RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 MDM2Q00987 491 aaPredicted RBP12.25□□□□□ -0.45
CLTC-208ENST00000496076 CYP4X1Q8N118 509 aa12.25□□□□□ -0.45
CLTC-208ENST00000496076 MINK1Q8N4C8 1332 aaPredicted RBP12.24□□□□□ -0.45
CLTC-208ENST00000496076 VSIG10Q8N0Z9 540 aa12.23□□□□□ -0.45
CLTC-208ENST00000496076 MMP16P51512 607 aa12.21□□□□□ -0.45
CLTC-208ENST00000496076 USB1Q9BQ65 265 aaKnown RBP12.21□□□□□ -0.45
CLTC-208ENST00000496076 AVPP01185 164 aa12.2□□□□□ -0.46
CLTC-208ENST00000496076 HLA-CQ95604 372 aa12.2□□□□□ -0.46
CLTC-208ENST00000496076 CRIPAKQ8N1N5 446 aa12.19□□□□□ -0.46
CLTC-208ENST00000496076 USP46P62068 366 aa12.18□□□□□ -0.46
CLTC-208ENST00000496076 CCDC102AQ96A19 550 aa12.18□□□□□ -0.46
CLTC-208ENST00000496076 DACH1Q9UI36 760 aa12.18□□□□□ -0.46
CLTC-208ENST00000496076 TTC24A2A3L6 582 aaPredicted RBP12.17□□□□□ -0.46
CLTC-208ENST00000496076 TRIM32Q13049 653 aa12.17□□□□□ -0.46
CLTC-208ENST00000496076 WNT7AO00755 349 aa12.16□□□□□ -0.46
CLTC-208ENST00000496076 AXIN1O15169 862 aa12.16□□□□□ -0.46
CLTC-208ENST00000496076 DXOO77932 396 aaKnown RBP12.16□□□□□ -0.46
CLTC-208ENST00000496076 HOXA2O43364 376 aa12.15□□□□□ -0.46
CLTC-208ENST00000496076 CTC1Q2NKJ3 1217 aa12.14□□□□□ -0.47
CLTC-208ENST00000496076 GPCPD1Q9NPB8 672 aa12.14□□□□□ -0.47
CLTC-208ENST00000496076 CLCN1P35523 988 aa12.13□□□□□ -0.47
CLTC-208ENST00000496076 CCDC24Q8N4L8 307 aa12.13□□□□□ -0.47
CLTC-208ENST00000496076 SNIP1Q8TAD8 396 aaKnown RBP12.12□□□□□ -0.47
CLTC-208ENST00000496076 MRGPRX2Q96LB1 330 aa12.12□□□□□ -0.47
CLTC-208ENST00000496076 FAM217BQ9NTX9 383 aaPredicted RBP12.12□□□□□ -0.47
CLTC-208ENST00000496076 SMCPP49901 116 aaPredicted RBP12.11□□□□□ -0.47
CLTC-208ENST00000496076 GUCA2AQ02747 115 aa12.11□□□□□ -0.47
CLTC-208ENST00000496076 KRI1Q8N9T8 703 aaKnown RBP12.11□□□□□ -0.47
CLTC-208ENST00000496076 GMPR2Q9P2T1 348 aaKnown RBP12.11□□□□□ -0.47
CLTC-208ENST00000496076 SMPD1P17405 629 aa12.1□□□□□ -0.47
CLTC-208ENST00000496076 NUTM1Q86Y26 1132 aa12.09□□□□□ -0.47
CLTC-208ENST00000496076 SYMPKQ92797 1274 aaKnown RBP12.09□□□□□ -0.47
CLTC-208ENST00000496076 C11orf95C9JLR9 678 aaPredicted RBP12.08□□□□□ -0.48
CLTC-208ENST00000496076 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLTC-208ENST00000496076 J3QL48 77 aa12.07□□□□□ -0.48
CLTC-208ENST00000496076 TREML4Q6UXN2 200 aa12.07□□□□□ -0.48
CLTC-208ENST00000496076 JUNDP17535 347 aa12.05□□□□□ -0.48
CLTC-208ENST00000496076 RC3H1Q5TC82 1133 aaKnown RBP12.05□□□□□ -0.48
CLTC-208ENST00000496076 REPIN1Q9BWE0 567 aaKnown RBP12.05□□□□□ -0.48
CLTC-208ENST00000496076 SKOR1P84550 965 aa12.04□□□□□ -0.48
CLTC-208ENST00000496076 WNT7BP56706 349 aa12.03□□□□□ -0.48
CLTC-208ENST00000496076 LCE2AQ5TA79 106 aaPredicted RBP12.02□□□□□ -0.49
CLTC-208ENST00000496076 RETREG3Q86VR2 466 aa12.02□□□□□ -0.49
CLTC-208ENST00000496076 FDX1P10109 184 aa12.01□□□□□ -0.49
CLTC-208ENST00000496076 SSTR3P32745 418 aaPredicted RBP12.01□□□□□ -0.49
CLTC-208ENST00000496076 HPS1Q92902 700 aa12.01□□□□□ -0.49
CLTC-208ENST00000496076 NUDT12Q9BQG2 462 aa12□□□□□ -0.49
CLTC-208ENST00000496076 ATP13A2Q9NQ11 1180 aa12□□□□□ -0.49
CLTC-208ENST00000496076 PCDHGC3Q9UN70 934 aa12□□□□□ -0.49
CLTC-208ENST00000496076 C6orf229H3BNL8 230 aa11.99□□□□□ -0.49
CLTC-208ENST00000496076 PTCRAQ6ISU1 281 aaPredicted RBP11.99□□□□□ -0.49
CLTC-208ENST00000496076 SPIRE2Q8WWL2 714 aa11.97□□□□□ -0.49
CLTC-208ENST00000496076 ALDH1A1P00352 501 aa11.96□□□□□ -0.49
CLTC-208ENST00000496076 BARGINQ6ZT62 677 aa11.96□□□□□ -0.49
CLTC-208ENST00000496076 WFS1O76024 890 aa11.95□□□□□ -0.5
CLTC-208ENST00000496076 MS4A1P11836 297 aa11.94□□□□□ -0.5
CLTC-208ENST00000496076 SNRPBP14678 240 aaKnown RBP11.94□□□□□ -0.5
CLTC-208ENST00000496076 NDUFV2P19404 249 aa11.94□□□□□ -0.5
CLTC-208ENST00000496076 TTLL12Q14166 644 aaPredicted RBP11.94□□□□□ -0.5
CLTC-208ENST00000496076 ZMYND10O75800 440 aa11.93□□□□□ -0.5
CLTC-208ENST00000496076 SENP2Q9HC62 589 aa11.93□□□□□ -0.5
CLTC-208ENST00000496076 MOXD2PA6NHM9 499 aa11.92□□□□□ -0.5
CLTC-208ENST00000496076 SIAH2O43255 324 aa11.92□□□□□ -0.5
CLTC-208ENST00000496076 CCNYL3P0C7X3 344 aa11.92□□□□□ -0.5
CLTC-208ENST00000496076 EHBP1Q8NDI1 1231 aa11.92□□□□□ -0.5
CLTC-208ENST00000496076 TRIM47Q96LD4 638 aa11.92□□□□□ -0.5
CLTC-208ENST00000496076 NFX1Q12986 1120 aaKnown RBP11.91□□□□□ -0.5
CLTC-208ENST00000496076 AMHR2Q16671 573 aa11.9□□□□□ -0.5
CLTC-208ENST00000496076 SH3BP2P78314 561 aa11.89□□□□□ -0.51
CLTC-208ENST00000496076 GIGYF2Q6Y7W6 1299 aaKnown RBP11.89□□□□□ -0.51
CLTC-208ENST00000496076 ZC3H15Q8WU90 426 aaKnown RBP11.89□□□□□ -0.51
CLTC-208ENST00000496076 EVA1BQ9NVM1 165 aa11.89□□□□□ -0.51
CLTC-208ENST00000496076 PTPRNQ16849 979 aa11.88□□□□□ -0.51
CLTC-208ENST00000496076 PRR7Q8TB68 274 aa11.88□□□□□ -0.51
CLTC-208ENST00000496076 KIFC2Q96AC6 838 aa11.87□□□□□ -0.51
CLTC-208ENST00000496076 BEGAINQ9BUH8 593 aa11.87□□□□□ -0.51
CLTC-208ENST00000496076 MTMR2Q13614 643 aa11.86□□□□□ -0.51
CLTC-208ENST00000496076 UNC93B1Q9H1C4 597 aa11.86□□□□□ -0.51
CLTC-208ENST00000496076 WASF2Q9Y6W5 498 aa11.86□□□□□ -0.51
CLTC-208ENST00000496076 SPDYE5A6NIY4 337 aa11.85□□□□□ -0.51
CLTC-208ENST00000496076 TERTO14746 1132 aaKnown RBP11.85□□□□□ -0.51
CLTC-208ENST00000496076 KCNH2Q12809 1159 aa11.85□□□□□ -0.51
CLTC-208ENST00000496076 BAP1Q92560 729 aa11.85□□□□□ -0.51
CLTC-208ENST00000496076 LINC01559Q495D7 138 aa11.84□□□□□ -0.51
CLTC-208ENST00000496076 DESI1Q6ICB0 168 aa11.83□□□□□ -0.52
CLTC-208ENST00000496076 CAPN5O15484 640 aaPredicted RBP11.82□□□□□ -0.52
CLTC-208ENST00000496076 TBC1D2Q9BYX2 928 aa11.82□□□□□ -0.52
CLTC-208ENST00000496076 WIPF1O43516 503 aa11.8□□□□□ -0.52
CLTC-208ENST00000496076 GJA5P36382 358 aa11.8□□□□□ -0.52
CLTC-208ENST00000496076 DIXDC1Q155Q3 683 aa11.8□□□□□ -0.52
CLTC-208ENST00000496076 BMP1P13497 986 aa11.79□□□□□ -0.52
CLTC-208ENST00000496076 RSBN1LQ6PCB5 846 aaPredicted RBP11.79□□□□□ -0.52
CLTC-208ENST00000496076 TRIM46Q7Z4K8 759 aa11.79□□□□□ -0.52
CLTC-208ENST00000496076 PARP9Q8IXQ6 854 aa11.79□□□□□ -0.52
CLTC-208ENST00000496076 ZNF511Q8NB15 262 aa11.79□□□□□ -0.52
CLTC-208ENST00000496076 PCDHB15Q9Y5E8 787 aa11.79□□□□□ -0.52
CLTC-208ENST00000496076 LCE2CQ5TA81 110 aa11.78□□□□□ -0.52
CLTC-208ENST00000496076 TLL2Q9Y6L7 1015 aa11.78□□□□□ -0.52
CLTC-208ENST00000496076 TRIM66O15016 1216 aa11.77□□□□□ -0.53
CLTC-208ENST00000496076 VARSP26640 1264 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms