RNA–Protein interactions for RNA: ENST00000489966.1

PI4KA-216, Transcript of phosphatidylinositol 4-kinase alpha, humanhuman

TSL 2

Gene PI4KA, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PI4KA-216ENST00000489966 DDX17Q92841 729 aaKnown RBP13.7□□□□□ -0.22
PI4KA-216ENST00000489966 LRRC59Q96AG4 307 aaKnown RBP13.7□□□□□ -0.22
PI4KA-216ENST00000489966 LRP6O75581 1613 aa13.7□□□□□ -0.22
PI4KA-216ENST00000489966 LAMC1P11047 1609 aa13.7□□□□□ -0.22
PI4KA-216ENST00000489966 PLEKHH1Q9ULM0 1364 aa13.7□□□□□ -0.22
PI4KA-216ENST00000489966 SOS2Q07890 1332 aaPredicted RBP13.69□□□□□ -0.22
PI4KA-216ENST00000489966 STAC3Q96MF2 364 aa13.69□□□□□ -0.22
PI4KA-216ENST00000489966 KNDC1Q76NI1 1749 aa13.68□□□□□ -0.22
PI4KA-216ENST00000489966 CDC42BPGQ6DT37 1551 aa13.68□□□□□ -0.22
PI4KA-216ENST00000489966 DHX57Q6P158 1386 aaKnown RBP13.68□□□□□ -0.22
PI4KA-216ENST00000489966 PNPLA6Q8IY17 1366 aa13.66□□□□□ -0.22
PI4KA-216ENST00000489966 DCAF11Q8TEB1 546 aa13.65□□□□□ -0.22
PI4KA-216ENST00000489966 ADGRB1O14514 1584 aa13.65□□□□□ -0.22
PI4KA-216ENST00000489966 ESCO1Q5FWF5 840 aa13.64□□□□□ -0.23
PI4KA-216ENST00000489966 KDM2AQ9Y2K7 1162 aa13.63□□□□□ -0.23
PI4KA-216ENST00000489966 DLC1Q96QB1 1528 aa13.63□□□□□ -0.23
PI4KA-216ENST00000489966 NUTM2BA6NNL0 878 aaPredicted RBP13.62□□□□□ -0.23
PI4KA-216ENST00000489966 NUTM2EB1AL46 878 aaPredicted RBP13.62□□□□□ -0.23
PI4KA-216ENST00000489966 NUTM2AQ8IVF1 878 aaPredicted RBP13.62□□□□□ -0.23
PI4KA-216ENST00000489966 PRAM1Q96QH2 718 aa13.62□□□□□ -0.23
PI4KA-216ENST00000489966 NPHP3Q7Z494 1330 aa13.62□□□□□ -0.23
PI4KA-216ENST00000489966 MEX3CQ5U5Q3 659 aaKnown RBP13.61□□□□□ -0.23
PI4KA-216ENST00000489966 ZNF772Q68DY9 489 aaPredicted RBP13.61□□□□□ -0.23
PI4KA-216ENST00000489966 PXDNQ92626 1479 aa13.61□□□□□ -0.23
PI4KA-216ENST00000489966 NUTM2FA1L443 756 aa13.6□□□□□ -0.23
PI4KA-216ENST00000489966 FOXO3O43524 673 aa13.6□□□□□ -0.23
PI4KA-216ENST00000489966 FMN2Q9NZ56 1722 aa13.6□□□□□ -0.23
PI4KA-216ENST00000489966 POGKQ9P215 609 aa13.58□□□□□ -0.24
PI4KA-216ENST00000489966 TRAK1Q9UPV9 953 aa13.58□□□□□ -0.24
PI4KA-216ENST00000489966 AFF2P51816 1311 aa13.58□□□□□ -0.24
PI4KA-216ENST00000489966 SAFB2Q14151 953 aaKnown RBP eCLIP13.57□□□□□ -0.24
PI4KA-216ENST00000489966 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
PI4KA-216ENST00000489966 PHF8Q9UPP1 1060 aa13.56□□□□□ -0.24
PI4KA-216ENST00000489966 COL22A1Q8NFW1 1626 aaPredicted RBP13.56□□□□□ -0.24
PI4KA-216ENST00000489966 ADGRB2O60241 1585 aa13.55□□□□□ -0.24
PI4KA-216ENST00000489966 FNBP4Q8N3X1 1017 aaPredicted RBP13.55□□□□□ -0.24
PI4KA-216ENST00000489966 SPATA31A3Q5VYP0 1347 aa13.55□□□□□ -0.24
PI4KA-216ENST00000489966 ADAMTS2O95450 1211 aa13.54□□□□□ -0.24
PI4KA-216ENST00000489966 RXRBP28702 533 aa13.54□□□□□ -0.24
PI4KA-216ENST00000489966 KRT28Q7Z3Y7 464 aa13.54□□□□□ -0.24
PI4KA-216ENST00000489966 C8orf37Q96NL8 207 aa13.54□□□□□ -0.24
PI4KA-216ENST00000489966 ANKARQ7Z5J8 1434 aa13.54□□□□□ -0.24
PI4KA-216ENST00000489966 KIF1AQ12756 1690 aa13.53□□□□□ -0.24
PI4KA-216ENST00000489966 WASLO00401 505 aaPredicted RBP13.53□□□□□ -0.24
PI4KA-216ENST00000489966 NGLY1Q96IV0 654 aa13.53□□□□□ -0.24
PI4KA-216ENST00000489966 USP32Q8NFA0 1604 aa13.53□□□□□ -0.24
PI4KA-216ENST00000489966 RGPD8O14715 1765 aaPredicted RBP13.53□□□□□ -0.24
PI4KA-216ENST00000489966 NBPF1Q3BBV0 1214 aa13.52□□□□□ -0.25
PI4KA-216ENST00000489966 HIRIP3Q9BW71 556 aaPredicted RBP13.52□□□□□ -0.25
PI4KA-216ENST00000489966 QTRT2Q9H974 415 aaKnown RBP13.52□□□□□ -0.25
PI4KA-216ENST00000489966 MINK1Q8N4C8 1332 aaPredicted RBP13.52□□□□□ -0.25
PI4KA-216ENST00000489966 PRR36Q9H6K5 1346 aa13.52□□□□□ -0.25
PI4KA-216ENST00000489966 CDK12Q9NYV4 1490 aaPredicted RBP13.52□□□□□ -0.25
PI4KA-216ENST00000489966 KIAA1210Q9ULL0 1709 aa13.51□□□□□ -0.25
PI4KA-216ENST00000489966 TRIM26Q12899 539 aaPredicted RBP13.51□□□□□ -0.25
PI4KA-216ENST00000489966 L3MBTL2Q969R5 705 aa13.51□□□□□ -0.25
PI4KA-216ENST00000489966 SBNO1A3KN83 1393 aa13.5□□□□□ -0.25
PI4KA-216ENST00000489966 RBM6P78332 1123 aaKnown RBP13.5□□□□□ -0.25
PI4KA-216ENST00000489966 PSME1Q06323 249 aa13.5□□□□□ -0.25
PI4KA-216ENST00000489966 SIN3AQ96ST3 1273 aa13.5□□□□□ -0.25
PI4KA-216ENST00000489966 EIF3AQ14152 1382 aaKnown RBP13.49□□□□□ -0.25
PI4KA-216ENST00000489966 PMFBP1Q8TBY8 1022 aa13.49□□□□□ -0.25
PI4KA-216ENST00000489966 ARHGEF28Q8N1W1 1705 aaKnown RBP13.48□□□□□ -0.25
PI4KA-216ENST00000489966 USP21Q9UK80 565 aa13.48□□□□□ -0.25
PI4KA-216ENST00000489966 TULP4Q9NRJ4 1543 aa13.48□□□□□ -0.25
PI4KA-216ENST00000489966 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
PI4KA-216ENST00000489966 TNS3Q68CZ2 1445 aa13.47□□□□□ -0.25
PI4KA-216ENST00000489966 ATRNO75882 1429 aa13.47□□□□□ -0.25
PI4KA-216ENST00000489966 NUDT16Q96DE0 195 aaKnown RBP13.46□□□□□ -0.25
PI4KA-216ENST00000489966 CDK19Q9BWU1 502 aa13.46□□□□□ -0.25
PI4KA-216ENST00000489966 TRPC5Q9UL62 973 aaPredicted RBP13.46□□□□□ -0.25
PI4KA-216ENST00000489966 UPF1Q92900 1129 aaKnown RBP eCLIP13.45□□□□□ -0.26
PI4KA-216ENST00000489966 ARHGEF10O15013 1369 aa13.45□□□□□ -0.26
PI4KA-216ENST00000489966 SLIT2O94813 1529 aa13.44□□□□□ -0.26
PI4KA-216ENST00000489966 ATP7BP35670 1465 aa13.44□□□□□ -0.26
PI4KA-216ENST00000489966 CABLES1Q8TDN4 633 aa13.44□□□□□ -0.26
PI4KA-216ENST00000489966 PCGF6Q9BYE7 350 aa13.44□□□□□ -0.26
PI4KA-216ENST00000489966 RGS12O14924 1447 aa13.44□□□□□ -0.26
PI4KA-216ENST00000489966 MARF1Q9Y4F3 1742 aaKnown RBP13.44□□□□□ -0.26
PI4KA-216ENST00000489966 PLEKHG3A1L390 1219 aa13.43□□□□□ -0.26
PI4KA-216ENST00000489966 TRPM3Q9HCF6 1732 aaPredicted RBP13.43□□□□□ -0.26
PI4KA-216ENST00000489966 CCDC61Q9Y6R9 512 aa13.43□□□□□ -0.26
PI4KA-216ENST00000489966 GPRASP1Q5JY77 1395 aa13.43□□□□□ -0.26
PI4KA-216ENST00000489966 NEUROD1Q13562 356 aa13.42□□□□□ -0.26
PI4KA-216ENST00000489966 UNC5CLQ8IV45 518 aa13.42□□□□□ -0.26
PI4KA-216ENST00000489966 NGDNQ8NEJ9 315 aaKnown RBP13.42□□□□□ -0.26
PI4KA-216ENST00000489966 CENPJQ9HC77 1338 aaPredicted RBP13.41□□□□□ -0.26
PI4KA-216ENST00000489966 POLR3AO14802 1390 aaPredicted RBP13.41□□□□□ -0.26
PI4KA-216ENST00000489966 ALS2Q96Q42 1657 aa13.4□□□□□ -0.26
PI4KA-216ENST00000489966 NBPF8Q3BBV2 869 aa13.4□□□□□ -0.26
PI4KA-216ENST00000489966 LMOD2Q6P5Q4 547 aa13.4□□□□□ -0.26
PI4KA-216ENST00000489966 GJD4Q96KN9 370 aaPredicted RBP13.4□□□□□ -0.26
PI4KA-216ENST00000489966 FAM83GA6ND36 823 aa13.39□□□□□ -0.27
PI4KA-216ENST00000489966 TRPM1Q7Z4N2 1603 aa13.39□□□□□ -0.27
PI4KA-216ENST00000489966 ACEP12821 1306 aa13.39□□□□□ -0.27
PI4KA-216ENST00000489966 ABCA3Q99758 1704 aa13.38□□□□□ -0.27
PI4KA-216ENST00000489966 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.38□□□□□ -0.27
PI4KA-216ENST00000489966 ITSN1Q15811 1721 aa13.37□□□□□ -0.27
PI4KA-216ENST00000489966 HAP1P54257 671 aaPredicted RBP13.37□□□□□ -0.27
PI4KA-216ENST00000489966 VPS72Q15906 364 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms