RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 PLEKHH1Q9ULM0 1364 aa22.47■■□□□ 1.19
TRA2A-208ENST00000490942 TOM1O60784 492 aa22.46■■□□□ 1.19
TRA2A-208ENST00000490942 RBM33Q96EV2 1170 aaKnown RBP22.45■■□□□ 1.18
TRA2A-208ENST00000490942 CDC42BPGQ6DT37 1551 aa22.45■■□□□ 1.18
TRA2A-208ENST00000490942 ADGRB2O60241 1585 aa22.44■■□□□ 1.18
TRA2A-208ENST00000490942 ATF3P18847 181 aa22.44■■□□□ 1.18
TRA2A-208ENST00000490942 NALCNQ8IZF0 1738 aa22.44■■□□□ 1.18
TRA2A-208ENST00000490942 CENPJQ9HC77 1338 aaPredicted RBP22.43■■□□□ 1.18
TRA2A-208ENST00000490942 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.43■■□□□ 1.18
TRA2A-208ENST00000490942 SBNO2Q9Y2G9 1366 aa22.42■■□□□ 1.18
TRA2A-208ENST00000490942 SLC24A1O60721 1099 aa22.41■■□□□ 1.18
TRA2A-208ENST00000490942 UBAP1LF5GYI3 381 aa22.39■■□□□ 1.17
TRA2A-208ENST00000490942 FBXO41Q8TF61 875 aa22.38■■□□□ 1.17
TRA2A-208ENST00000490942 SLAIN2Q9P270 581 aa22.37■■□□□ 1.17
TRA2A-208ENST00000490942 ZEB1P37275 1124 aaPredicted RBP22.36■■□□□ 1.17
TRA2A-208ENST00000490942 MST1RQ04912 1400 aa22.36■■□□□ 1.17
TRA2A-208ENST00000490942 USP47Q96K76 1375 aa22.36■■□□□ 1.17
TRA2A-208ENST00000490942 SAFB2Q14151 953 aaKnown RBP eCLIP22.35■■□□□ 1.171e-8■■□□□ 12.9
TRA2A-208ENST00000490942 ANKARQ7Z5J8 1434 aa22.34■■□□□ 1.17
TRA2A-208ENST00000490942 WASLO00401 505 aaPredicted RBP22.34■■□□□ 1.17
TRA2A-208ENST00000490942 MINK1Q8N4C8 1332 aaPredicted RBP22.33■■□□□ 1.17
TRA2A-208ENST00000490942 QRICH2Q9H0J4 1663 aa22.33■■□□□ 1.16
TRA2A-208ENST00000490942 FMN2Q9NZ56 1722 aa22.31■■□□□ 1.16
TRA2A-208ENST00000490942 C1orf167Q5SNV9 1468 aa22.31■■□□□ 1.16
TRA2A-208ENST00000490942 ST20-MTHFSA0A0A6YYL1 179 aa22.29■■□□□ 1.16
TRA2A-208ENST00000490942 EIF4G2P78344 907 aaKnown RBP eCLIP22.29■■□□□ 1.16
TRA2A-208ENST00000490942 TULP4Q9NRJ4 1543 aa22.29■■□□□ 1.16
TRA2A-208ENST00000490942 EVC2Q86UK5 1308 aa22.29■■□□□ 1.16
TRA2A-208ENST00000490942 PUS7Q96PZ0 661 aaKnown RBP22.28■■□□□ 1.16
TRA2A-208ENST00000490942 TESK2Q96S53 571 aa22.28■■□□□ 1.16
TRA2A-208ENST00000490942 HIRIP3Q9BW71 556 aaPredicted RBP22.28■■□□□ 1.16
TRA2A-208ENST00000490942 CDK19Q9BWU1 502 aa22.26■■□□□ 1.15
TRA2A-208ENST00000490942 BRINP3Q76B58 766 aa22.24■■□□□ 1.15
TRA2A-208ENST00000490942 PIP4K2BP78356 416 aa22.23■■□□□ 1.15
TRA2A-208ENST00000490942 ROBO1Q9Y6N7 1651 aa22.23■■□□□ 1.15
TRA2A-208ENST00000490942 ATP7BP35670 1465 aa22.22■■□□□ 1.15
TRA2A-208ENST00000490942 CCDC61Q9Y6R9 512 aa22.22■■□□□ 1.15
TRA2A-208ENST00000490942 USP32Q8NFA0 1604 aa22.21■■□□□ 1.15
TRA2A-208ENST00000490942 SRPK2P78362 688 aaKnown RBP22.21■■□□□ 1.15
TRA2A-208ENST00000490942 NUDT16Q96DE0 195 aaKnown RBP22.21■■□□□ 1.15
TRA2A-208ENST00000490942 PRR36Q9H6K5 1346 aa22.21■■□□□ 1.15
TRA2A-208ENST00000490942 ATAD2Q6PL18 1390 aa22.21■■□□□ 1.15
TRA2A-208ENST00000490942 KIF1AQ12756 1690 aa22.2■■□□□ 1.15
TRA2A-208ENST00000490942 TMF1P82094 1093 aa22.2■■□□□ 1.14
TRA2A-208ENST00000490942 CDCA8Q53HL2 280 aa22.2■■□□□ 1.14
TRA2A-208ENST00000490942 ESCO1Q5FWF5 840 aa22.2■■□□□ 1.14
TRA2A-208ENST00000490942 ORAI2Q96SN7 254 aa22.19■■□□□ 1.14
TRA2A-208ENST00000490942 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
TRA2A-208ENST00000490942 AHDC1Q5TGY3 1603 aaPredicted RBP22.19■■□□□ 1.14
TRA2A-208ENST00000490942 HSPA5P11021 654 aaKnown RBP22.18■■□□□ 1.14
TRA2A-208ENST00000490942 PHF8Q9UPP1 1060 aa22.18■■□□□ 1.14
TRA2A-208ENST00000490942 ITSN1Q15811 1721 aa22.17■■□□□ 1.14
TRA2A-208ENST00000490942 CABP2Q9NPB3 220 aa22.17■■□□□ 1.14
TRA2A-208ENST00000490942 NPHP3Q7Z494 1330 aa22.16■■□□□ 1.14
TRA2A-208ENST00000490942 PLEKHG3A1L390 1219 aa22.16■■□□□ 1.14
TRA2A-208ENST00000490942 NUTM2FA1L443 756 aa22.16■■□□□ 1.14
TRA2A-208ENST00000490942 NINLQ9Y2I6 1382 aa22.15■■□□□ 1.14
TRA2A-208ENST00000490942 TOPAZ1Q8N9V7 1692 aa22.15■■□□□ 1.14
TRA2A-208ENST00000490942 NHSL1Q5SYE7 1610 aa22.15■■□□□ 1.14
TRA2A-208ENST00000490942 POLR3AO14802 1390 aaPredicted RBP22.12■■□□□ 1.13
TRA2A-208ENST00000490942 SOS2Q07890 1332 aaPredicted RBP22.12■■□□□ 1.13
TRA2A-208ENST00000490942 PPIP5K1Q6PFW1 1433 aa22.12■■□□□ 1.13
TRA2A-208ENST00000490942 RGPD8O14715 1765 aaPredicted RBP22.12■■□□□ 1.13
TRA2A-208ENST00000490942 DISP3Q9P2K9 1392 aa22.12■■□□□ 1.13
TRA2A-208ENST00000490942 BRD4O60885 1362 aaPredicted RBP22.1■■□□□ 1.13
TRA2A-208ENST00000490942 FOXO3O43524 673 aa22.09■■□□□ 1.13
TRA2A-208ENST00000490942 HSPA1LP34931 641 aa22.09■■□□□ 1.13
TRA2A-208ENST00000490942 ILDR1Q86SU0 546 aaPredicted RBP22.09■■□□□ 1.13
TRA2A-208ENST00000490942 COL16A1Q07092 1604 aaPredicted RBP22.08■■□□□ 1.13
TRA2A-208ENST00000490942 PXDNQ92626 1479 aa22.08■■□□□ 1.12
TRA2A-208ENST00000490942 PSME1Q06323 249 aa22.07■■□□□ 1.12
TRA2A-208ENST00000490942 NGDNQ8NEJ9 315 aaKnown RBP22.07■■□□□ 1.12
TRA2A-208ENST00000490942 PMFBP1Q8TBY8 1022 aa22.07■■□□□ 1.12
TRA2A-208ENST00000490942 LRRC59Q96AG4 307 aaKnown RBP22.07■■□□□ 1.12
TRA2A-208ENST00000490942 ZNF692Q9BU19 519 aaPredicted RBP22.07■■□□□ 1.12
TRA2A-208ENST00000490942 CABP1Q9NZU7 370 aa22.07■■□□□ 1.12
TRA2A-208ENST00000490942 PHLPP1O60346 1717 aa22.06■■□□□ 1.12
TRA2A-208ENST00000490942 SBNO1A3KN83 1393 aa22.06■■□□□ 1.12
TRA2A-208ENST00000490942 ACEP12821 1306 aa22.06■■□□□ 1.12
TRA2A-208ENST00000490942 KRT28Q7Z3Y7 464 aa22.04■■□□□ 1.12
TRA2A-208ENST00000490942 CPSF1Q10570 1443 aaKnown RBP22.04■■□□□ 1.12
TRA2A-208ENST00000490942 JCADQ9P266 1359 aa22.02■■□□□ 1.12
TRA2A-208ENST00000490942 TERF2IPQ9NYB0 399 aa22.02■■□□□ 1.12
TRA2A-208ENST00000490942 DDX17Q92841 729 aaKnown RBP22.01■■□□□ 1.11
TRA2A-208ENST00000490942 USP6P35125 1406 aa22■■□□□ 1.11
TRA2A-208ENST00000490942 SPATA31A3Q5VYP0 1347 aa22■■□□□ 1.11
TRA2A-208ENST00000490942 CD163L1Q9NR16 1453 aa21.99■■□□□ 1.11
TRA2A-208ENST00000490942 HDGFL2Q7Z4V5 671 aaPredicted RBP21.99■■□□□ 1.11
TRA2A-208ENST00000490942 TMC1Q8TDI8 760 aa21.99■■□□□ 1.11
TRA2A-208ENST00000490942 SLC12A5Q9H2X9 1139 aa21.99■■□□□ 1.11
TRA2A-208ENST00000490942 ARHGEF10O15013 1369 aa21.99■■□□□ 1.11
TRA2A-208ENST00000490942 ANKRD36BQ8N2N9 1353 aa21.99■■□□□ 1.11
TRA2A-208ENST00000490942 TNS3Q68CZ2 1445 aa21.98■■□□□ 1.11
TRA2A-208ENST00000490942 SSH2Q76I76 1423 aa21.98■■□□□ 1.11
TRA2A-208ENST00000490942 TRPM3Q9HCF6 1732 aaPredicted RBP21.97■■□□□ 1.11
TRA2A-208ENST00000490942 SHPRHQ149N8 1683 aa21.96■■□□□ 1.11
TRA2A-208ENST00000490942 C11orf95C9JLR9 678 aaPredicted RBP21.96■■□□□ 1.11
TRA2A-208ENST00000490942 SPATA31A6Q5VVP1 1343 aa21.96■■□□□ 1.11
TRA2A-208ENST00000490942 AKAP12Q02952 1782 aa21.96■■□□□ 1.11
TRA2A-208ENST00000490942 XPCQ01831 940 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms