RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 TECPR2O15040 1411 aa12.38□□□□□ -0.43
SMARCC1-208ENST00000492896 ANKRD26Q9UPS8 1709 aa12.38□□□□□ -0.43
SMARCC1-208ENST00000492896 PRAM1Q96QH2 718 aa12.38□□□□□ -0.43
SMARCC1-208ENST00000492896 POGKQ9P215 609 aa12.38□□□□□ -0.43
SMARCC1-208ENST00000492896 ABCC11Q96J66 1382 aa12.38□□□□□ -0.43
SMARCC1-208ENST00000492896 NSD3Q9BZ95 1437 aa12.37□□□□□ -0.43
SMARCC1-208ENST00000492896 ATAD2Q6PL18 1390 aa12.37□□□□□ -0.43
SMARCC1-208ENST00000492896 ADAMTS13Q76LX8 1427 aa12.37□□□□□ -0.43
SMARCC1-208ENST00000492896 METP08581 1390 aa12.36□□□□□ -0.43
SMARCC1-208ENST00000492896 ANKRD36BQ8N2N9 1353 aa12.36□□□□□ -0.43
SMARCC1-208ENST00000492896 SAFB2Q14151 953 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMARCC1-208ENST00000492896 PLPPR3Q6T4P5 718 aa12.36□□□□□ -0.43
SMARCC1-208ENST00000492896 PNISRQ8TF01 805 aaKnown RBP12.36□□□□□ -0.43
SMARCC1-208ENST00000492896 KIF20BQ96Q89 1820 aa12.36□□□□□ -0.43
SMARCC1-208ENST00000492896 FAM135BQ49AJ0 1406 aa12.36□□□□□ -0.43
SMARCC1-208ENST00000492896 SETD1BQ9UPS6 1966 aaKnown RBP12.36□□□□□ -0.43
SMARCC1-208ENST00000492896 ZBED9Q6R2W3 1325 aa12.36□□□□□ -0.43
SMARCC1-208ENST00000492896 MINK1Q8N4C8 1332 aaPredicted RBP12.36□□□□□ -0.43
SMARCC1-208ENST00000492896 ADGRB2O60241 1585 aa12.35□□□□□ -0.43
SMARCC1-208ENST00000492896 MED14O60244 1454 aa12.34□□□□□ -0.43
SMARCC1-208ENST00000492896 BCANQ96GW7 911 aa12.34□□□□□ -0.43
SMARCC1-208ENST00000492896 EID1Q9Y6B2 187 aa12.34□□□□□ -0.43
SMARCC1-208ENST00000492896 ITSN1Q15811 1721 aa12.34□□□□□ -0.43
SMARCC1-208ENST00000492896 SRPK2P78362 688 aaKnown RBP12.33□□□□□ -0.44
SMARCC1-208ENST00000492896 CARD14Q9BXL6 1004 aa12.33□□□□□ -0.44
SMARCC1-208ENST00000492896 SLC12A5Q9H2X9 1139 aa12.33□□□□□ -0.44
SMARCC1-208ENST00000492896 CABP2Q9NPB3 220 aa12.33□□□□□ -0.44
SMARCC1-208ENST00000492896 INSRP06213 1382 aa12.32□□□□□ -0.44
SMARCC1-208ENST00000492896 PLEKHH1Q9ULM0 1364 aa12.32□□□□□ -0.44
SMARCC1-208ENST00000492896 XRN1Q8IZH2 1706 aaKnown RBP12.32□□□□□ -0.44
SMARCC1-208ENST00000492896 PPP2R1AP30153 589 aa12.32□□□□□ -0.44
SMARCC1-208ENST00000492896 TXNDC2Q86VQ3 553 aa12.32□□□□□ -0.44
SMARCC1-208ENST00000492896 THEMISQ8N1K5 641 aaPredicted RBP12.32□□□□□ -0.44
SMARCC1-208ENST00000492896 NSD2O96028 1365 aa12.31□□□□□ -0.44
SMARCC1-208ENST00000492896 AKAP12Q02952 1782 aa12.31□□□□□ -0.44
SMARCC1-208ENST00000492896 LTKP29376 864 aa12.31□□□□□ -0.44
SMARCC1-208ENST00000492896 SIRT1Q96EB6 747 aa12.31□□□□□ -0.44
SMARCC1-208ENST00000492896 ATP7BP35670 1465 aa12.31□□□□□ -0.44
SMARCC1-208ENST00000492896 MON2Q7Z3U7 1717 aa12.31□□□□□ -0.44
SMARCC1-208ENST00000492896 BLMP54132 1417 aaPredicted RBP12.3□□□□□ -0.44
SMARCC1-208ENST00000492896 TOPAZ1Q8N9V7 1692 aa12.3□□□□□ -0.44
SMARCC1-208ENST00000492896 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.3□□□□□ -0.44
SMARCC1-208ENST00000492896 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
SMARCC1-208ENST00000492896 CD163L1Q9NR16 1453 aa12.29□□□□□ -0.44
SMARCC1-208ENST00000492896 WAPLQ7Z5K2 1190 aa12.29□□□□□ -0.44
SMARCC1-208ENST00000492896 CDK19Q9BWU1 502 aa12.29□□□□□ -0.44
SMARCC1-208ENST00000492896 CGNL1Q0VF96 1302 aa12.29□□□□□ -0.44
SMARCC1-208ENST00000492896 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
SMARCC1-208ENST00000492896 CDC42BPGQ6DT37 1551 aa12.28□□□□□ -0.44
SMARCC1-208ENST00000492896 SHPRHQ149N8 1683 aa12.28□□□□□ -0.44
SMARCC1-208ENST00000492896 PTPRUQ92729 1446 aa12.28□□□□□ -0.44
SMARCC1-208ENST00000492896 TERF2IPQ9NYB0 399 aa12.27□□□□□ -0.45
SMARCC1-208ENST00000492896 ROBO2Q9HCK4 1378 aa12.27□□□□□ -0.45
SMARCC1-208ENST00000492896 CHD2O14647 1828 aaKnown RBP12.26□□□□□ -0.45
SMARCC1-208ENST00000492896 HDGFL2Q7Z4V5 671 aaPredicted RBP12.26□□□□□ -0.45
SMARCC1-208ENST00000492896 TBX22Q9Y458 520 aa12.26□□□□□ -0.45
SMARCC1-208ENST00000492896 WASLO00401 505 aaPredicted RBP12.25□□□□□ -0.45
SMARCC1-208ENST00000492896 WDR43Q15061 677 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMARCC1-208ENST00000492896 MORC1Q86VD1 984 aa12.25□□□□□ -0.45
SMARCC1-208ENST00000492896 PIK3R4Q99570 1358 aa12.25□□□□□ -0.45
SMARCC1-208ENST00000492896 POLR3AO14802 1390 aaPredicted RBP12.24□□□□□ -0.45
SMARCC1-208ENST00000492896 PPIP5K1Q6PFW1 1433 aa12.24□□□□□ -0.45
SMARCC1-208ENST00000492896 SMG6Q86US8 1419 aaKnown RBP12.24□□□□□ -0.45
SMARCC1-208ENST00000492896 SLC26A8Q96RN1 970 aa12.24□□□□□ -0.45
SMARCC1-208ENST00000492896 NRKQ7Z2Y5 1582 aa12.23□□□□□ -0.45
SMARCC1-208ENST00000492896 NEFLP07196 543 aa12.23□□□□□ -0.45
SMARCC1-208ENST00000492896 RGPD8O14715 1765 aaPredicted RBP12.21□□□□□ -0.45
SMARCC1-208ENST00000492896 FMN2Q9NZ56 1722 aa12.21□□□□□ -0.45
SMARCC1-208ENST00000492896 CABP1Q9NZU7 370 aa12.21□□□□□ -0.45
SMARCC1-208ENST00000492896 CPSF1Q10570 1443 aaKnown RBP12.2□□□□□ -0.46
SMARCC1-208ENST00000492896 EDC4Q6P2E9 1401 aaKnown RBP12.2□□□□□ -0.46
SMARCC1-208ENST00000492896 NALCNQ8IZF0 1738 aa12.2□□□□□ -0.46
SMARCC1-208ENST00000492896 ANKLE2Q86XL3 938 aa12.2□□□□□ -0.46
SMARCC1-208ENST00000492896 AMOTL2Q9Y2J4 779 aa12.2□□□□□ -0.46
SMARCC1-208ENST00000492896 NUDT16Q96DE0 195 aaKnown RBP12.19□□□□□ -0.46
SMARCC1-208ENST00000492896 NUDCQ9Y266 331 aa12.19□□□□□ -0.46
SMARCC1-208ENST00000492896 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
SMARCC1-208ENST00000492896 MAP2P11137 1827 aaKnown RBP12.18□□□□□ -0.46
SMARCC1-208ENST00000492896 CFAP53Q96M91 514 aa12.18□□□□□ -0.46
SMARCC1-208ENST00000492896 ADAMTS8Q9UP79 889 aa12.18□□□□□ -0.46
SMARCC1-208ENST00000492896 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
SMARCC1-208ENST00000492896 NPHP4O75161 1426 aaPredicted RBP12.18□□□□□ -0.46
SMARCC1-208ENST00000492896 NWD1Q149M9 1564 aa12.18□□□□□ -0.46
SMARCC1-208ENST00000492896 PRR36Q9H6K5 1346 aa12.17□□□□□ -0.46
SMARCC1-208ENST00000492896 TNNT2P45379 298 aaPredicted RBP12.17□□□□□ -0.46
SMARCC1-208ENST00000492896 PDE3BQ13370 1112 aa12.17□□□□□ -0.46
SMARCC1-208ENST00000492896 COL3A1P02461 1466 aaPredicted RBP12.16□□□□□ -0.46
SMARCC1-208ENST00000492896 NKTRP30414 1462 aaKnown RBP12.16□□□□□ -0.46
SMARCC1-208ENST00000492896 SENP3-EIF4A1A0A087X0R7 540 aa12.16□□□□□ -0.46
SMARCC1-208ENST00000492896 FYB1O15117 783 aa12.16□□□□□ -0.46
SMARCC1-208ENST00000492896 FKBP8Q14318 412 aa12.16□□□□□ -0.46
SMARCC1-208ENST00000492896 GGNBP2Q9H3C7 697 aa12.16□□□□□ -0.46
SMARCC1-208ENST00000492896 ANKARQ7Z5J8 1434 aa12.15□□□□□ -0.46
SMARCC1-208ENST00000492896 MTHFSP49914 203 aa12.15□□□□□ -0.46
SMARCC1-208ENST00000492896 KCNA6P17658 529 aa12.13□□□□□ -0.47
SMARCC1-208ENST00000492896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMARCC1-208ENST00000492896 ZNF692Q9BU19 519 aaPredicted RBP12.13□□□□□ -0.47
SMARCC1-208ENST00000492896 SALL2Q9Y467 1007 aaPredicted RBP12.13□□□□□ -0.47
SMARCC1-208ENST00000492896 IQSEC2Q5JU85 1478 aa12.13□□□□□ -0.47
SMARCC1-208ENST00000492896 USP6P35125 1406 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms