RNA–Protein interactions for RNA: ENST00000496827.1

SEC24C-205, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

TSL 3

Gene SEC24C, Length 948 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-205ENST00000496827 DLC1Q96QB1 1528 aa17.53■□□□□ 0.4
SEC24C-205ENST00000496827 NALCNQ8IZF0 1738 aa17.53■□□□□ 0.4
SEC24C-205ENST00000496827 SAFB2Q14151 953 aaKnown RBP eCLIP17.53■□□□□ 0.4
SEC24C-205ENST00000496827 HSPA1LP34931 641 aa17.52■□□□□ 0.4
SEC24C-205ENST00000496827 NBPF8Q3BBV2 869 aa17.52■□□□□ 0.4
SEC24C-205ENST00000496827 MST1RQ04912 1400 aa17.5■□□□□ 0.39
SEC24C-205ENST00000496827 TIMELESSQ9UNS1 1208 aa17.49■□□□□ 0.39
SEC24C-205ENST00000496827 ROBO1Q9Y6N7 1651 aa17.48■□□□□ 0.39
SEC24C-205ENST00000496827 ROCK2O75116 1388 aaKnown RBP17.48■□□□□ 0.39
SEC24C-205ENST00000496827 TRPM1Q7Z4N2 1603 aa17.47■□□□□ 0.39
SEC24C-205ENST00000496827 BRINP3Q76B58 766 aa17.47■□□□□ 0.39
SEC24C-205ENST00000496827 MINK1Q8N4C8 1332 aaPredicted RBP17.47■□□□□ 0.39
SEC24C-205ENST00000496827 CDC42BPGQ6DT37 1551 aa17.46■□□□□ 0.39
SEC24C-205ENST00000496827 C1orf167Q5SNV9 1468 aa17.46■□□□□ 0.39
SEC24C-205ENST00000496827 NUTM2FA1L443 756 aa17.45■□□□□ 0.38
SEC24C-205ENST00000496827 HIRIP3Q9BW71 556 aaPredicted RBP17.45■□□□□ 0.38
SEC24C-205ENST00000496827 ARHGEF28Q8N1W1 1705 aaKnown RBP17.44■□□□□ 0.38
SEC24C-205ENST00000496827 ORAI2Q96SN7 254 aa17.43■□□□□ 0.38
SEC24C-205ENST00000496827 ESCO1Q5FWF5 840 aa17.42■□□□□ 0.38
SEC24C-205ENST00000496827 CARD11Q9BXL7 1154 aa17.42■□□□□ 0.38
SEC24C-205ENST00000496827 CENPJQ9HC77 1338 aaPredicted RBP17.42■□□□□ 0.38
SEC24C-205ENST00000496827 GPRASP1Q5JY77 1395 aa17.41■□□□□ 0.38
SEC24C-205ENST00000496827 WASLO00401 505 aaPredicted RBP17.41■□□□□ 0.38
SEC24C-205ENST00000496827 RALGAPBQ86X10 1494 aa17.41■□□□□ 0.38
SEC24C-205ENST00000496827 FMN2Q9NZ56 1722 aa17.39■□□□□ 0.37
SEC24C-205ENST00000496827 ADGRB2O60241 1585 aa17.39■□□□□ 0.37
SEC24C-205ENST00000496827 EIF3AQ14152 1382 aaKnown RBP17.38■□□□□ 0.37
SEC24C-205ENST00000496827 PHLPP1O60346 1717 aa17.38■□□□□ 0.37
SEC24C-205ENST00000496827 DDX17Q92841 729 aaKnown RBP17.37■□□□□ 0.37
SEC24C-205ENST00000496827 AHDC1Q5TGY3 1603 aaPredicted RBP17.36■□□□□ 0.37
SEC24C-205ENST00000496827 CDK19Q9BWU1 502 aa17.36■□□□□ 0.37
SEC24C-205ENST00000496827 ANKARQ7Z5J8 1434 aa17.35■□□□□ 0.37
SEC24C-205ENST00000496827 FOXO3O43524 673 aa17.34■□□□□ 0.37
SEC24C-205ENST00000496827 PHF8Q9UPP1 1060 aa17.34■□□□□ 0.37
SEC24C-205ENST00000496827 TULP4Q9NRJ4 1543 aa17.33■□□□□ 0.37
SEC24C-205ENST00000496827 NPHP3Q7Z494 1330 aa17.33■□□□□ 0.36
SEC24C-205ENST00000496827 LRRC59Q96AG4 307 aaKnown RBP17.33■□□□□ 0.36
SEC24C-205ENST00000496827 COL16A1Q07092 1604 aaPredicted RBP17.32■□□□□ 0.36
SEC24C-205ENST00000496827 NHSL1Q5SYE7 1610 aa17.32■□□□□ 0.36
SEC24C-205ENST00000496827 JCADQ9P266 1359 aa17.32■□□□□ 0.36
SEC24C-205ENST00000496827 PRR36Q9H6K5 1346 aa17.32■□□□□ 0.36
SEC24C-205ENST00000496827 SRPK2P78362 688 aaKnown RBP17.32■□□□□ 0.36
SEC24C-205ENST00000496827 NUDT16Q96DE0 195 aaKnown RBP17.32■□□□□ 0.36
SEC24C-205ENST00000496827 QRICH2Q9H0J4 1663 aa17.32■□□□□ 0.36
SEC24C-205ENST00000496827 SOS2Q07890 1332 aaPredicted RBP17.31■□□□□ 0.36
SEC24C-205ENST00000496827 PMFBP1Q8TBY8 1022 aa17.31■□□□□ 0.36
SEC24C-205ENST00000496827 USP32Q8NFA0 1604 aa17.31■□□□□ 0.36
SEC24C-205ENST00000496827 RGPD8O14715 1765 aaPredicted RBP17.3■□□□□ 0.36
SEC24C-205ENST00000496827 EVC2Q86UK5 1308 aa17.3■□□□□ 0.36
SEC24C-205ENST00000496827 XPCQ01831 940 aaPredicted RBP17.3■□□□□ 0.36
SEC24C-205ENST00000496827 CABP2Q9NPB3 220 aa17.29■□□□□ 0.36
SEC24C-205ENST00000496827 KIF1AQ12756 1690 aa17.29■□□□□ 0.36
SEC24C-205ENST00000496827 PSME1Q06323 249 aa17.28■□□□□ 0.36
SEC24C-205ENST00000496827 KRT28Q7Z3Y7 464 aa17.28■□□□□ 0.36
SEC24C-205ENST00000496827 CCDC61Q9Y6R9 512 aa17.28■□□□□ 0.36
SEC24C-205ENST00000496827 ATP7BP35670 1465 aa17.27■□□□□ 0.36
SEC24C-205ENST00000496827 ST20-MTHFSA0A0A6YYL1 179 aa17.27■□□□□ 0.36
SEC24C-205ENST00000496827 NGDNQ8NEJ9 315 aaKnown RBP17.27■□□□□ 0.36
SEC24C-205ENST00000496827 SBNO2Q9Y2G9 1366 aa17.27■□□□□ 0.35
SEC24C-205ENST00000496827 PXDNQ92626 1479 aa17.25■□□□□ 0.35
SEC24C-205ENST00000496827 SPATA31A6Q5VVP1 1343 aa17.25■□□□□ 0.35
SEC24C-205ENST00000496827 USP47Q96K76 1375 aa17.25■□□□□ 0.35
SEC24C-205ENST00000496827 PLEKHG3A1L390 1219 aa17.23■□□□□ 0.35
SEC24C-205ENST00000496827 SLC24A1O60721 1099 aa17.23■□□□□ 0.35
SEC24C-205ENST00000496827 ITSN1Q15811 1721 aa17.23■□□□□ 0.35
SEC24C-205ENST00000496827 PNPLA6Q8IY17 1366 aa17.23■□□□□ 0.35
SEC24C-205ENST00000496827 NUTM2BA6NNL0 878 aaPredicted RBP17.22■□□□□ 0.35
SEC24C-205ENST00000496827 NUTM2EB1AL46 878 aaPredicted RBP17.22■□□□□ 0.35
SEC24C-205ENST00000496827 NUTM2AQ8IVF1 878 aaPredicted RBP17.22■□□□□ 0.35
SEC24C-205ENST00000496827 MED1Q15648 1581 aaPredicted RBP17.22■□□□□ 0.35
SEC24C-205ENST00000496827 SHPRHQ149N8 1683 aa17.22■□□□□ 0.35
SEC24C-205ENST00000496827 ACEP12821 1306 aa17.21■□□□□ 0.35
SEC24C-205ENST00000496827 SPATA31A3Q5VYP0 1347 aa17.21■□□□□ 0.35
SEC24C-205ENST00000496827 PPIP5K1Q6PFW1 1433 aa17.21■□□□□ 0.35
SEC24C-205ENST00000496827 DISP3Q9P2K9 1392 aa17.21■□□□□ 0.35
SEC24C-205ENST00000496827 TESK2Q96S53 571 aa17.21■□□□□ 0.35
SEC24C-205ENST00000496827 CABP1Q9NZU7 370 aa17.21■□□□□ 0.35
SEC24C-205ENST00000496827 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
SEC24C-205ENST00000496827 LMOD2Q6P5Q4 547 aa17.2■□□□□ 0.34
SEC24C-205ENST00000496827 TOPAZ1Q8N9V7 1692 aa17.2■□□□□ 0.34
SEC24C-205ENST00000496827 POLR3AO14802 1390 aaPredicted RBP17.19■□□□□ 0.34
SEC24C-205ENST00000496827 ATAD2Q6PL18 1390 aa17.19■□□□□ 0.34
SEC24C-205ENST00000496827 PAK3O75914 559 aaPredicted RBP17.18■□□□□ 0.34
SEC24C-205ENST00000496827 MEX3CQ5U5Q3 659 aaKnown RBP17.18■□□□□ 0.34
SEC24C-205ENST00000496827 PHF23Q9BUL5 403 aaPredicted RBP17.18■□□□□ 0.34
SEC24C-205ENST00000496827 EIF4G2P78344 907 aaKnown RBP eCLIP17.17■□□□□ 0.34
SEC24C-205ENST00000496827 TMF1P82094 1093 aa17.17■□□□□ 0.34
SEC24C-205ENST00000496827 TNS3Q68CZ2 1445 aa17.17■□□□□ 0.34
SEC24C-205ENST00000496827 PUS7Q96PZ0 661 aaKnown RBP17.17■□□□□ 0.34
SEC24C-205ENST00000496827 LRP6O75581 1613 aa17.16■□□□□ 0.34
SEC24C-205ENST00000496827 ARHGEF10O15013 1369 aa17.15■□□□□ 0.34
SEC24C-205ENST00000496827 TMC1Q8TDI8 760 aa17.15■□□□□ 0.34
SEC24C-205ENST00000496827 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
SEC24C-205ENST00000496827 ADAMTS2O95450 1211 aa17.13■□□□□ 0.33
SEC24C-205ENST00000496827 HSPA5P11021 654 aaKnown RBP17.13■□□□□ 0.33
SEC24C-205ENST00000496827 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
SEC24C-205ENST00000496827 COL22A1Q8NFW1 1626 aaPredicted RBP17.13■□□□□ 0.33
SEC24C-205ENST00000496827 TRPM3Q9HCF6 1732 aaPredicted RBP17.13■□□□□ 0.33
SEC24C-205ENST00000496827 HAP1P54257 671 aaPredicted RBP17.12■□□□□ 0.33
SEC24C-205ENST00000496827 CDCA8Q53HL2 280 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms