RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 LRRC7Q96NW7 1537 aa27.33■■□□□ 1.97
ATG3-208ENST00000495756 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.33■■□□□ 1.97
ATG3-208ENST00000495756 TMEM94Q12767 1356 aa27.32■■□□□ 1.96
ATG3-208ENST00000495756 MINK1Q8N4C8 1332 aaPredicted RBP27.32■■□□□ 1.96
ATG3-208ENST00000495756 NCOA3Q9Y6Q9 1424 aa27.29■■□□□ 1.96
ATG3-208ENST00000495756 NALCNQ8IZF0 1738 aa27.28■■□□□ 1.96
ATG3-208ENST00000495756 SLC24A1O60721 1099 aa27.28■■□□□ 1.96
ATG3-208ENST00000495756 ADGRL3Q9HAR2 1447 aa27.28■■□□□ 1.96
ATG3-208ENST00000495756 XIRP1Q702N8 1843 aaKnown RBP27.27■■□□□ 1.96
ATG3-208ENST00000495756 ADGRB2O60241 1585 aa27.27■■□□□ 1.96
ATG3-208ENST00000495756 C14orf37Q86TY3 774 aa27.26■■□□□ 1.95
ATG3-208ENST00000495756 TULP4Q9NRJ4 1543 aa27.25■■□□□ 1.95
ATG3-208ENST00000495756 TMF1P82094 1093 aa27.24■■□□□ 1.95
ATG3-208ENST00000495756 EVC2Q86UK5 1308 aa27.23■■□□□ 1.95
ATG3-208ENST00000495756 DISP3Q9P2K9 1392 aa27.23■■□□□ 1.95
ATG3-208ENST00000495756 WASLO00401 505 aaPredicted RBP27.21■■□□□ 1.95
ATG3-208ENST00000495756 C19orf44Q9H6X5 657 aa27.21■■□□□ 1.95
ATG3-208ENST00000495756 CDC42BPGQ6DT37 1551 aa27.21■■□□□ 1.95
ATG3-208ENST00000495756 C11orf95C9JLR9 678 aaPredicted RBP27.19■■□□□ 1.94
ATG3-208ENST00000495756 CDK19Q9BWU1 502 aa27.19■■□□□ 1.94
ATG3-208ENST00000495756 MSH6P52701 1360 aa27.18■■□□□ 1.94
ATG3-208ENST00000495756 DCCP43146 1447 aa27.16■■□□□ 1.94
ATG3-208ENST00000495756 ZNF316A6NFI3 1004 aaPredicted RBP27.16■■□□□ 1.94
ATG3-208ENST00000495756 CDCA8Q53HL2 280 aa27.16■■□□□ 1.94
ATG3-208ENST00000495756 SRPK2P78362 688 aaKnown RBP27.15■■□□□ 1.94
ATG3-208ENST00000495756 CABP2Q9NPB3 220 aa27.15■■□□□ 1.94
ATG3-208ENST00000495756 FMN2Q9NZ56 1722 aa27.14■■□□□ 1.94
ATG3-208ENST00000495756 PUS7Q96PZ0 661 aaKnown RBP27.13■■□□□ 1.93
ATG3-208ENST00000495756 KIF7Q2M1P5 1343 aa27.13■■□□□ 1.93
ATG3-208ENST00000495756 ATF3P18847 181 aa27.13■■□□□ 1.93
ATG3-208ENST00000495756 WASHC2AQ641Q2 1341 aa27.12■■□□□ 1.93
ATG3-208ENST00000495756 CCDC7Q96M83 1385 aa27.12■■□□□ 1.93
ATG3-208ENST00000495756 CADPS2Q86UW7 1296 aa27.11■■□□□ 1.93
ATG3-208ENST00000495756 ATP7BP35670 1465 aa27.09■■□□□ 1.93
ATG3-208ENST00000495756 PRR36Q9H6K5 1346 aa27.08■■□□□ 1.93
ATG3-208ENST00000495756 NUTM2FA1L443 756 aa27.08■■□□□ 1.93
ATG3-208ENST00000495756 NUDT16Q96DE0 195 aaKnown RBP27.08■■□□□ 1.93
ATG3-208ENST00000495756 POLR3GLQ9BT43 218 aa27.08■■□□□ 1.93
ATG3-208ENST00000495756 USP32Q8NFA0 1604 aa27.08■■□□□ 1.93
ATG3-208ENST00000495756 ANKARQ7Z5J8 1434 aa27.08■■□□□ 1.93
ATG3-208ENST00000495756 ATAD2Q6PL18 1390 aa27.08■■□□□ 1.92
ATG3-208ENST00000495756 IQSEC2Q5JU85 1478 aa27.06■■□□□ 1.92
ATG3-208ENST00000495756 MST1RQ04912 1400 aa27.05■■□□□ 1.92
ATG3-208ENST00000495756 CERKQ8TCT0 537 aa27.05■■□□□ 1.92
ATG3-208ENST00000495756 RGPD8O14715 1765 aaPredicted RBP27.04■■□□□ 1.92
ATG3-208ENST00000495756 CCDC61Q9Y6R9 512 aa27.04■■□□□ 1.92
ATG3-208ENST00000495756 C1orf167Q5SNV9 1468 aa27.03■■□□□ 1.92
ATG3-208ENST00000495756 TOPAZ1Q8N9V7 1692 aa27.02■■□□□ 1.92
ATG3-208ENST00000495756 ITSN1Q15811 1721 aa27.01■■□□□ 1.91
ATG3-208ENST00000495756 MYOM1P52179 1685 aa27.01■■□□□ 1.91
ATG3-208ENST00000495756 PPIP5K1Q6PFW1 1433 aa27■■□□□ 1.91
ATG3-208ENST00000495756 TMC1Q8TDI8 760 aa27■■□□□ 1.91
ATG3-208ENST00000495756 SLAIN2Q9P270 581 aa27■■□□□ 1.91
ATG3-208ENST00000495756 NINLQ9Y2I6 1382 aa26.99■■□□□ 1.91
ATG3-208ENST00000495756 CABP1Q9NZU7 370 aa26.99■■□□□ 1.91
ATG3-208ENST00000495756 SLC12A5Q9H2X9 1139 aa26.98■■□□□ 1.91
ATG3-208ENST00000495756 ILDR1Q86SU0 546 aaPredicted RBP26.97■■□□□ 1.91
ATG3-208ENST00000495756 ESCO1Q5FWF5 840 aa26.96■■□□□ 1.91
ATG3-208ENST00000495756 PLEKHG3A1L390 1219 aa26.95■■□□□ 1.91
ATG3-208ENST00000495756 ORAI2Q96SN7 254 aa26.95■■□□□ 1.91
ATG3-208ENST00000495756 PHF8Q9UPP1 1060 aa26.93■■□□□ 1.9
ATG3-208ENST00000495756 TOM1O60784 492 aa26.93■■□□□ 1.9
ATG3-208ENST00000495756 PMFBP1Q8TBY8 1022 aa26.92■■□□□ 1.9
ATG3-208ENST00000495756 CD163L1Q9NR16 1453 aa26.91■■□□□ 1.9
ATG3-208ENST00000495756 KIF1AQ12756 1690 aa26.9■■□□□ 1.9
ATG3-208ENST00000495756 UBAP1LF5GYI3 381 aa26.89■■□□□ 1.9
ATG3-208ENST00000495756 POLR3AO14802 1390 aaPredicted RBP26.89■■□□□ 1.9
ATG3-208ENST00000495756 ACEP12821 1306 aa26.89■■□□□ 1.9
ATG3-208ENST00000495756 DDX10Q13206 875 aaKnown RBP26.89■■□□□ 1.9
ATG3-208ENST00000495756 BRINP3Q76B58 766 aa26.89■■□□□ 1.9
ATG3-208ENST00000495756 ANKRD36BQ8N2N9 1353 aa26.89■■□□□ 1.9
ATG3-208ENST00000495756 TERF2IPQ9NYB0 399 aa26.89■■□□□ 1.9
ATG3-208ENST00000495756 CPSF1Q10570 1443 aaKnown RBP26.88■■□□□ 1.89
ATG3-208ENST00000495756 A0A1W2PP64 1363 aa26.88■■□□□ 1.89
ATG3-208ENST00000495756 NGDNQ8NEJ9 315 aaKnown RBP26.87■■□□□ 1.89
ATG3-208ENST00000495756 PANK3Q9H999 370 aa26.87■■□□□ 1.89
ATG3-208ENST00000495756 HDGFL2Q7Z4V5 671 aaPredicted RBP26.87■■□□□ 1.89
ATG3-208ENST00000495756 AKAP12Q02952 1782 aa26.86■■□□□ 1.89
ATG3-208ENST00000495756 FOXO3O43524 673 aa26.84■■□□□ 1.89
ATG3-208ENST00000495756 ZNF692Q9BU19 519 aaPredicted RBP26.84■■□□□ 1.89
ATG3-208ENST00000495756 ROBO1Q9Y6N7 1651 aa26.83■■□□□ 1.89
ATG3-208ENST00000495756 KTN1Q86UP2 1357 aaKnown RBP26.83■■□□□ 1.89
ATG3-208ENST00000495756 MON2Q7Z3U7 1717 aa26.82■■□□□ 1.88
ATG3-208ENST00000495756 CARD14Q9BXL6 1004 aa26.81■■□□□ 1.88
ATG3-208ENST00000495756 PIP4K2BP78356 416 aa26.81■■□□□ 1.88
ATG3-208ENST00000495756 USP6P35125 1406 aa26.8■■□□□ 1.88
ATG3-208ENST00000495756 PSME1Q06323 249 aa26.8■■□□□ 1.88
ATG3-208ENST00000495756 NPHP3Q7Z494 1330 aa26.79■■□□□ 1.88
ATG3-208ENST00000495756 FBXO41Q8TF61 875 aa26.79■■□□□ 1.88
ATG3-208ENST00000495756 DDX17Q92841 729 aaKnown RBP26.78■■□□□ 1.88
ATG3-208ENST00000495756 NHSL1Q5SYE7 1610 aa26.77■■□□□ 1.88
ATG3-208ENST00000495756 EDC4Q6P2E9 1401 aaKnown RBP26.77■■□□□ 1.88
ATG3-208ENST00000495756 NSD3Q9BZ95 1437 aa26.77■■□□□ 1.88
ATG3-208ENST00000495756 SCAF1Q9H7N4 1312 aaKnown RBP26.77■■□□□ 1.88
ATG3-208ENST00000495756 PER1O15534 1290 aaPredicted RBP26.76■■□□□ 1.87
ATG3-208ENST00000495756 XPCQ01831 940 aaPredicted RBP26.75■■□□□ 1.87
ATG3-208ENST00000495756 KRT28Q7Z3Y7 464 aa26.75■■□□□ 1.87
ATG3-208ENST00000495756 SSH2Q76I76 1423 aa26.75■■□□□ 1.87
ATG3-208ENST00000495756 NRKQ7Z2Y5 1582 aa26.75■■□□□ 1.87
ATG3-208ENST00000495756 PXDNQ92626 1479 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms