RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 C14orf93Q9H972 538 aaKnown RBP15.61■□□□□ 0.09
NELFE-213ENST00000494956 YTHDC2Q9H6S0 1430 aaKnown RBP15.6■□□□□ 0.09
NELFE-213ENST00000494956 NUTM2FA1L443 756 aa15.6■□□□□ 0.09
NELFE-213ENST00000494956 TECPR2O15040 1411 aa15.6■□□□□ 0.09
NELFE-213ENST00000494956 POTEAQ6S8J7 498 aa15.59■□□□□ 0.09
NELFE-213ENST00000494956 NUTM2BA6NNL0 878 aaPredicted RBP15.58■□□□□ 0.08
NELFE-213ENST00000494956 NUTM2EB1AL46 878 aaPredicted RBP15.58■□□□□ 0.08
NELFE-213ENST00000494956 NUTM2AQ8IVF1 878 aaPredicted RBP15.58■□□□□ 0.08
NELFE-213ENST00000494956 DCAF11Q8TEB1 546 aa15.58■□□□□ 0.08
NELFE-213ENST00000494956 ABCC11Q96J66 1382 aa15.58■□□□□ 0.08
NELFE-213ENST00000494956 LAMC1P11047 1609 aa15.57■□□□□ 0.08
NELFE-213ENST00000494956 SAFB2Q14151 953 aaKnown RBP eCLIP15.57■□□□□ 0.08
NELFE-213ENST00000494956 DHX57Q6P158 1386 aaKnown RBP15.57■□□□□ 0.08
NELFE-213ENST00000494956 CDC42BPGQ6DT37 1551 aa15.57■□□□□ 0.08
NELFE-213ENST00000494956 RGPD8O14715 1765 aaPredicted RBP15.55■□□□□ 0.08
NELFE-213ENST00000494956 SPATA31A6Q5VVP1 1343 aa15.55■□□□□ 0.08
NELFE-213ENST00000494956 ADGRB1O14514 1584 aa15.54■□□□□ 0.08
NELFE-213ENST00000494956 ESCO1Q5FWF5 840 aa15.54■□□□□ 0.08
NELFE-213ENST00000494956 FMN2Q9NZ56 1722 aa15.54■□□□□ 0.08
NELFE-213ENST00000494956 XPCQ01831 940 aaPredicted RBP15.53■□□□□ 0.08
NELFE-213ENST00000494956 MEX3CQ5U5Q3 659 aaKnown RBP15.53■□□□□ 0.08
NELFE-213ENST00000494956 LRRC59Q96AG4 307 aaKnown RBP15.53■□□□□ 0.08
NELFE-213ENST00000494956 PRAM1Q96QH2 718 aa15.53■□□□□ 0.08
NELFE-213ENST00000494956 PNPLA6Q8IY17 1366 aa15.52■□□□□ 0.08
NELFE-213ENST00000494956 SOS2Q07890 1332 aaPredicted RBP15.51■□□□□ 0.07
NELFE-213ENST00000494956 TRAK1Q9UPV9 953 aa15.51■□□□□ 0.07
NELFE-213ENST00000494956 FOXO3O43524 673 aa15.5■□□□□ 0.07
NELFE-213ENST00000494956 SIRT1Q96EB6 747 aa15.48■□□□□ 0.07
NELFE-213ENST00000494956 HIRIP3Q9BW71 556 aaPredicted RBP15.48■□□□□ 0.07
NELFE-213ENST00000494956 POGKQ9P215 609 aa15.48■□□□□ 0.07
NELFE-213ENST00000494956 DLC1Q96QB1 1528 aa15.48■□□□□ 0.07
NELFE-213ENST00000494956 PXDNQ92626 1479 aa15.47■□□□□ 0.07
NELFE-213ENST00000494956 SIN3AQ96ST3 1273 aa15.47■□□□□ 0.07
NELFE-213ENST00000494956 MINK1Q8N4C8 1332 aaPredicted RBP15.46■□□□□ 0.07
NELFE-213ENST00000494956 ADAMTS2O95450 1211 aa15.46■□□□□ 0.07
NELFE-213ENST00000494956 USP32Q8NFA0 1604 aa15.46■□□□□ 0.06
NELFE-213ENST00000494956 ARHGEF28Q8N1W1 1705 aaKnown RBP15.46■□□□□ 0.06
NELFE-213ENST00000494956 AFF2P51816 1311 aa15.45■□□□□ 0.06
NELFE-213ENST00000494956 NPHP3Q7Z494 1330 aa15.45■□□□□ 0.06
NELFE-213ENST00000494956 C8orf37Q96NL8 207 aa15.45■□□□□ 0.06
NELFE-213ENST00000494956 NBPF1Q3BBV0 1214 aa15.43■□□□□ 0.06
NELFE-213ENST00000494956 KIF1AQ12756 1690 aa15.43■□□□□ 0.06
NELFE-213ENST00000494956 COL22A1Q8NFW1 1626 aaPredicted RBP15.43■□□□□ 0.06
NELFE-213ENST00000494956 ADGRB2O60241 1585 aa15.42■□□□□ 0.06
NELFE-213ENST00000494956 PLEKHG5O94827 1062 aa15.42■□□□□ 0.06
NELFE-213ENST00000494956 ZNF772Q68DY9 489 aaPredicted RBP15.42■□□□□ 0.06
NELFE-213ENST00000494956 PMFBP1Q8TBY8 1022 aa15.42■□□□□ 0.06
NELFE-213ENST00000494956 PHF8Q9UPP1 1060 aa15.42■□□□□ 0.06
NELFE-213ENST00000494956 NEUROD1Q13562 356 aa15.41■□□□□ 0.06
NELFE-213ENST00000494956 KRT28Q7Z3Y7 464 aa15.41■□□□□ 0.06
NELFE-213ENST00000494956 STAC3Q96MF2 364 aa15.41■□□□□ 0.06
NELFE-213ENST00000494956 PRR36Q9H6K5 1346 aa15.41■□□□□ 0.06
NELFE-213ENST00000494956 KIAA1210Q9ULL0 1709 aa15.4■□□□□ 0.06
NELFE-213ENST00000494956 L3MBTL2Q969R5 705 aa15.39■□□□□ 0.05
NELFE-213ENST00000494956 NGLY1Q96IV0 654 aa15.39■□□□□ 0.05
NELFE-213ENST00000494956 MARF1Q9Y4F3 1742 aaKnown RBP15.38■□□□□ 0.05
NELFE-213ENST00000494956 SPATA31A3Q5VYP0 1347 aa15.38■□□□□ 0.05
NELFE-213ENST00000494956 WASLO00401 505 aaPredicted RBP15.37■□□□□ 0.05
NELFE-213ENST00000494956 ANKARQ7Z5J8 1434 aa15.36■□□□□ 0.05
NELFE-213ENST00000494956 RXRBP28702 533 aa15.36■□□□□ 0.05
NELFE-213ENST00000494956 CABLES1Q8TDN4 633 aa15.36■□□□□ 0.05
NELFE-213ENST00000494956 QTRT2Q9H974 415 aaKnown RBP15.36■□□□□ 0.05
NELFE-213ENST00000494956 TULP4Q9NRJ4 1543 aa15.36■□□□□ 0.05
NELFE-213ENST00000494956 TNS3Q68CZ2 1445 aa15.34■□□□□ 0.05
NELFE-213ENST00000494956 PSME1Q06323 249 aa15.34■□□□□ 0.05
NELFE-213ENST00000494956 LMOD2Q6P5Q4 547 aa15.34■□□□□ 0.05
NELFE-213ENST00000494956 USP21Q9UK80 565 aa15.34■□□□□ 0.05
NELFE-213ENST00000494956 TRPM3Q9HCF6 1732 aaPredicted RBP15.34■□□□□ 0.05
NELFE-213ENST00000494956 ABCA3Q99758 1704 aa15.33■□□□□ 0.04
NELFE-213ENST00000494956 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
NELFE-213ENST00000494956 CDK19Q9BWU1 502 aa15.32■□□□□ 0.04
NELFE-213ENST00000494956 ATP7BP35670 1465 aa15.32■□□□□ 0.04
NELFE-213ENST00000494956 TRIM26Q12899 539 aaPredicted RBP15.31■□□□□ 0.04
NELFE-213ENST00000494956 NUDT16Q96DE0 195 aaKnown RBP15.31■□□□□ 0.04
NELFE-213ENST00000494956 RGS12O14924 1447 aa15.31■□□□□ 0.04
NELFE-213ENST00000494956 SBNO1A3KN83 1393 aa15.3■□□□□ 0.04
NELFE-213ENST00000494956 ITSN1Q15811 1721 aa15.3■□□□□ 0.04
NELFE-213ENST00000494956 NBPF8Q3BBV2 869 aa15.3■□□□□ 0.04
NELFE-213ENST00000494956 BCL9LQ86UU0 1499 aa15.3■□□□□ 0.04
NELFE-213ENST00000494956 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
NELFE-213ENST00000494956 ALS2Q96Q42 1657 aa15.3■□□□□ 0.04
NELFE-213ENST00000494956 QRICH2Q9H0J4 1663 aa15.3■□□□□ 0.04
NELFE-213ENST00000494956 TOPAZ1Q8N9V7 1692 aa15.29■□□□□ 0.04
NELFE-213ENST00000494956 EIF3AQ14152 1382 aaKnown RBP15.29■□□□□ 0.04
NELFE-213ENST00000494956 RBM6P78332 1123 aaKnown RBP15.29■□□□□ 0.04
NELFE-213ENST00000494956 NGDNQ8NEJ9 315 aaKnown RBP15.29■□□□□ 0.04
NELFE-213ENST00000494956 ATRNO75882 1429 aa15.28■□□□□ 0.04
NELFE-213ENST00000494956 HAP1P54257 671 aaPredicted RBP15.28■□□□□ 0.04
NELFE-213ENST00000494956 CDK12Q9NYV4 1490 aaPredicted RBP15.27■□□□□ 0.04
NELFE-213ENST00000494956 CENPJQ9HC77 1338 aaPredicted RBP15.27■□□□□ 0.04
NELFE-213ENST00000494956 PAK3O75914 559 aaPredicted RBP15.27■□□□□ 0.04
NELFE-213ENST00000494956 TRPC5Q9UL62 973 aaPredicted RBP15.27■□□□□ 0.04
NELFE-213ENST00000494956 GPRASP1Q5JY77 1395 aa15.26■□□□□ 0.03
NELFE-213ENST00000494956 PLCH1Q4KWH8 1693 aa15.26■□□□□ 0.03
NELFE-213ENST00000494956 CABP2Q9NPB3 220 aa15.26■□□□□ 0.03
NELFE-213ENST00000494956 SLIT2O94813 1529 aa15.26■□□□□ 0.03
NELFE-213ENST00000494956 CRYBG1Q9Y4K1 1723 aa15.26■□□□□ 0.03
NELFE-213ENST00000494956 ARHGEF10O15013 1369 aa15.25■□□□□ 0.03
NELFE-213ENST00000494956 ROCK2O75116 1388 aaKnown RBP15.25■□□□□ 0.03
NELFE-213ENST00000494956 NUTM2GQ5VZR2 741 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms