RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 RGS12O14924 1447 aa17.61■□□□□ 0.41
FDPS-215ENST00000490140 COL22A1Q8NFW1 1626 aaPredicted RBP17.61■□□□□ 0.41
FDPS-215ENST00000490140 ADAMTS2O95450 1211 aa17.6■□□□□ 0.41
FDPS-215ENST00000490140 TECPR2O15040 1411 aa17.59■□□□□ 0.41
FDPS-215ENST00000490140 ORAI2Q96SN7 254 aa17.59■□□□□ 0.41
FDPS-215ENST00000490140 ATAD2Q6PL18 1390 aa17.58■□□□□ 0.4
FDPS-215ENST00000490140 FOXD1Q16676 465 aa17.58■□□□□ 0.4
FDPS-215ENST00000490140 TRPC5Q9UL62 973 aaPredicted RBP17.58■□□□□ 0.4
FDPS-215ENST00000490140 USP21Q9UK80 565 aa17.57■□□□□ 0.4
FDPS-215ENST00000490140 KNDC1Q76NI1 1749 aa17.57■□□□□ 0.4
FDPS-215ENST00000490140 ESCO1Q5FWF5 840 aa17.56■□□□□ 0.4
FDPS-215ENST00000490140 IFT172Q9UG01 1749 aa17.55■□□□□ 0.4
FDPS-215ENST00000490140 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
FDPS-215ENST00000490140 FNBP4Q8N3X1 1017 aaPredicted RBP17.54■□□□□ 0.4
FDPS-215ENST00000490140 MYOM2P54296 1465 aa17.54■□□□□ 0.4
FDPS-215ENST00000490140 PXDNQ92626 1479 aa17.54■□□□□ 0.4
FDPS-215ENST00000490140 KIF1AQ12756 1690 aa17.54■□□□□ 0.4
FDPS-215ENST00000490140 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
FDPS-215ENST00000490140 PIK3C2GO75747 1445 aa17.53■□□□□ 0.4
FDPS-215ENST00000490140 RGL3Q3MIN7 710 aa17.52■□□□□ 0.4
FDPS-215ENST00000490140 MARF1Q9Y4F3 1742 aaKnown RBP17.52■□□□□ 0.39
FDPS-215ENST00000490140 ADGRF5Q8IZF2 1346 aa17.51■□□□□ 0.39
FDPS-215ENST00000490140 ATRNO75882 1429 aa17.51■□□□□ 0.39
FDPS-215ENST00000490140 MPHOSPH9Q99550 1183 aa17.5■□□□□ 0.39
FDPS-215ENST00000490140 STK26Q9P289 416 aa17.5■□□□□ 0.39
FDPS-215ENST00000490140 FMN2Q9NZ56 1722 aa17.5■□□□□ 0.39
FDPS-215ENST00000490140 FOXO3O43524 673 aa17.49■□□□□ 0.39
FDPS-215ENST00000490140 YTHDC2Q9H6S0 1430 aaKnown RBP17.48■□□□□ 0.39
FDPS-215ENST00000490140 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.48■□□□□ 0.39
FDPS-215ENST00000490140 EP400Q96L91 3159 aa17.46■□□□□ 0.39
FDPS-215ENST00000490140 DHX57Q6P158 1386 aaKnown RBP17.45■□□□□ 0.38
FDPS-215ENST00000490140 WAPLQ7Z5K2 1190 aa17.45■□□□□ 0.38
FDPS-215ENST00000490140 CCDC125Q86Z20 511 aa17.45■□□□□ 0.38
FDPS-215ENST00000490140 SIRT1Q96EB6 747 aa17.45■□□□□ 0.38
FDPS-215ENST00000490140 NUTM2FA1L443 756 aa17.44■□□□□ 0.38
FDPS-215ENST00000490140 HAP1P54257 671 aaPredicted RBP17.44■□□□□ 0.38
FDPS-215ENST00000490140 XPCQ01831 940 aaPredicted RBP17.44■□□□□ 0.38
FDPS-215ENST00000490140 BCL9LQ86UU0 1499 aa17.44■□□□□ 0.38
FDPS-215ENST00000490140 PSME1Q06323 249 aa17.43■□□□□ 0.38
FDPS-215ENST00000490140 TMEM132EQ6IEE7 984 aa17.43■□□□□ 0.38
FDPS-215ENST00000490140 SPATA31A3Q5VYP0 1347 aa17.43■□□□□ 0.38
FDPS-215ENST00000490140 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
FDPS-215ENST00000490140 USP32Q8NFA0 1604 aa17.43■□□□□ 0.38
FDPS-215ENST00000490140 GJD4Q96KN9 370 aaPredicted RBP17.42■□□□□ 0.38
FDPS-215ENST00000490140 SRCAPQ6ZRS2 3230 aa17.42■□□□□ 0.38
FDPS-215ENST00000490140 PLEKHH1Q9ULM0 1364 aa17.41■□□□□ 0.38
FDPS-215ENST00000490140 TNS3Q68CZ2 1445 aa17.41■□□□□ 0.38
FDPS-215ENST00000490140 ARHGEF10O15013 1369 aa17.4■□□□□ 0.38
FDPS-215ENST00000490140 KRT28Q7Z3Y7 464 aa17.4■□□□□ 0.38
FDPS-215ENST00000490140 UNC5CLQ8IV45 518 aa17.4■□□□□ 0.38
FDPS-215ENST00000490140 C14orf93Q9H972 538 aaKnown RBP17.4■□□□□ 0.38
FDPS-215ENST00000490140 ZRANB1Q9UGI0 708 aa17.4■□□□□ 0.38
FDPS-215ENST00000490140 EIF3AQ14152 1382 aaKnown RBP17.4■□□□□ 0.38
FDPS-215ENST00000490140 SLIT2O94813 1529 aa17.39■□□□□ 0.37
FDPS-215ENST00000490140 DLC1Q96QB1 1528 aa17.39■□□□□ 0.37
FDPS-215ENST00000490140 PHF8Q9UPP1 1060 aa17.39■□□□□ 0.37
FDPS-215ENST00000490140 ANKARQ7Z5J8 1434 aa17.38■□□□□ 0.37
FDPS-215ENST00000490140 SBNO1A3KN83 1393 aa17.38■□□□□ 0.37
FDPS-215ENST00000490140 NWD2Q9ULI1 1742 aa17.37■□□□□ 0.37
FDPS-215ENST00000490140 RALGAPBQ86X10 1494 aa17.37■□□□□ 0.37
FDPS-215ENST00000490140 ADGRB2O60241 1585 aa17.36■□□□□ 0.37
FDPS-215ENST00000490140 POGKQ9P215 609 aa17.36■□□□□ 0.37
FDPS-215ENST00000490140 PRAM1Q96QH2 718 aa17.35■□□□□ 0.37
FDPS-215ENST00000490140 BLMP54132 1417 aaPredicted RBP17.35■□□□□ 0.37
FDPS-215ENST00000490140 RGPD8O14715 1765 aaPredicted RBP17.35■□□□□ 0.37
FDPS-215ENST00000490140 GLI3P10071 1580 aa17.34■□□□□ 0.37
FDPS-215ENST00000490140 PLCH1Q4KWH8 1693 aa17.34■□□□□ 0.37
FDPS-215ENST00000490140 CFAP70Q5T0N1 1121 aa17.34■□□□□ 0.37
FDPS-215ENST00000490140 ABCA3Q99758 1704 aa17.33■□□□□ 0.37
FDPS-215ENST00000490140 SF3B2Q13435 895 aaKnown RBP17.33■□□□□ 0.36
FDPS-215ENST00000490140 LMOD2Q6P5Q4 547 aa17.33■□□□□ 0.36
FDPS-215ENST00000490140 STAC3Q96MF2 364 aa17.33■□□□□ 0.36
FDPS-215ENST00000490140 GPRASP1Q5JY77 1395 aa17.32■□□□□ 0.36
FDPS-215ENST00000490140 VPS72Q15906 364 aa17.32■□□□□ 0.36
FDPS-215ENST00000490140 SAFB2Q14151 953 aaKnown RBP eCLIP17.31■□□□□ 0.36
FDPS-215ENST00000490140 CCDC9Q9Y3X0 531 aaKnown RBP17.31■□□□□ 0.36
FDPS-215ENST00000490140 RAB3GAP2Q9H2M9 1393 aa17.3■□□□□ 0.36
FDPS-215ENST00000490140 ADGRB1O14514 1584 aa17.29■□□□□ 0.36
FDPS-215ENST00000490140 TULP4Q9NRJ4 1543 aa17.29■□□□□ 0.36
FDPS-215ENST00000490140 BRWD3Q6RI45 1802 aa17.27■□□□□ 0.36
FDPS-215ENST00000490140 SEPT12Q8IYM1 358 aa17.27■□□□□ 0.36
FDPS-215ENST00000490140 ITSN1Q15811 1721 aa17.27■□□□□ 0.35
FDPS-215ENST00000490140 A0A0G2JS52 829 aa17.26■□□□□ 0.35
FDPS-215ENST00000490140 MYT1Q01538 1121 aa17.26■□□□□ 0.35
FDPS-215ENST00000490140 PMFBP1Q8TBY8 1022 aa17.26■□□□□ 0.35
FDPS-215ENST00000490140 CABLES1Q8TDN4 633 aa17.26■□□□□ 0.35
FDPS-215ENST00000490140 COL14A1Q05707 1796 aaKnown RBP17.25■□□□□ 0.35
FDPS-215ENST00000490140 TRPM3Q9HCF6 1732 aaPredicted RBP17.25■□□□□ 0.35
FDPS-215ENST00000490140 KRT27Q7Z3Y8 459 aa17.25■□□□□ 0.35
FDPS-215ENST00000490140 TRAK1Q9UPV9 953 aa17.25■□□□□ 0.35
FDPS-215ENST00000490140 ALS2Q96Q42 1657 aa17.24■□□□□ 0.35
FDPS-215ENST00000490140 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
FDPS-215ENST00000490140 ONECUT3O60422 494 aaPredicted RBP17.23■□□□□ 0.35
FDPS-215ENST00000490140 DCAF11Q8TEB1 546 aa17.23■□□□□ 0.35
FDPS-215ENST00000490140 MINK1Q8N4C8 1332 aaPredicted RBP17.22■□□□□ 0.35
FDPS-215ENST00000490140 NRAPQ86VF7 1730 aa17.22■□□□□ 0.35
FDPS-215ENST00000490140 WASLO00401 505 aaPredicted RBP17.22■□□□□ 0.35
FDPS-215ENST00000490140 NGDNQ8NEJ9 315 aaKnown RBP17.22■□□□□ 0.35
FDPS-215ENST00000490140 HIRIP3Q9BW71 556 aaPredicted RBP17.22■□□□□ 0.35
FDPS-215ENST00000490140 BAG6P46379 1132 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms