ENST00000497345 PRR20AP86496 221 aa7.51□□□□□ -1.21
CMSS1-209ENST00000497345 MDM2Q00987 491 aaPredicted RBP7.51□□□□□ -1.21
CMSS1-209ENST00000497345 ZNF697Q5TEC3 545 aa7.51□□□□□ -1.21
CMSS1-209ENST00000497345 PRXQ9BXM0 1461 aa7.5□□□□□ -1.21
CMSS1-209ENST00000497345 CCDC102AQ96A19 550 aa7.5□□□□□ -1.21
CMSS1-209ENST00000497345 CEP162Q5TB80 1403 aa7.5□□□□□ -1.21
CMSS1-209ENST00000497345 ABCA5Q8WWZ7 1642 aa7.49□□□□□ -1.21
CMSS1-209ENST00000497345 PBRM1Q86U86 1689 aa7.49□□□□□ -1.21
CMSS1-209ENST00000497345 GDF9O60383 454 aa7.49□□□□□ -1.21
CMSS1-209ENST00000497345 KDM4AO75164 1064 aa7.48□□□□□ -1.21
CMSS1-209ENST00000497345 RNF19BQ6ZMZ0 732 aa7.48□□□□□ -1.21
CMSS1-209ENST00000497345 FCF1Q9Y324 198 aaKnown RBP7.48□□□□□ -1.21
CMSS1-209ENST00000497345 EIF4G3O43432 1585 aaKnown RBP7.47□□□□□ -1.21
CMSS1-209ENST00000497345 CLCN1P35523 988 aa7.47□□□□□ -1.21
CMSS1-209ENST00000497345 RPIAP49247 311 aa7.47□□□□□ -1.21
CMSS1-209ENST00000497345 Q3C1V9 767 aa7.47□□□□□ -1.21
CMSS1-209ENST00000497345 MSS51Q4VC12 460 aa7.47□□□□□ -1.21
CMSS1-209ENST00000497345 LMOD2Q6P5Q4 547 aa7.47□□□□□ -1.21
CMSS1-209ENST00000497345 GPCPD1Q9NPB8 672 aa7.47□□□□□ -1.21
CMSS1-209ENST00000497345 ERICH3Q5RHP9 1530 aa7.47□□□□□ -1.21
CMSS1-209ENST00000497345 CLIP1P30622 1438 aa7.46□□□□□ -1.21
CMSS1-209ENST00000497345 TNFRSF10AO00220 468 aa7.46□□□□□ -1.22
CMSS1-209ENST00000497345 DGAT1O75907 488 aa7.46□□□□□ -1.22
CMSS1-209ENST00000497345 CD2BP2O95400 341 aaKnown RBP7.46□□□□□ -1.22
CMSS1-209ENST00000497345 KRI1Q8N9T8 703 aaKnown RBP7.46□□□□□ -1.22
CMSS1-209ENST00000497345 PRDM9Q9NQV7 894 aa7.46□□□□□ -1.22
CMSS1-209ENST00000497345 GRIN2BQ13224 1484 aa7.46□□□□□ -1.22
CMSS1-209ENST00000497345 SNAPC4Q5SXM2 1469 aa7.46□□□□□ -1.22
CMSS1-209ENST00000497345 CUL7Q14999 1698 aa7.45□□□□□ -1.22
CMSS1-209ENST00000497345 USP46P62068 366 aa7.45□□□□□ -1.22
CMSS1-209ENST00000497345 PKDCCQ504Y2 493 aa7.45□□□□□ -1.22
CMSS1-209ENST00000497345 CHMP7Q8WUX9 453 aaPredicted RBP7.45□□□□□ -1.22
CMSS1-209ENST00000497345 FAM217BQ9NTX9 383 aaPredicted RBP7.45□□□□□ -1.22
CMSS1-209ENST00000497345 FOXC1Q12948 553 aa7.44□□□□□ -1.22
CMSS1-209ENST00000497345 BARGINQ6ZT62 677 aa7.44□□□□□ -1.22
CMSS1-209ENST00000497345 PKD2L1Q9P0L9 805 aa7.44□□□□□ -1.22
CMSS1-209ENST00000497345 ATP1B4Q9UN42 357 aaPredicted RBP7.44□□□□□ -1.22
CMSS1-209ENST00000497345 ZBTB24O43167 697 aaPredicted RBP7.43□□□□□ -1.22
CMSS1-209ENST00000497345 ZMYND10O75800 440 aa7.43□□□□□ -1.22
CMSS1-209ENST00000497345 MYT1Q01538 1121 aa7.43□□□□□ -1.22
CMSS1-209ENST00000497345 HLA-CQ95604 372 aa7.43□□□□□ -1.22
CMSS1-209ENST00000497345 USB1Q9BQ65 265 aaKnown RBP7.43□□□□□ -1.22
CMSS1-209ENST00000497345 FHAD1B1AJZ9 1412 aa7.43□□□□□ -1.22
CMSS1-209ENST00000497345 ADAMTS12P58397 1594 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms