RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 PLEKHH1Q9ULM0 1364 aa10.68□□□□□ -0.7
VEGFA-214ENST00000493786 SLC24A1O60721 1099 aa10.68□□□□□ -0.7
VEGFA-214ENST00000493786 ATF3P18847 181 aa10.68□□□□□ -0.7
VEGFA-214ENST00000493786 C19orf44Q9H6X5 657 aa10.68□□□□□ -0.7
VEGFA-214ENST00000493786 ARHGEF28Q8N1W1 1705 aaKnown RBP10.67□□□□□ -0.7
VEGFA-214ENST00000493786 MINK1Q8N4C8 1332 aaPredicted RBP10.67□□□□□ -0.7
VEGFA-214ENST00000493786 IQSEC2Q5JU85 1478 aa10.67□□□□□ -0.7
VEGFA-214ENST00000493786 ST20-MTHFSA0A0A6YYL1 179 aa10.66□□□□□ -0.7
VEGFA-214ENST00000493786 CADPS2Q86UW7 1296 aa10.66□□□□□ -0.7
VEGFA-214ENST00000493786 HIRIP3Q9BW71 556 aaPredicted RBP10.66□□□□□ -0.7
VEGFA-214ENST00000493786 DCCP43146 1447 aa10.66□□□□□ -0.7
VEGFA-214ENST00000493786 TOM1O60784 492 aa10.65□□□□□ -0.7
VEGFA-214ENST00000493786 EVC2Q86UK5 1308 aa10.64□□□□□ -0.71
VEGFA-214ENST00000493786 HSPA5P11021 654 aaKnown RBP10.64□□□□□ -0.71
VEGFA-214ENST00000493786 SBNO2Q9Y2G9 1366 aa10.64□□□□□ -0.71
VEGFA-214ENST00000493786 QRICH2Q9H0J4 1663 aa10.63□□□□□ -0.71
VEGFA-214ENST00000493786 UBAP1LF5GYI3 381 aa10.63□□□□□ -0.71
VEGFA-214ENST00000493786 WASLO00401 505 aaPredicted RBP10.63□□□□□ -0.71
VEGFA-214ENST00000493786 SRPK2P78362 688 aaKnown RBP10.63□□□□□ -0.71
VEGFA-214ENST00000493786 TMF1P82094 1093 aa10.63□□□□□ -0.71
VEGFA-214ENST00000493786 CDCA8Q53HL2 280 aa10.63□□□□□ -0.71
VEGFA-214ENST00000493786 CDC42BPGQ6DT37 1551 aa10.63□□□□□ -0.71
VEGFA-214ENST00000493786 NALCNQ8IZF0 1738 aa10.63□□□□□ -0.71
VEGFA-214ENST00000493786 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.62□□□□□ -0.71
VEGFA-214ENST00000493786 ADGRB2O60241 1585 aa10.62□□□□□ -0.71
VEGFA-214ENST00000493786 SCAF1Q9H7N4 1312 aaKnown RBP10.61□□□□□ -0.71
VEGFA-214ENST00000493786 CDK19Q9BWU1 502 aa10.61□□□□□ -0.71
VEGFA-214ENST00000493786 XIRP1Q702N8 1843 aaKnown RBP10.61□□□□□ -0.71
VEGFA-214ENST00000493786 NUTM2FA1L443 756 aa10.6□□□□□ -0.71
VEGFA-214ENST00000493786 TESK2Q96S53 571 aa10.6□□□□□ -0.71
VEGFA-214ENST00000493786 SLAIN2Q9P270 581 aa10.6□□□□□ -0.71
VEGFA-214ENST00000493786 ANKARQ7Z5J8 1434 aa10.59□□□□□ -0.71
VEGFA-214ENST00000493786 TULP4Q9NRJ4 1543 aa10.59□□□□□ -0.71
VEGFA-214ENST00000493786 PIP4K2BP78356 416 aa10.59□□□□□ -0.71
VEGFA-214ENST00000493786 CABP2Q9NPB3 220 aa10.59□□□□□ -0.71
VEGFA-214ENST00000493786 ATAD2Q6PL18 1390 aa10.59□□□□□ -0.71
VEGFA-214ENST00000493786 MST1RQ04912 1400 aa10.58□□□□□ -0.72
VEGFA-214ENST00000493786 C1orf167Q5SNV9 1468 aa10.58□□□□□ -0.72
VEGFA-214ENST00000493786 ESCO1Q5FWF5 840 aa10.58□□□□□ -0.72
VEGFA-214ENST00000493786 NUDT16Q96DE0 195 aaKnown RBP10.57□□□□□ -0.72
VEGFA-214ENST00000493786 PUS7Q96PZ0 661 aaKnown RBP10.57□□□□□ -0.72
VEGFA-214ENST00000493786 POLR3GLQ9BT43 218 aa10.57□□□□□ -0.72
VEGFA-214ENST00000493786 FMN2Q9NZ56 1722 aa10.57□□□□□ -0.72
VEGFA-214ENST00000493786 DISP3Q9P2K9 1392 aa10.56□□□□□ -0.72
VEGFA-214ENST00000493786 CCDC61Q9Y6R9 512 aa10.56□□□□□ -0.72
VEGFA-214ENST00000493786 ATP7BP35670 1465 aa10.55□□□□□ -0.72
VEGFA-214ENST00000493786 TMC1Q8TDI8 760 aa10.55□□□□□ -0.72
VEGFA-214ENST00000493786 PHF8Q9UPP1 1060 aa10.55□□□□□ -0.72
VEGFA-214ENST00000493786 PRR36Q9H6K5 1346 aa10.55□□□□□ -0.72
VEGFA-214ENST00000493786 NINLQ9Y2I6 1382 aa10.54□□□□□ -0.72
VEGFA-214ENST00000493786 PPIP5K1Q6PFW1 1433 aa10.54□□□□□ -0.72
VEGFA-214ENST00000493786 BRINP3Q76B58 766 aa10.54□□□□□ -0.72
VEGFA-214ENST00000493786 NGDNQ8NEJ9 315 aaKnown RBP10.54□□□□□ -0.72
VEGFA-214ENST00000493786 ORAI2Q96SN7 254 aa10.54□□□□□ -0.72
VEGFA-214ENST00000493786 PMFBP1Q8TBY8 1022 aa10.53□□□□□ -0.72
VEGFA-214ENST00000493786 FBXO41Q8TF61 875 aa10.53□□□□□ -0.72
VEGFA-214ENST00000493786 CABP1Q9NZU7 370 aa10.53□□□□□ -0.72
VEGFA-214ENST00000493786 NPHP3Q7Z494 1330 aa10.53□□□□□ -0.72
VEGFA-214ENST00000493786 ITSN1Q15811 1721 aa10.53□□□□□ -0.72
VEGFA-214ENST00000493786 PSME1Q06323 249 aa10.52□□□□□ -0.73
VEGFA-214ENST00000493786 HDGFL2Q7Z4V5 671 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-214ENST00000493786 TERF2IPQ9NYB0 399 aa10.52□□□□□ -0.73
VEGFA-214ENST00000493786 KIF1AQ12756 1690 aa10.52□□□□□ -0.73
VEGFA-214ENST00000493786 USP32Q8NFA0 1604 aa10.51□□□□□ -0.73
VEGFA-214ENST00000493786 ROBO1Q9Y6N7 1651 aa10.51□□□□□ -0.73
VEGFA-214ENST00000493786 PLEKHG3A1L390 1219 aa10.51□□□□□ -0.73
VEGFA-214ENST00000493786 FOXO3O43524 673 aa10.51□□□□□ -0.73
VEGFA-214ENST00000493786 KIF7Q2M1P5 1343 aa10.51□□□□□ -0.73
VEGFA-214ENST00000493786 ZNF692Q9BU19 519 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-214ENST00000493786 SLC12A5Q9H2X9 1139 aa10.5□□□□□ -0.73
VEGFA-214ENST00000493786 ACEP12821 1306 aa10.5□□□□□ -0.73
VEGFA-214ENST00000493786 TOPAZ1Q8N9V7 1692 aa10.5□□□□□ -0.73
VEGFA-214ENST00000493786 CCDC7Q96M83 1385 aa10.5□□□□□ -0.73
VEGFA-214ENST00000493786 KRT28Q7Z3Y7 464 aa10.49□□□□□ -0.73
VEGFA-214ENST00000493786 POLR3AO14802 1390 aaPredicted RBP10.49□□□□□ -0.73
VEGFA-214ENST00000493786 ZNF316A6NFI3 1004 aaPredicted RBP10.48□□□□□ -0.73
VEGFA-214ENST00000493786 C11orf95C9JLR9 678 aaPredicted RBP10.48□□□□□ -0.73
VEGFA-214ENST00000493786 PAK3O75914 559 aaPredicted RBP10.48□□□□□ -0.73
VEGFA-214ENST00000493786 XPCQ01831 940 aaPredicted RBP10.48□□□□□ -0.73
VEGFA-214ENST00000493786 KTN1Q86UP2 1357 aaKnown RBP10.48□□□□□ -0.73
VEGFA-214ENST00000493786 AHDC1Q5TGY3 1603 aaPredicted RBP10.47□□□□□ -0.73
VEGFA-214ENST00000493786 RGPD8O14715 1765 aaPredicted RBP10.47□□□□□ -0.73
VEGFA-214ENST00000493786 DDX17Q92841 729 aaKnown RBP10.47□□□□□ -0.73
VEGFA-214ENST00000493786 WASHC2AQ641Q2 1341 aa10.47□□□□□ -0.73
VEGFA-214ENST00000493786 BRD4O60885 1362 aaPredicted RBP10.47□□□□□ -0.73
VEGFA-214ENST00000493786 ANKRD36BQ8N2N9 1353 aa10.47□□□□□ -0.73
VEGFA-214ENST00000493786 LMOD2Q6P5Q4 547 aa10.46□□□□□ -0.73
VEGFA-214ENST00000493786 LRRC59Q96AG4 307 aaKnown RBP10.46□□□□□ -0.73
VEGFA-214ENST00000493786 SOS2Q07890 1332 aaPredicted RBP10.46□□□□□ -0.73
VEGFA-214ENST00000493786 A0A1W2PP64 1363 aa10.46□□□□□ -0.74
VEGFA-214ENST00000493786 USP6P35125 1406 aa10.46□□□□□ -0.74
VEGFA-214ENST00000493786 PHLPP1O60346 1717 aa10.46□□□□□ -0.74
VEGFA-214ENST00000493786 NHSL1Q5SYE7 1610 aa10.45□□□□□ -0.74
VEGFA-214ENST00000493786 CPSF1Q10570 1443 aaKnown RBP10.45□□□□□ -0.74
VEGFA-214ENST00000493786 EDC4Q6P2E9 1401 aaKnown RBP10.45□□□□□ -0.74
VEGFA-214ENST00000493786 SBNO1A3KN83 1393 aa10.45□□□□□ -0.74
VEGFA-214ENST00000493786 HSPA1LP34931 641 aa10.45□□□□□ -0.74
VEGFA-214ENST00000493786 PXDNQ92626 1479 aa10.44□□□□□ -0.74
VEGFA-214ENST00000493786 TNS3Q68CZ2 1445 aa10.44□□□□□ -0.74
VEGFA-214ENST00000493786 ARHGEF10O15013 1369 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms