RNA–Protein interactions for RNA: ENST00000491149.5

PSMD2-217, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 895 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-217	ENST00000491149	ROBO2	Q9HCK4	1378 aa		14.06	□□□□□ -0.16
PSMD2-217	ENST00000491149	SOS2	Q07890	1332 aa	Predicted RBP	14.04	□□□□□ -0.16
PSMD2-217	ENST00000491149	LAMC1	P11047	1609 aa		14.04	□□□□□ -0.16
PSMD2-217	ENST00000491149	USP21	Q9UK80	565 aa		14.03	□□□□□ -0.16
PSMD2-217	ENST00000491149	PTCH1	Q13635	1447 aa		14.01	□□□□□ -0.17
PSMD2-217	ENST00000491149	VGF	O15240	615 aa	Predicted RBP	14	□□□□□ -0.17
PSMD2-217	ENST00000491149	XPC	Q01831	940 aa	Predicted RBP	14	□□□□□ -0.17
PSMD2-217	ENST00000491149	NAIP	Q13075	1403 aa		13.99	□□□□□ -0.17
PSMD2-217	ENST00000491149	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.99	□□□□□ -0.17
PSMD2-217	ENST00000491149	TRPC5	Q9UL62	973 aa	Predicted RBP	13.99	□□□□□ -0.17
PSMD2-217	ENST00000491149	ATRN	O75882	1429 aa		13.98	□□□□□ -0.17
PSMD2-217	ENST00000491149	ATAD2	Q6PL18	1390 aa		13.98	□□□□□ -0.17
PSMD2-217	ENST00000491149	ESCO1	Q5FWF5	840 aa		13.98	□□□□□ -0.17
PSMD2-217	ENST00000491149	PPL	O60437	1756 aa		13.98	□□□□□ -0.17
PSMD2-217	ENST00000491149	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.97	□□□□□ -0.17
PSMD2-217	ENST00000491149	NUTM2F	A1L443	756 aa		13.97	□□□□□ -0.17
PSMD2-217	ENST00000491149	MYOM2	P54296	1465 aa		13.96	□□□□□ -0.17
PSMD2-217	ENST00000491149	RPGRIP1L	Q68CZ1	1315 aa		13.95	□□□□□ -0.18
PSMD2-217	ENST00000491149	BCL9L	Q86UU0	1499 aa		13.95	□□□□□ -0.18
PSMD2-217	ENST00000491149	PXDN	Q92626	1479 aa		13.95	□□□□□ -0.18
PSMD2-217	ENST00000491149	FOXO3	O43524	673 aa		13.95	□□□□□ -0.18
PSMD2-217	ENST00000491149	WAPL	Q7Z5K2	1190 aa		13.95	□□□□□ -0.18
PSMD2-217	ENST00000491149	STK26	Q9P289	416 aa		13.95	□□□□□ -0.18
PSMD2-217	ENST00000491149	HFM1	A2PYH4	1435 aa		13.95	□□□□□ -0.18
PSMD2-217	ENST00000491149	PRAG1	Q86YV5	1406 aa		13.95	□□□□□ -0.18
PSMD2-217	ENST00000491149	ADGRF5	Q8IZF2	1346 aa		13.94	□□□□□ -0.18
PSMD2-217	ENST00000491149	RRBP1	Q9P2E9	1410 aa	Known RBP	13.94	□□□□□ -0.18
PSMD2-217	ENST00000491149	MARF1	Q9Y4F3	1742 aa	Known RBP	13.94	□□□□□ -0.18
PSMD2-217	ENST00000491149	NPHP3	Q7Z494	1330 aa		13.92	□□□□□ -0.18
PSMD2-217	ENST00000491149	CDC42BPG	Q6DT37	1551 aa		13.92	□□□□□ -0.18
PSMD2-217	ENST00000491149	PLEKHH1	Q9ULM0	1364 aa		13.92	□□□□□ -0.18
PSMD2-217	ENST00000491149	RGL3	Q3MIN7	710 aa		13.91	□□□□□ -0.18
PSMD2-217	ENST00000491149	TMEM132E	Q6IEE7	984 aa		13.91	□□□□□ -0.18
PSMD2-217	ENST00000491149	GJD4	Q96KN9	370 aa	Predicted RBP	13.91	□□□□□ -0.18
PSMD2-217	ENST00000491149	ZRANB1	Q9UGI0	708 aa		13.91	□□□□□ -0.18
PSMD2-217	ENST00000491149	SRCAP	Q6ZRS2	3230 aa		13.9	□□□□□ -0.18
PSMD2-217	ENST00000491149	EP400	Q96L91	3159 aa		13.88	□□□□□ -0.19
PSMD2-217	ENST00000491149	PLEKHG5	O94827	1062 aa		13.88	□□□□□ -0.19
PSMD2-217	ENST00000491149	GLI3	P10071	1580 aa		13.88	□□□□□ -0.19
PSMD2-217	ENST00000491149	BRWD3	Q6RI45	1802 aa		13.87	□□□□□ -0.19
PSMD2-217	ENST00000491149	LRPPRC	P42704	1394 aa	Known RBP	13.87	□□□□□ -0.19
PSMD2-217	ENST00000491149	RGPD8	O14715	1765 aa	Predicted RBP	13.87	□□□□□ -0.19
PSMD2-217	ENST00000491149	SPATA31A3	Q5VYP0	1347 aa		13.87	□□□□□ -0.19
PSMD2-217	ENST00000491149	RALGAPB	Q86X10	1494 aa		13.87	□□□□□ -0.19
PSMD2-217	ENST00000491149	KRT28	Q7Z3Y7	464 aa		13.86	□□□□□ -0.19
PSMD2-217	ENST00000491149	UNC5CL	Q8IV45	518 aa		13.86	□□□□□ -0.19
PSMD2-217	ENST00000491149	CABLES1	Q8TDN4	633 aa		13.86	□□□□□ -0.19
PSMD2-217	ENST00000491149	TECPR2	O15040	1411 aa		13.86	□□□□□ -0.19
PSMD2-217	ENST00000491149	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.86	□□□□□ -0.19
PSMD2-217	ENST00000491149	FMN2	Q9NZ56	1722 aa		13.86	□□□□□ -0.19
PSMD2-217	ENST00000491149	IFT172	Q9UG01	1749 aa		13.86	□□□□□ -0.19
PSMD2-217	ENST00000491149	SLIT2	O94813	1529 aa		13.85	□□□□□ -0.19
PSMD2-217	ENST00000491149	SPATA31E1	Q6ZUB1	1445 aa		13.85	□□□□□ -0.19
PSMD2-217	ENST00000491149	DEFB132	Q7Z7B7	95 aa		13.85	□□□□□ -0.19
PSMD2-217	ENST00000491149	CCDC125	Q86Z20	511 aa		13.85	□□□□□ -0.19
PSMD2-217	ENST00000491149	ABCC11	Q96J66	1382 aa		13.84	□□□□□ -0.19
PSMD2-217	ENST00000491149	KNDC1	Q76NI1	1749 aa		13.84	□□□□□ -0.19
PSMD2-217	ENST00000491149	CCDC144A	A2RUR9	1427 aa		13.83	□□□□□ -0.2
PSMD2-217	ENST00000491149	USP32	Q8NFA0	1604 aa		13.82	□□□□□ -0.2
PSMD2-217	ENST00000491149	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.82	□□□□□ -0.2
PSMD2-217	ENST00000491149	SEPT12	Q8IYM1	358 aa		13.82	□□□□□ -0.2
PSMD2-217	ENST00000491149	KIF1A	Q12756	1690 aa		13.82	□□□□□ -0.2
PSMD2-217	ENST00000491149	MPHOSPH9	Q99550	1183 aa		13.81	□□□□□ -0.2
PSMD2-217	ENST00000491149	ANKRD30B	Q9BXX2	1392 aa		13.81	□□□□□ -0.2
PSMD2-217	ENST00000491149	PIK3C2G	O75747	1445 aa		13.81	□□□□□ -0.2
PSMD2-217	ENST00000491149	BLM	P54132	1417 aa	Predicted RBP	13.81	□□□□□ -0.2
PSMD2-217	ENST00000491149	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
PSMD2-217	ENST00000491149	PHF8	Q9UPP1	1060 aa		13.8	□□□□□ -0.2
PSMD2-217	ENST00000491149	PLCH1	Q4KWH8	1693 aa		13.79	□□□□□ -0.2
PSMD2-217	ENST00000491149	HAP1	P54257	671 aa	Predicted RBP	13.79	□□□□□ -0.2
PSMD2-217	ENST00000491149	CFAP70	Q5T0N1	1121 aa		13.79	□□□□□ -0.2
PSMD2-217	ENST00000491149	LMOD2	Q6P5Q4	547 aa		13.79	□□□□□ -0.2
PSMD2-217	ENST00000491149	CCDC9	Q9Y3X0	531 aa	Known RBP	13.79	□□□□□ -0.2
PSMD2-217	ENST00000491149	TNS3	Q68CZ2	1445 aa		13.79	□□□□□ -0.2
PSMD2-217	ENST00000491149	FAM83G	A6ND36	823 aa		13.78	□□□□□ -0.2
PSMD2-217	ENST00000491149	VPS72	Q15906	364 aa		13.78	□□□□□ -0.2
PSMD2-217	ENST00000491149	C14orf93	Q9H972	538 aa	Known RBP	13.78	□□□□□ -0.2
PSMD2-217	ENST00000491149	ABCA3	Q99758	1704 aa		13.78	□□□□□ -0.2
PSMD2-217	ENST00000491149	PSME1	Q06323	249 aa		13.77	□□□□□ -0.21
PSMD2-217	ENST00000491149	PMFBP1	Q8TBY8	1022 aa		13.77	□□□□□ -0.21
PSMD2-217	ENST00000491149	SIRT1	Q96EB6	747 aa		13.77	□□□□□ -0.21
PSMD2-217	ENST00000491149	ONECUT3	O60422	494 aa	Predicted RBP	13.76	□□□□□ -0.21
PSMD2-217	ENST00000491149	PRAM1	Q96QH2	718 aa		13.76	□□□□□ -0.21
PSMD2-217	ENST00000491149	NRXN1	Q9ULB1	1477 aa		13.75	□□□□□ -0.21
PSMD2-217	ENST00000491149	SF3B2	Q13435	895 aa	Known RBP	13.75	□□□□□ -0.21
PSMD2-217	ENST00000491149	KRT27	Q7Z3Y8	459 aa		13.75	□□□□□ -0.21
PSMD2-217	ENST00000491149	NWD2	Q9ULI1	1742 aa		13.75	□□□□□ -0.21
PSMD2-217	ENST00000491149	SBNO1	A3KN83	1393 aa		13.74	□□□□□ -0.21
PSMD2-217	ENST00000491149	DHX57	Q6P158	1386 aa	Known RBP	13.74	□□□□□ -0.21
PSMD2-217	ENST00000491149	PSD	A5PKW4	1024 aa	Predicted RBP	13.74	□□□□□ -0.21
PSMD2-217	ENST00000491149		A0A0G2JS52	829 aa		13.73	□□□□□ -0.21
PSMD2-217	ENST00000491149	MYT1	Q01538	1121 aa		13.73	□□□□□ -0.21
PSMD2-217	ENST00000491149	FAM98C	Q17RN3	349 aa	Known RBP	13.73	□□□□□ -0.21
PSMD2-217	ENST00000491149	FAM182B	Q5T319	152 aa		13.73	□□□□□ -0.21
PSMD2-217	ENST00000491149	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMD2-217	ENST00000491149	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.72	□□□□□ -0.21
PSMD2-217	ENST00000491149	NRAP	Q86VF7	1730 aa		13.72	□□□□□ -0.21
PSMD2-217	ENST00000491149	ARHGEF10	O15013	1369 aa		13.71	□□□□□ -0.21
PSMD2-217	ENST00000491149	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMD2-217	ENST00000491149	BTG4	Q9NY30	223 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms