RNA–Protein interactions for RNA: ENST00000496269.1

PCOLCE-210, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 995 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-210ENST00000496269 KIAA1210Q9ULL0 1709 aa32.2■■■□□ 2.75
PCOLCE-210ENST00000496269 WAPLQ7Z5K2 1190 aa32.2■■■□□ 2.75
PCOLCE-210ENST00000496269 SIRT1Q96EB6 747 aa32.2■■■□□ 2.75
PCOLCE-210ENST00000496269 FMN2Q9NZ56 1722 aa32.17■■■□□ 2.74
PCOLCE-210ENST00000496269 SHPRHQ149N8 1683 aa32.14■■■□□ 2.74
PCOLCE-210ENST00000496269 ARHGEF28Q8N1W1 1705 aaKnown RBP32.13■■■□□ 2.73
PCOLCE-210ENST00000496269 ADGRB2O60241 1585 aa32.11■■■□□ 2.73
PCOLCE-210ENST00000496269 SIN3AQ96ST3 1273 aa32.11■■■□□ 2.73
PCOLCE-210ENST00000496269 JCADQ9P266 1359 aa32.08■■■□□ 2.73
PCOLCE-210ENST00000496269 PRAM1Q96QH2 718 aa32.05■■■□□ 2.72
PCOLCE-210ENST00000496269 ORAI2Q96SN7 254 aa32.05■■■□□ 2.72
PCOLCE-210ENST00000496269 RGPD8O14715 1765 aaPredicted RBP32.04■■■□□ 2.72
PCOLCE-210ENST00000496269 L3MBTL2Q969R5 705 aa32.03■■■□□ 2.72
PCOLCE-210ENST00000496269 USP32Q8NFA0 1604 aa32.02■■■□□ 2.72
PCOLCE-210ENST00000496269 DDX17Q92841 729 aaKnown RBP32.02■■■□□ 2.72
PCOLCE-210ENST00000496269 ILDR2Q71H61 639 aa32.01■■■□□ 2.71
PCOLCE-210ENST00000496269 TRAK1Q9UPV9 953 aa32.01■■■□□ 2.71
PCOLCE-210ENST00000496269 TRPM1Q7Z4N2 1603 aa32■■■□□ 2.71
PCOLCE-210ENST00000496269 LRP6O75581 1613 aa32■■■□□ 2.71
PCOLCE-210ENST00000496269 KIF1AQ12756 1690 aa31.98■■■□□ 2.71
PCOLCE-210ENST00000496269 PXDNQ92626 1479 aa31.96■■■□□ 2.71
PCOLCE-210ENST00000496269 SAFB2Q14151 953 aaKnown RBP eCLIP31.95■■■□□ 2.71
PCOLCE-210ENST00000496269 NBPF1Q3BBV0 1214 aa31.95■■■□□ 2.71
PCOLCE-210ENST00000496269 SOS2Q07890 1332 aaPredicted RBP31.95■■■□□ 2.7
PCOLCE-210ENST00000496269 NEUROD1Q13562 356 aa31.94■■■□□ 2.7
PCOLCE-210ENST00000496269 POGKQ9P215 609 aa31.93■■■□□ 2.7
PCOLCE-210ENST00000496269 SPATA31A6Q5VVP1 1343 aa31.92■■■□□ 2.7
PCOLCE-210ENST00000496269 NUTM2FA1L443 756 aa31.91■■■□□ 2.7
PCOLCE-210ENST00000496269 PNPLA6Q8IY17 1366 aa31.91■■■□□ 2.7
PCOLCE-210ENST00000496269 ESCO1Q5FWF5 840 aa31.9■■■□□ 2.7
PCOLCE-210ENST00000496269 RGS17Q9UGC6 210 aaPredicted RBP31.9■■■□□ 2.7
PCOLCE-210ENST00000496269 ANKARQ7Z5J8 1434 aa31.9■■■□□ 2.7
PCOLCE-210ENST00000496269 COL22A1Q8NFW1 1626 aaPredicted RBP31.89■■■□□ 2.7
PCOLCE-210ENST00000496269 LRRC59Q96AG4 307 aaKnown RBP31.88■■■□□ 2.69
PCOLCE-210ENST00000496269 TULP4Q9NRJ4 1543 aa31.88■■■□□ 2.69
PCOLCE-210ENST00000496269 MINK1Q8N4C8 1332 aaPredicted RBP31.85■■■□□ 2.69
PCOLCE-210ENST00000496269 NPHP3Q7Z494 1330 aa31.84■■■□□ 2.69
PCOLCE-210ENST00000496269 HIRIP3Q9BW71 556 aaPredicted RBP31.84■■■□□ 2.69
PCOLCE-210ENST00000496269 PHF23Q9BUL5 403 aaPredicted RBP31.83■■■□□ 2.69
PCOLCE-210ENST00000496269 PRR36Q9H6K5 1346 aa31.81■■■□□ 2.68
PCOLCE-210ENST00000496269 QRICH2Q9H0J4 1663 aa31.81■■■□□ 2.68
PCOLCE-210ENST00000496269 FOXO3O43524 673 aa31.81■■■□□ 2.68
PCOLCE-210ENST00000496269 NBPF8Q3BBV2 869 aa31.8■■■□□ 2.68
PCOLCE-210ENST00000496269 TOPAZ1Q8N9V7 1692 aa31.8■■■□□ 2.68
PCOLCE-210ENST00000496269 ATP7BP35670 1465 aa31.79■■■□□ 2.68
PCOLCE-210ENST00000496269 WASLO00401 505 aaPredicted RBP31.79■■■□□ 2.68
PCOLCE-210ENST00000496269 ITSN1Q15811 1721 aa31.78■■■□□ 2.68
PCOLCE-210ENST00000496269 PHF8Q9UPP1 1060 aa31.77■■■□□ 2.68
PCOLCE-210ENST00000496269 EIF3AQ14152 1382 aaKnown RBP31.77■■■□□ 2.68
PCOLCE-210ENST00000496269 GPRASP1Q5JY77 1395 aa31.77■■■□□ 2.68
PCOLCE-210ENST00000496269 TRPM3Q9HCF6 1732 aaPredicted RBP31.75■■■□□ 2.67
PCOLCE-210ENST00000496269 XPCQ01831 940 aaPredicted RBP31.75■■■□□ 2.67
PCOLCE-210ENST00000496269 TONSLQ96HA7 1378 aa31.73■■■□□ 2.67
PCOLCE-210ENST00000496269 RALGAPBQ86X10 1494 aa31.72■■■□□ 2.67
PCOLCE-210ENST00000496269 ROCK2O75116 1388 aaKnown RBP31.7■■■□□ 2.67
PCOLCE-210ENST00000496269 NUTM2BA6NNL0 878 aaPredicted RBP31.7■■■□□ 2.67
PCOLCE-210ENST00000496269 NUTM2EB1AL46 878 aaPredicted RBP31.7■■■□□ 2.67
PCOLCE-210ENST00000496269 NUTM2AQ8IVF1 878 aaPredicted RBP31.7■■■□□ 2.67
PCOLCE-210ENST00000496269 PCGF6Q9BYE7 350 aa31.7■■■□□ 2.67
PCOLCE-210ENST00000496269 CENPJQ9HC77 1338 aaPredicted RBP31.7■■■□□ 2.66
PCOLCE-210ENST00000496269 MARF1Q9Y4F3 1742 aaKnown RBP31.69■■■□□ 2.66
PCOLCE-210ENST00000496269 POTEAQ6S8J7 498 aa31.69■■■□□ 2.66
PCOLCE-210ENST00000496269 SPATA31A3Q5VYP0 1347 aa31.69■■■□□ 2.66
PCOLCE-210ENST00000496269 ALS2Q96Q42 1657 aa31.67■■■□□ 2.66
PCOLCE-210ENST00000496269 ABCA3Q99758 1704 aa31.67■■■□□ 2.66
PCOLCE-210ENST00000496269 KRT28Q7Z3Y7 464 aa31.67■■■□□ 2.66
PCOLCE-210ENST00000496269 TNS3Q68CZ2 1445 aa31.66■■■□□ 2.66
PCOLCE-210ENST00000496269 SBNO1A3KN83 1393 aa31.66■■■□□ 2.66
PCOLCE-210ENST00000496269 PMFBP1Q8TBY8 1022 aa31.65■■■□□ 2.66
PCOLCE-210ENST00000496269 CDK19Q9BWU1 502 aa31.65■■■□□ 2.66
PCOLCE-210ENST00000496269 MEX3CQ5U5Q3 659 aaKnown RBP31.63■■■□□ 2.65
PCOLCE-210ENST00000496269 NUDT16Q96DE0 195 aaKnown RBP31.63■■■□□ 2.65
PCOLCE-210ENST00000496269 SOCS7O14512 581 aa31.6■■■□□ 2.65
PCOLCE-210ENST00000496269 CRYBG1Q9Y4K1 1723 aa31.59■■■□□ 2.65
PCOLCE-210ENST00000496269 CLSPNQ9HAW4 1339 aa31.57■■■□□ 2.64
PCOLCE-210ENST00000496269 POLR3AO14802 1390 aaPredicted RBP31.56■■■□□ 2.64
PCOLCE-210ENST00000496269 AFF2P51816 1311 aa31.56■■■□□ 2.64
PCOLCE-210ENST00000496269 PSME1Q06323 249 aa31.56■■■□□ 2.64
PCOLCE-210ENST00000496269 ADAMTS2O95450 1211 aa31.53■■■□□ 2.64
PCOLCE-210ENST00000496269 ZNF772Q68DY9 489 aaPredicted RBP31.53■■■□□ 2.64
PCOLCE-210ENST00000496269 C8orf37Q96NL8 207 aa31.53■■■□□ 2.64
PCOLCE-210ENST00000496269 SBNO2Q9Y2G9 1366 aa31.53■■■□□ 2.64
PCOLCE-210ENST00000496269 PLEKHG3A1L390 1219 aa31.52■■■□□ 2.64
PCOLCE-210ENST00000496269 CCDC61Q9Y6R9 512 aa31.52■■■□□ 2.64
PCOLCE-210ENST00000496269 ARHGEF10O15013 1369 aa31.52■■■□□ 2.64
PCOLCE-210ENST00000496269 CARD11Q9BXL7 1154 aa31.51■■■□□ 2.63
PCOLCE-210ENST00000496269 CABP2Q9NPB3 220 aa31.5■■■□□ 2.63
PCOLCE-210ENST00000496269 PPIP5K1Q6PFW1 1433 aa31.49■■■□□ 2.63
PCOLCE-210ENST00000496269 NGDNQ8NEJ9 315 aaKnown RBP31.48■■■□□ 2.63
PCOLCE-210ENST00000496269 ACEP12821 1306 aa31.48■■■□□ 2.63
PCOLCE-210ENST00000496269 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.47■■■□□ 2.63
PCOLCE-210ENST00000496269 SRPK2P78362 688 aaKnown RBP31.46■■■□□ 2.63
PCOLCE-210ENST00000496269 FNBP4Q8N3X1 1017 aaPredicted RBP31.46■■■□□ 2.63
PCOLCE-210ENST00000496269 EVC2Q86UK5 1308 aa31.45■■■□□ 2.62
PCOLCE-210ENST00000496269 PHRF1Q9P1Y6 1649 aaKnown RBP31.43■■■□□ 2.62
PCOLCE-210ENST00000496269 CABLES1Q8TDN4 633 aa31.43■■■□□ 2.62
PCOLCE-210ENST00000496269 NGLY1Q96IV0 654 aa31.43■■■□□ 2.62
PCOLCE-210ENST00000496269 BCL9LQ86UU0 1499 aa31.43■■■□□ 2.62
PCOLCE-210ENST00000496269 PLCH1Q4KWH8 1693 aa31.43■■■□□ 2.62
PCOLCE-210ENST00000496269 SLIT2O94813 1529 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms