RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, humanhuman

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-208ENST00000495327 SIRT1Q96EB6 747 aa19.47■□□□□ 0.71
RBM28-208ENST00000495327 STK26Q9P289 416 aa19.47■□□□□ 0.71
RBM28-208ENST00000495327 ADGRB2O60241 1585 aa19.47■□□□□ 0.71
RBM28-208ENST00000495327 PLEKHH1Q9ULM0 1364 aa19.46■□□□□ 0.71
RBM28-208ENST00000495327 ARHGEF28Q8N1W1 1705 aaKnown RBP19.45■□□□□ 0.7
RBM28-208ENST00000495327 DCAF11Q8TEB1 546 aa19.45■□□□□ 0.7
RBM28-208ENST00000495327 KIF1AQ12756 1690 aa19.44■□□□□ 0.7
RBM28-208ENST00000495327 WAPLQ7Z5K2 1190 aa19.43■□□□□ 0.7
RBM28-208ENST00000495327 PHF23Q9BUL5 403 aaPredicted RBP19.43■□□□□ 0.7
RBM28-208ENST00000495327 SPATA31A6Q5VVP1 1343 aa19.42■□□□□ 0.7
RBM28-208ENST00000495327 RGPD8O14715 1765 aaPredicted RBP19.42■□□□□ 0.7
RBM28-208ENST00000495327 LRP6O75581 1613 aa19.41■□□□□ 0.7
RBM28-208ENST00000495327 KDM2AQ9Y2K7 1162 aa19.41■□□□□ 0.7
RBM28-208ENST00000495327 COL22A1Q8NFW1 1626 aaPredicted RBP19.39■□□□□ 0.69
RBM28-208ENST00000495327 ORAI2Q96SN7 254 aa19.38■□□□□ 0.69
RBM28-208ENST00000495327 USP32Q8NFA0 1604 aa19.37■□□□□ 0.69
RBM28-208ENST00000495327 PXDNQ92626 1479 aa19.36■□□□□ 0.69
RBM28-208ENST00000495327 SOS2Q07890 1332 aaPredicted RBP19.36■□□□□ 0.69
RBM28-208ENST00000495327 LRRC59Q96AG4 307 aaKnown RBP19.36■□□□□ 0.69
RBM28-208ENST00000495327 PRAM1Q96QH2 718 aa19.36■□□□□ 0.69
RBM28-208ENST00000495327 PNPLA6Q8IY17 1366 aa19.35■□□□□ 0.69
RBM28-208ENST00000495327 TRIM26Q12899 539 aaPredicted RBP19.35■□□□□ 0.69
RBM28-208ENST00000495327 DDX17Q92841 729 aaKnown RBP19.35■□□□□ 0.69
RBM28-208ENST00000495327 RGS17Q9UGC6 210 aaPredicted RBP19.34■□□□□ 0.69
RBM28-208ENST00000495327 ANKARQ7Z5J8 1434 aa19.34■□□□□ 0.69
RBM28-208ENST00000495327 TRPM1Q7Z4N2 1603 aa19.33■□□□□ 0.69
RBM28-208ENST00000495327 NPHP3Q7Z494 1330 aa19.33■□□□□ 0.69
RBM28-208ENST00000495327 ITSN1Q15811 1721 aa19.33■□□□□ 0.68
RBM28-208ENST00000495327 SOCS7O14512 581 aa19.32■□□□□ 0.68
RBM28-208ENST00000495327 ESCO1Q5FWF5 840 aa19.32■□□□□ 0.68
RBM28-208ENST00000495327 POGKQ9P215 609 aa19.32■□□□□ 0.68
RBM28-208ENST00000495327 TRAK1Q9UPV9 953 aa19.32■□□□□ 0.68
RBM28-208ENST00000495327 TULP4Q9NRJ4 1543 aa19.31■□□□□ 0.68
RBM28-208ENST00000495327 MARF1Q9Y4F3 1742 aaKnown RBP19.3■□□□□ 0.68
RBM28-208ENST00000495327 EIF3AQ14152 1382 aaKnown RBP19.3■□□□□ 0.68
RBM28-208ENST00000495327 SAFB2Q14151 953 aaKnown RBP eCLIP19.29■□□□□ 0.68
RBM28-208ENST00000495327 NUTM2FA1L443 756 aa19.28■□□□□ 0.68
RBM28-208ENST00000495327 SIN3AQ96ST3 1273 aa19.27■□□□□ 0.68
RBM28-208ENST00000495327 TOPAZ1Q8N9V7 1692 aa19.27■□□□□ 0.67
RBM28-208ENST00000495327 QRICH2Q9H0J4 1663 aa19.27■□□□□ 0.67
RBM28-208ENST00000495327 MEX3CQ5U5Q3 659 aaKnown RBP19.26■□□□□ 0.67
RBM28-208ENST00000495327 L3MBTL2Q969R5 705 aa19.26■□□□□ 0.67
RBM28-208ENST00000495327 FOXO3O43524 673 aa19.25■□□□□ 0.67
RBM28-208ENST00000495327 TRPM3Q9HCF6 1732 aaPredicted RBP19.25■□□□□ 0.67
RBM28-208ENST00000495327 ATP7BP35670 1465 aa19.24■□□□□ 0.67
RBM28-208ENST00000495327 ABCA3Q99758 1704 aa19.24■□□□□ 0.67
RBM28-208ENST00000495327 MINK1Q8N4C8 1332 aaPredicted RBP19.24■□□□□ 0.67
RBM28-208ENST00000495327 POTEAQ6S8J7 498 aa19.23■□□□□ 0.67
RBM28-208ENST00000495327 PHF8Q9UPP1 1060 aa19.23■□□□□ 0.67
RBM28-208ENST00000495327 NUTM2BA6NNL0 878 aaPredicted RBP19.22■□□□□ 0.67
RBM28-208ENST00000495327 NUTM2EB1AL46 878 aaPredicted RBP19.22■□□□□ 0.67
RBM28-208ENST00000495327 WASLO00401 505 aaPredicted RBP19.22■□□□□ 0.67
RBM28-208ENST00000495327 NBPF1Q3BBV0 1214 aa19.22■□□□□ 0.67
RBM28-208ENST00000495327 NUTM2AQ8IVF1 878 aaPredicted RBP19.22■□□□□ 0.67
RBM28-208ENST00000495327 HIRIP3Q9BW71 556 aaPredicted RBP19.22■□□□□ 0.67
RBM28-208ENST00000495327 TNS3Q68CZ2 1445 aa19.21■□□□□ 0.67
RBM28-208ENST00000495327 ALS2Q96Q42 1657 aa19.2■□□□□ 0.66
RBM28-208ENST00000495327 NEUROD1Q13562 356 aa19.2■□□□□ 0.66
RBM28-208ENST00000495327 ZNF772Q68DY9 489 aaPredicted RBP19.2■□□□□ 0.66
RBM28-208ENST00000495327 PRR36Q9H6K5 1346 aa19.2■□□□□ 0.66
RBM28-208ENST00000495327 XPCQ01831 940 aaPredicted RBP19.19■□□□□ 0.66
RBM28-208ENST00000495327 SPATA31A3Q5VYP0 1347 aa19.19■□□□□ 0.66
RBM28-208ENST00000495327 SBNO1A3KN83 1393 aa19.19■□□□□ 0.66
RBM28-208ENST00000495327 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.17■□□□□ 0.66
RBM28-208ENST00000495327 KRT28Q7Z3Y7 464 aa19.17■□□□□ 0.66
RBM28-208ENST00000495327 AFF2P51816 1311 aa19.17■□□□□ 0.66
RBM28-208ENST00000495327 CRYBG1Q9Y4K1 1723 aa19.17■□□□□ 0.66
RBM28-208ENST00000495327 GPRASP1Q5JY77 1395 aa19.16■□□□□ 0.66
RBM28-208ENST00000495327 PSME1Q06323 249 aa19.15■□□□□ 0.66
RBM28-208ENST00000495327 C8orf37Q96NL8 207 aa19.15■□□□□ 0.66
RBM28-208ENST00000495327 CENPJQ9HC77 1338 aaPredicted RBP19.15■□□□□ 0.66
RBM28-208ENST00000495327 ROCK2O75116 1388 aaKnown RBP19.15■□□□□ 0.66
RBM28-208ENST00000495327 TONSLQ96HA7 1378 aa19.15■□□□□ 0.66
RBM28-208ENST00000495327 RALGAPBQ86X10 1494 aa19.15■□□□□ 0.66
RBM28-208ENST00000495327 ARHGEF10O15013 1369 aa19.14■□□□□ 0.65
RBM28-208ENST00000495327 CDK12Q9NYV4 1490 aaPredicted RBP19.14■□□□□ 0.65
RBM28-208ENST00000495327 PMFBP1Q8TBY8 1022 aa19.13■□□□□ 0.65
RBM28-208ENST00000495327 ADAMTS2O95450 1211 aa19.12■□□□□ 0.65
RBM28-208ENST00000495327 PLCH1Q4KWH8 1693 aa19.11■□□□□ 0.65
RBM28-208ENST00000495327 NUDT16Q96DE0 195 aaKnown RBP19.11■□□□□ 0.65
RBM28-208ENST00000495327 CDK19Q9BWU1 502 aa19.11■□□□□ 0.65
RBM28-208ENST00000495327 NWD2Q9ULI1 1742 aa19.11■□□□□ 0.65
RBM28-208ENST00000495327 POLR3AO14802 1390 aaPredicted RBP19.09■□□□□ 0.65
RBM28-208ENST00000495327 NBPF8Q3BBV2 869 aa19.09■□□□□ 0.65
RBM28-208ENST00000495327 FNBP4Q8N3X1 1017 aaPredicted RBP19.09■□□□□ 0.65
RBM28-208ENST00000495327 NGLY1Q96IV0 654 aa19.09■□□□□ 0.65
RBM28-208ENST00000495327 PHRF1Q9P1Y6 1649 aaKnown RBP19.08■□□□□ 0.65
RBM28-208ENST00000495327 CCDC61Q9Y6R9 512 aa19.07■□□□□ 0.64
RBM28-208ENST00000495327 SBNO2Q9Y2G9 1366 aa19.06■□□□□ 0.64
RBM28-208ENST00000495327 SLIT2O94813 1529 aa19.06■□□□□ 0.64
RBM28-208ENST00000495327 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
RBM28-208ENST00000495327 ATRNO75882 1429 aa19.06■□□□□ 0.64
RBM28-208ENST00000495327 BCL9LQ86UU0 1499 aa19.05■□□□□ 0.64
RBM28-208ENST00000495327 RXRBP28702 533 aa19.05■□□□□ 0.64
RBM28-208ENST00000495327 USP21Q9UK80 565 aa19.05■□□□□ 0.64
RBM28-208ENST00000495327 PPIP5K1Q6PFW1 1433 aa19.05■□□□□ 0.64
RBM28-208ENST00000495327 PLEKHG3A1L390 1219 aa19.04■□□□□ 0.64
RBM28-208ENST00000495327 NRAPQ86VF7 1730 aa19.04■□□□□ 0.64
RBM28-208ENST00000495327 AKAP12Q02952 1782 aa19.04■□□□□ 0.64
RBM28-208ENST00000495327 COL14A1Q05707 1796 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms