RNA–Protein interactions for RNA: ENST00000497056.6

PDCD10-218, Transcript of programmed cell death 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD10, Length 1,276 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-218ENST00000497056 L3MBTL2Q969R5 705 aa12.66□□□□□ -0.38
PDCD10-218ENST00000497056 MSH6P52701 1360 aa12.66□□□□□ -0.38
PDCD10-218ENST00000497056 PLEKHH1Q9ULM0 1364 aa12.66□□□□□ -0.38
PDCD10-218ENST00000497056 LAMC1P11047 1609 aa12.66□□□□□ -0.38
PDCD10-218ENST00000497056 NALCNQ8IZF0 1738 aa12.65□□□□□ -0.38
PDCD10-218ENST00000497056 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.65□□□□□ -0.38
PDCD10-218ENST00000497056 NCOA3Q9Y6Q9 1424 aa12.65□□□□□ -0.38
PDCD10-218ENST00000497056 C14orf37Q86TY3 774 aa12.65□□□□□ -0.38
PDCD10-218ENST00000497056 TECPR2O15040 1411 aa12.64□□□□□ -0.39
PDCD10-218ENST00000497056 WAPLQ7Z5K2 1190 aa12.64□□□□□ -0.39
PDCD10-218ENST00000497056 KNDC1Q76NI1 1749 aa12.64□□□□□ -0.39
PDCD10-218ENST00000497056 ADGRL3Q9HAR2 1447 aa12.63□□□□□ -0.39
PDCD10-218ENST00000497056 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
PDCD10-218ENST00000497056 HSPA1LP34931 641 aa12.63□□□□□ -0.39
PDCD10-218ENST00000497056 ABCC11Q96J66 1382 aa12.63□□□□□ -0.39
PDCD10-218ENST00000497056 C19orf44Q9H6X5 657 aa12.62□□□□□ -0.39
PDCD10-218ENST00000497056 ROBO1Q9Y6N7 1651 aa12.61□□□□□ -0.39
PDCD10-218ENST00000497056 NBPF1Q3BBV0 1214 aa12.6□□□□□ -0.39
PDCD10-218ENST00000497056 STAC3Q96MF2 364 aa12.6□□□□□ -0.39
PDCD10-218ENST00000497056 SLAIN2Q9P270 581 aa12.6□□□□□ -0.39
PDCD10-218ENST00000497056 MST1RQ04912 1400 aa12.6□□□□□ -0.39
PDCD10-218ENST00000497056 ATF3P18847 181 aa12.59□□□□□ -0.39
PDCD10-218ENST00000497056 TRAK1Q9UPV9 953 aa12.59□□□□□ -0.39
PDCD10-218ENST00000497056 DCCP43146 1447 aa12.59□□□□□ -0.39
PDCD10-218ENST00000497056 FAM135BQ49AJ0 1406 aa12.59□□□□□ -0.39
PDCD10-218ENST00000497056 DLC1Q96QB1 1528 aa12.58□□□□□ -0.4
PDCD10-218ENST00000497056 SAFB2Q14151 953 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDCD10-218ENST00000497056 NBPF8Q3BBV2 869 aa12.58□□□□□ -0.4
PDCD10-218ENST00000497056 CADPS2Q86UW7 1296 aa12.58□□□□□ -0.4
PDCD10-218ENST00000497056 PRAM1Q96QH2 718 aa12.58□□□□□ -0.4
PDCD10-218ENST00000497056 KIAA1210Q9ULL0 1709 aa12.57□□□□□ -0.4
PDCD10-218ENST00000497056 SIRT1Q96EB6 747 aa12.56□□□□□ -0.4
PDCD10-218ENST00000497056 PLSCR2Q9NRY7 297 aa12.56□□□□□ -0.4
PDCD10-218ENST00000497056 CDC42BPGQ6DT37 1551 aa12.56□□□□□ -0.4
PDCD10-218ENST00000497056 TONSLQ96HA7 1378 aa12.56□□□□□ -0.4
PDCD10-218ENST00000497056 TRPM1Q7Z4N2 1603 aa12.55□□□□□ -0.4
PDCD10-218ENST00000497056 C1orf167Q5SNV9 1468 aa12.55□□□□□ -0.4
PDCD10-218ENST00000497056 ARHGEF28Q8N1W1 1705 aaKnown RBP12.55□□□□□ -0.4
PDCD10-218ENST00000497056 BRINP3Q76B58 766 aa12.55□□□□□ -0.4
PDCD10-218ENST00000497056 NUTM2FA1L443 756 aa12.54□□□□□ -0.4
PDCD10-218ENST00000497056 POLA2Q14181 598 aa12.53□□□□□ -0.4
PDCD10-218ENST00000497056 DDX17Q92841 729 aaKnown RBP12.53□□□□□ -0.4
PDCD10-218ENST00000497056 ORAI2Q96SN7 254 aa12.53□□□□□ -0.4
PDCD10-218ENST00000497056 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
PDCD10-218ENST00000497056 POGKQ9P215 609 aa12.53□□□□□ -0.4
PDCD10-218ENST00000497056 FMN2Q9NZ56 1722 aa12.52□□□□□ -0.41
PDCD10-218ENST00000497056 HIRIP3Q9BW71 556 aaPredicted RBP12.52□□□□□ -0.41
PDCD10-218ENST00000497056 MINK1Q8N4C8 1332 aaPredicted RBP12.52□□□□□ -0.41
PDCD10-218ENST00000497056 AHDC1Q5TGY3 1603 aaPredicted RBP12.51□□□□□ -0.41
PDCD10-218ENST00000497056 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
PDCD10-218ENST00000497056 CCER1Q8TC90 406 aaPredicted RBP12.51□□□□□ -0.41
PDCD10-218ENST00000497056 ADGRB2O60241 1585 aa12.51□□□□□ -0.41
PDCD10-218ENST00000497056 COL16A1Q07092 1604 aaPredicted RBP12.51□□□□□ -0.41
PDCD10-218ENST00000497056 ATF5Q9Y2D1 282 aaPredicted RBP12.5□□□□□ -0.41
PDCD10-218ENST00000497056 ROCK2O75116 1388 aaKnown RBP12.5□□□□□ -0.41
PDCD10-218ENST00000497056 NHSL1Q5SYE7 1610 aa12.49□□□□□ -0.41
PDCD10-218ENST00000497056 USP32Q8NFA0 1604 aa12.49□□□□□ -0.41
PDCD10-218ENST00000497056 RALGAPBQ86X10 1494 aa12.49□□□□□ -0.41
PDCD10-218ENST00000497056 GPRASP1Q5JY77 1395 aa12.48□□□□□ -0.41
PDCD10-218ENST00000497056 CLSPNQ9HAW4 1339 aa12.48□□□□□ -0.41
PDCD10-218ENST00000497056 FOXD4L1Q9NU39 408 aa12.48□□□□□ -0.41
PDCD10-218ENST00000497056 PRR36Q9H6K5 1346 aa12.47□□□□□ -0.41
PDCD10-218ENST00000497056 ESCO1Q5FWF5 840 aa12.47□□□□□ -0.41
PDCD10-218ENST00000497056 RGPD8O14715 1765 aaPredicted RBP12.46□□□□□ -0.41
PDCD10-218ENST00000497056 QRICH2Q9H0J4 1663 aa12.45□□□□□ -0.42
PDCD10-218ENST00000497056 CENPJQ9HC77 1338 aaPredicted RBP12.45□□□□□ -0.42
PDCD10-218ENST00000497056 MED1Q15648 1581 aaPredicted RBP12.45□□□□□ -0.42
PDCD10-218ENST00000497056 WASLO00401 505 aaPredicted RBP12.45□□□□□ -0.42
PDCD10-218ENST00000497056 XPCQ01831 940 aaPredicted RBP12.45□□□□□ -0.42
PDCD10-218ENST00000497056 TULP4Q9NRJ4 1543 aa12.45□□□□□ -0.42
PDCD10-218ENST00000497056 CARD11Q9BXL7 1154 aa12.44□□□□□ -0.42
PDCD10-218ENST00000497056 ANKARQ7Z5J8 1434 aa12.44□□□□□ -0.42
PDCD10-218ENST00000497056 ATP7BP35670 1465 aa12.43□□□□□ -0.42
PDCD10-218ENST00000497056 PXDNQ92626 1479 aa12.43□□□□□ -0.42
PDCD10-218ENST00000497056 FOXO3O43524 673 aa12.43□□□□□ -0.42
PDCD10-218ENST00000497056 CDK19Q9BWU1 502 aa12.43□□□□□ -0.42
PDCD10-218ENST00000497056 JCADQ9P266 1359 aa12.43□□□□□ -0.42
PDCD10-218ENST00000497056 SOS2Q07890 1332 aaPredicted RBP12.42□□□□□ -0.42
PDCD10-218ENST00000497056 PMFBP1Q8TBY8 1022 aa12.42□□□□□ -0.42
PDCD10-218ENST00000497056 PHF8Q9UPP1 1060 aa12.42□□□□□ -0.42
PDCD10-218ENST00000497056 KIF1AQ12756 1690 aa12.42□□□□□ -0.42
PDCD10-218ENST00000497056 LRP6O75581 1613 aa12.41□□□□□ -0.42
PDCD10-218ENST00000497056 SHPRHQ149N8 1683 aa12.41□□□□□ -0.42
PDCD10-218ENST00000497056 NUDT16Q96DE0 195 aaKnown RBP12.4□□□□□ -0.42
PDCD10-218ENST00000497056 CABP2Q9NPB3 220 aa12.4□□□□□ -0.42
PDCD10-218ENST00000497056 TIMELESSQ9UNS1 1208 aa12.4□□□□□ -0.42
PDCD10-218ENST00000497056 PNPLA6Q8IY17 1366 aa12.4□□□□□ -0.42
PDCD10-218ENST00000497056 NPHP3Q7Z494 1330 aa12.39□□□□□ -0.43
PDCD10-218ENST00000497056 TOPAZ1Q8N9V7 1692 aa12.39□□□□□ -0.43
PDCD10-218ENST00000497056 ZBTB22O15209 634 aa12.39□□□□□ -0.43
PDCD10-218ENST00000497056 ILDR2Q71H61 639 aa12.39□□□□□ -0.43
PDCD10-218ENST00000497056 EIF3AQ14152 1382 aaKnown RBP12.39□□□□□ -0.43
PDCD10-218ENST00000497056 DISP3Q9P2K9 1392 aa12.39□□□□□ -0.43
PDCD10-218ENST00000497056 KRT28Q7Z3Y7 464 aa12.38□□□□□ -0.43
PDCD10-218ENST00000497056 LRRC59Q96AG4 307 aaKnown RBP12.38□□□□□ -0.43
PDCD10-218ENST00000497056 SRPK2P78362 688 aaKnown RBP12.37□□□□□ -0.43
PDCD10-218ENST00000497056 NUTM2BA6NNL0 878 aaPredicted RBP12.36□□□□□ -0.43
PDCD10-218ENST00000497056 NUTM2EB1AL46 878 aaPredicted RBP12.36□□□□□ -0.43
PDCD10-218ENST00000497056 NUTM2AQ8IVF1 878 aaPredicted RBP12.36□□□□□ -0.43
PDCD10-218ENST00000497056 USP47Q96K76 1375 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms