RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 CDC42BPGQ6DT37 1551 aa16.6■□□□□ 0.25
SNRNP200-207ENST00000493271 ORAI2Q96SN7 254 aa16.6■□□□□ 0.25
SNRNP200-207ENST00000493271 LRPPRCP42704 1394 aaKnown RBP16.59■□□□□ 0.25
SNRNP200-207ENST00000493271 PPLO60437 1756 aa16.57■□□□□ 0.24
SNRNP200-207ENST00000493271 MYOM2P54296 1465 aa16.57■□□□□ 0.24
SNRNP200-207ENST00000493271 ATRNO75882 1429 aa16.57■□□□□ 0.24
SNRNP200-207ENST00000493271 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
SNRNP200-207ENST00000493271 CCDC125Q86Z20 511 aa16.56■□□□□ 0.24
SNRNP200-207ENST00000493271 TECPR2O15040 1411 aa16.54■□□□□ 0.24
SNRNP200-207ENST00000493271 ESCO1Q5FWF5 840 aa16.54■□□□□ 0.24
SNRNP200-207ENST00000493271 PPARGC1BQ86YN6 1023 aaKnown RBP16.54■□□□□ 0.24
SNRNP200-207ENST00000493271 PXDNQ92626 1479 aa16.54■□□□□ 0.24
SNRNP200-207ENST00000493271 ANKRD30BQ9BXX2 1392 aa16.52■□□□□ 0.24
SNRNP200-207ENST00000493271 CCDC144AA2RUR9 1427 aa16.52■□□□□ 0.23
SNRNP200-207ENST00000493271 BCL9LQ86UU0 1499 aa16.51■□□□□ 0.23
SNRNP200-207ENST00000493271 ABCC11Q96J66 1382 aa16.51■□□□□ 0.23
SNRNP200-207ENST00000493271 MARF1Q9Y4F3 1742 aaKnown RBP16.5■□□□□ 0.23
SNRNP200-207ENST00000493271 ZRANB1Q9UGI0 708 aa16.5■□□□□ 0.23
SNRNP200-207ENST00000493271 FOXO3O43524 673 aa16.49■□□□□ 0.23
SNRNP200-207ENST00000493271 GJD4Q96KN9 370 aaPredicted RBP16.49■□□□□ 0.23
SNRNP200-207ENST00000493271 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.49■□□□□ 0.23
SNRNP200-207ENST00000493271 KNDC1Q76NI1 1749 aa16.48■□□□□ 0.23
SNRNP200-207ENST00000493271 KIF1AQ12756 1690 aa16.48■□□□□ 0.23
SNRNP200-207ENST00000493271 SRCAPQ6ZRS2 3230 aa16.48■□□□□ 0.23
SNRNP200-207ENST00000493271 ACIN1Q9UKV3 1341 aaKnown RBP16.47■□□□□ 0.23
SNRNP200-207ENST00000493271 SPATA31E1Q6ZUB1 1445 aa16.47■□□□□ 0.23
SNRNP200-207ENST00000493271 EP400Q96L91 3159 aa16.46■□□□□ 0.23
SNRNP200-207ENST00000493271 ADGRF5Q8IZF2 1346 aa16.46■□□□□ 0.23
SNRNP200-207ENST00000493271 SIRT1Q96EB6 747 aa16.46■□□□□ 0.23
SNRNP200-207ENST00000493271 PIK3C2GO75747 1445 aa16.45■□□□□ 0.22
SNRNP200-207ENST00000493271 UNC5CLQ8IV45 518 aa16.45■□□□□ 0.22
SNRNP200-207ENST00000493271 IFT172Q9UG01 1749 aa16.45■□□□□ 0.22
SNRNP200-207ENST00000493271 SLIT2O94813 1529 aa16.45■□□□□ 0.22
SNRNP200-207ENST00000493271 SPATA31A3Q5VYP0 1347 aa16.45■□□□□ 0.22
SNRNP200-207ENST00000493271 STK26Q9P289 416 aa16.44■□□□□ 0.22
SNRNP200-207ENST00000493271 FMN2Q9NZ56 1722 aa16.44■□□□□ 0.22
SNRNP200-207ENST00000493271 WAPLQ7Z5K2 1190 aa16.43■□□□□ 0.22
SNRNP200-207ENST00000493271 BLMP54132 1417 aaPredicted RBP16.43■□□□□ 0.22
SNRNP200-207ENST00000493271 YTHDC2Q9H6S0 1430 aaKnown RBP16.43■□□□□ 0.22
SNRNP200-207ENST00000493271 XPCQ01831 940 aaPredicted RBP16.42■□□□□ 0.22
SNRNP200-207ENST00000493271 PSME1Q06323 249 aa16.42■□□□□ 0.22
SNRNP200-207ENST00000493271 RGL3Q3MIN7 710 aa16.42■□□□□ 0.22
SNRNP200-207ENST00000493271 USP32Q8NFA0 1604 aa16.41■□□□□ 0.22
SNRNP200-207ENST00000493271 RALGAPBQ86X10 1494 aa16.41■□□□□ 0.22
SNRNP200-207ENST00000493271 NUTM2FA1L443 756 aa16.4■□□□□ 0.22
SNRNP200-207ENST00000493271 KRT28Q7Z3Y7 464 aa16.4■□□□□ 0.22
SNRNP200-207ENST00000493271 MPHOSPH9Q99550 1183 aa16.4■□□□□ 0.22
SNRNP200-207ENST00000493271 PLEKHH1Q9ULM0 1364 aa16.39■□□□□ 0.21
SNRNP200-207ENST00000493271 GLI3P10071 1580 aa16.39■□□□□ 0.21
SNRNP200-207ENST00000493271 TNS3Q68CZ2 1445 aa16.39■□□□□ 0.21
SNRNP200-207ENST00000493271 TMEM132EQ6IEE7 984 aa16.39■□□□□ 0.21
SNRNP200-207ENST00000493271 SBNO1A3KN83 1393 aa16.38■□□□□ 0.21
SNRNP200-207ENST00000493271 HAP1P54257 671 aaPredicted RBP16.38■□□□□ 0.21
SNRNP200-207ENST00000493271 PHF8Q9UPP1 1060 aa16.38■□□□□ 0.21
SNRNP200-207ENST00000493271 ARHGEF10O15013 1369 aa16.38■□□□□ 0.21
SNRNP200-207ENST00000493271 DHX57Q6P158 1386 aaKnown RBP16.38■□□□□ 0.21
SNRNP200-207ENST00000493271 SF3B2Q13435 895 aaKnown RBP16.37■□□□□ 0.21
SNRNP200-207ENST00000493271 VPS72Q15906 364 aa16.37■□□□□ 0.21
SNRNP200-207ENST00000493271 C14orf93Q9H972 538 aaKnown RBP16.37■□□□□ 0.21
SNRNP200-207ENST00000493271 NWD2Q9ULI1 1742 aa16.36■□□□□ 0.21
SNRNP200-207ENST00000493271 NRXN1Q9ULB1 1477 aa16.36■□□□□ 0.21
SNRNP200-207ENST00000493271 ONECUT3O60422 494 aaPredicted RBP16.35■□□□□ 0.21
SNRNP200-207ENST00000493271 ANKARQ7Z5J8 1434 aa16.35■□□□□ 0.21
SNRNP200-207ENST00000493271 DLC1Q96QB1 1528 aa16.34■□□□□ 0.21
SNRNP200-207ENST00000493271 SEPT12Q8IYM1 358 aa16.33■□□□□ 0.2
SNRNP200-207ENST00000493271 EIF3AQ14152 1382 aaKnown RBP16.32■□□□□ 0.2
SNRNP200-207ENST00000493271 PLCH1Q4KWH8 1693 aa16.31■□□□□ 0.2
SNRNP200-207ENST00000493271 KRT27Q7Z3Y8 459 aa16.31■□□□□ 0.2
SNRNP200-207ENST00000493271 ADGRB2O60241 1585 aa16.3■□□□□ 0.2
SNRNP200-207ENST00000493271 PRAM1Q96QH2 718 aa16.3■□□□□ 0.2
SNRNP200-207ENST00000493271 CCDC9Q9Y3X0 531 aaKnown RBP16.3■□□□□ 0.2
SNRNP200-207ENST00000493271 BRWD3Q6RI45 1802 aa16.29■□□□□ 0.2
SNRNP200-207ENST00000493271 ABCA3Q99758 1704 aa16.29■□□□□ 0.2
SNRNP200-207ENST00000493271 CFAP70Q5T0N1 1121 aa16.29■□□□□ 0.2
SNRNP200-207ENST00000493271 RGPD8O14715 1765 aaPredicted RBP16.28■□□□□ 0.2
SNRNP200-207ENST00000493271 LMOD2Q6P5Q4 547 aa16.28■□□□□ 0.2
SNRNP200-207ENST00000493271 CABLES1Q8TDN4 633 aa16.28■□□□□ 0.2
SNRNP200-207ENST00000493271 POGKQ9P215 609 aa16.28■□□□□ 0.2
SNRNP200-207ENST00000493271 BAG6P46379 1132 aa16.27■□□□□ 0.2
SNRNP200-207ENST00000493271 DEFB132Q7Z7B7 95 aa16.27■□□□□ 0.2
SNRNP200-207ENST00000493271 LRP5O75197 1615 aa16.27■□□□□ 0.19
SNRNP200-207ENST00000493271 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
SNRNP200-207ENST00000493271 STAC3Q96MF2 364 aa16.26■□□□□ 0.19
SNRNP200-207ENST00000493271 FAM83GA6ND36 823 aa16.25■□□□□ 0.19
SNRNP200-207ENST00000493271 COL14A1Q05707 1796 aaKnown RBP16.24■□□□□ 0.19
SNRNP200-207ENST00000493271 SAFB2Q14151 953 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNRNP200-207ENST00000493271 NRAPQ86VF7 1730 aa16.24■□□□□ 0.19
SNRNP200-207ENST00000493271 TRPM3Q9HCF6 1732 aaPredicted RBP16.24■□□□□ 0.19
SNRNP200-207ENST00000493271 ADGRB1O14514 1584 aa16.23■□□□□ 0.19
SNRNP200-207ENST00000493271 A0A0G2JS52 829 aa16.23■□□□□ 0.19
SNRNP200-207ENST00000493271 MYT1Q01538 1121 aa16.23■□□□□ 0.19
SNRNP200-207ENST00000493271 PMFBP1Q8TBY8 1022 aa16.23■□□□□ 0.19
SNRNP200-207ENST00000493271 BTG4Q9NY30 223 aa16.23■□□□□ 0.19
SNRNP200-207ENST00000493271 TULP4Q9NRJ4 1543 aa16.23■□□□□ 0.19
SNRNP200-207ENST00000493271 ALS2Q96Q42 1657 aa16.22■□□□□ 0.19
SNRNP200-207ENST00000493271 FAM98CQ17RN3 349 aaKnown RBP16.2■□□□□ 0.18
SNRNP200-207ENST00000493271 RGPD1P0DJD0 1748 aa16.19■□□□□ 0.18
SNRNP200-207ENST00000493271 WASLO00401 505 aaPredicted RBP16.19■□□□□ 0.18
SNRNP200-207ENST00000493271 PLEKHG5O94827 1062 aa16.19■□□□□ 0.18
SNRNP200-207ENST00000493271 TRAK1Q9UPV9 953 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms