RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 PLA2G2CQ5R387 149 aa8.19□□□□□ -1.1
NF1-213ENST00000489712 MOXD2PA6NHM9 499 aa8.18□□□□□ -1.1
NF1-213ENST00000489712 SPRYD7Q5W111 196 aa8.18□□□□□ -1.1
NF1-213ENST00000489712 RETREG3Q86VR2 466 aa8.18□□□□□ -1.1
NF1-213ENST00000489712 EMID1Q96A84 441 aaPredicted RBP8.18□□□□□ -1.1
NF1-213ENST00000489712 DXOO77932 396 aaKnown RBP8.17□□□□□ -1.1
NF1-213ENST00000489712 MMP16P51512 607 aa8.17□□□□□ -1.1
NF1-213ENST00000489712 LIAT1Q6ZQX7 453 aa8.17□□□□□ -1.1
NF1-213ENST00000489712 TBC1D2Q9BYX2 928 aa8.17□□□□□ -1.1
NF1-213ENST00000489712 C6orf229H3BNL8 230 aa8.16□□□□□ -1.1
NF1-213ENST00000489712 NRG2O14511 850 aaPredicted RBP8.16□□□□□ -1.1
NF1-213ENST00000489712 ZNF697Q5TEC3 545 aa8.16□□□□□ -1.1
NF1-213ENST00000489712 ZNF598Q86UK7 904 aaKnown RBP8.16□□□□□ -1.1
NF1-213ENST00000489712 GFRA3O60609 400 aa8.15□□□□□ -1.1
NF1-213ENST00000489712 NDUFV2P19404 249 aa8.15□□□□□ -1.1
NF1-213ENST00000489712 GJA5P36382 358 aa8.15□□□□□ -1.1
NF1-213ENST00000489712 RPIAP49247 311 aa8.15□□□□□ -1.1
NF1-213ENST00000489712 PCDHGC3Q9UN70 934 aa8.15□□□□□ -1.1
NF1-213ENST00000489712 PDZRN3Q9UPQ7 1066 aa8.15□□□□□ -1.1
NF1-213ENST00000489712 JUNDP17535 347 aa8.14□□□□□ -1.11
NF1-213ENST00000489712 Q6ZNB5 142 aa8.14□□□□□ -1.11
NF1-213ENST00000489712 SYMPKQ92797 1274 aaKnown RBP8.14□□□□□ -1.11
NF1-213ENST00000489712 ZBTB24O43167 697 aaPredicted RBP8.13□□□□□ -1.11
NF1-213ENST00000489712 MTMR2Q13614 643 aa8.13□□□□□ -1.11
NF1-213ENST00000489712 RSBN1LQ6PCB5 846 aaPredicted RBP8.13□□□□□ -1.11
NF1-213ENST00000489712 SPDYE5A6NIY4 337 aa8.12□□□□□ -1.11
NF1-213ENST00000489712 SPTLC1O15269 473 aa8.11□□□□□ -1.11
NF1-213ENST00000489712 PRR20EP86478 221 aa8.11□□□□□ -1.11
NF1-213ENST00000489712 PRR20CP86479 221 aa8.11□□□□□ -1.11
NF1-213ENST00000489712 PRR20DP86480 221 aa8.11□□□□□ -1.11
NF1-213ENST00000489712 PRR20BP86481 221 aa8.11□□□□□ -1.11
NF1-213ENST00000489712 PRR20AP86496 221 aa8.11□□□□□ -1.11
NF1-213ENST00000489712 CD2BP2O95400 341 aaKnown RBP8.1□□□□□ -1.11
NF1-213ENST00000489712 MYSM1Q5VVJ2 828 aa8.1□□□□□ -1.11
NF1-213ENST00000489712 TRIM67Q6ZTA4 783 aa8.1□□□□□ -1.11
NF1-213ENST00000489712 CCDC24Q8N4L8 307 aa8.1□□□□□ -1.11
NF1-213ENST00000489712 TRIM32Q13049 653 aa8.09□□□□□ -1.11
NF1-213ENST00000489712 RIC3Q7Z5B4 369 aa8.09□□□□□ -1.11
NF1-213ENST00000489712 NUDT12Q9BQG2 462 aa8.09□□□□□ -1.11
NF1-213ENST00000489712 ZBTB3Q9H5J0 574 aa8.09□□□□□ -1.11
NF1-213ENST00000489712 GDF9O60383 454 aa8.08□□□□□ -1.12
NF1-213ENST00000489712 PRR7Q8TB68 274 aa8.08□□□□□ -1.12
NF1-213ENST00000489712 KDM4CQ9H3R0 1056 aa8.08□□□□□ -1.12
NF1-213ENST00000489712 GPBP1L1Q9HC44 474 aaPredicted RBP8.08□□□□□ -1.12
NF1-213ENST00000489712 TNFRSF10AO00220 468 aa8.07□□□□□ -1.12
NF1-213ENST00000489712 CCNYL3P0C7X3 344 aa8.07□□□□□ -1.12
NF1-213ENST00000489712 FOXC1Q12948 553 aa8.07□□□□□ -1.12
NF1-213ENST00000489712 PTPRNQ16849 979 aa8.07□□□□□ -1.12
NF1-213ENST00000489712 PRPF38BQ5VTL8 546 aaKnown RBP8.07□□□□□ -1.12
NF1-213ENST00000489712 RSPH6AQ9H0K4 717 aa8.07□□□□□ -1.12
NF1-213ENST00000489712 CLK2P49760 499 aaKnown RBP8.06□□□□□ -1.12
NF1-213ENST00000489712 CSPP1Q1MSJ5 1256 aa8.06□□□□□ -1.12
NF1-213ENST00000489712 TUSC1Q2TAM9 212 aa8.06□□□□□ -1.12
NF1-213ENST00000489712 DESI1Q6ICB0 168 aa8.06□□□□□ -1.12
NF1-213ENST00000489712 DDRGK1Q96HY6 314 aa8.06□□□□□ -1.12
NF1-213ENST00000489712 PCDHB15Q9Y5E8 787 aa8.06□□□□□ -1.12
NF1-213ENST00000489712 HRCP23327 699 aa8.05□□□□□ -1.12
NF1-213ENST00000489712 PKD2L1Q9P0L9 805 aa8.05□□□□□ -1.12
NF1-213ENST00000489712 LIMD1Q9UGP4 676 aa8.05□□□□□ -1.12
NF1-213ENST00000489712 PKDCCQ504Y2 493 aa8.04□□□□□ -1.12
NF1-213ENST00000489712 CABLES1Q8TDN4 633 aa8.04□□□□□ -1.12
NF1-213ENST00000489712 FAM187AA6NFU0 413 aa8.03□□□□□ -1.12
NF1-213ENST00000489712 CFAP99D6REC4 459 aa8.03□□□□□ -1.12
NF1-213ENST00000489712 NUTM2BA6NNL0 878 aaPredicted RBP8.02□□□□□ -1.13
NF1-213ENST00000489712 NUTM2EB1AL46 878 aaPredicted RBP8.02□□□□□ -1.13
NF1-213ENST00000489712 WNT7AO00755 349 aa8.02□□□□□ -1.13
NF1-213ENST00000489712 WNT7BP56706 349 aa8.02□□□□□ -1.13
NF1-213ENST00000489712 QPCTQ16769 361 aa8.02□□□□□ -1.13
NF1-213ENST00000489712 NUTM2DQ5VT03 806 aaPredicted RBP8.02□□□□□ -1.13
NF1-213ENST00000489712 TRAF7Q6Q0C0 670 aa8.02□□□□□ -1.13
NF1-213ENST00000489712 NUTM2AQ8IVF1 878 aaPredicted RBP8.02□□□□□ -1.13
NF1-213ENST00000489712 DGAT1O75907 488 aa8.01□□□□□ -1.13
NF1-213ENST00000489712 SH3D19Q5HYK7 790 aa8.01□□□□□ -1.13
NF1-213ENST00000489712 CYP4X1Q8N118 509 aa8.01□□□□□ -1.13
NF1-213ENST00000489712 FAM117AQ9C073 453 aa8.01□□□□□ -1.13
NF1-213ENST00000489712 LILRB3O75022 631 aa8□□□□□ -1.13
NF1-213ENST00000489712 HELBQ8NG08 1087 aaPredicted RBP8□□□□□ -1.13
NF1-213ENST00000489712 TSC1Q92574 1164 aa8□□□□□ -1.13
NF1-213ENST00000489712 UNC93B1Q9H1C4 597 aa8□□□□□ -1.13
NF1-213ENST00000489712 EVA1BQ9NVM1 165 aa8□□□□□ -1.13
NF1-213ENST00000489712 POLR3EQ9NVU0 708 aa8□□□□□ -1.13
NF1-213ENST00000489712 LCE2BO14633 110 aa7.99□□□□□ -1.13
NF1-213ENST00000489712 KCNH2Q12809 1159 aa7.99□□□□□ -1.13
NF1-213ENST00000489712 NEUROD2Q15784 382 aa7.99□□□□□ -1.13
NF1-213ENST00000489712 TPRNQ4KMQ1 711 aa7.99□□□□□ -1.13
NF1-213ENST00000489712 PTCRAQ6ISU1 281 aaPredicted RBP7.99□□□□□ -1.13
NF1-213ENST00000489712 LYPD8Q6UX82 237 aa7.99□□□□□ -1.13
NF1-213ENST00000489712 TOR4AQ9NXH8 423 aa7.99□□□□□ -1.13
NF1-213ENST00000489712 TTC24A2A3L6 582 aaPredicted RBP7.98□□□□□ -1.13
NF1-213ENST00000489712 SKOR1P84550 965 aa7.98□□□□□ -1.13
NF1-213ENST00000489712 SKIV2LQ15477 1246 aaKnown RBP7.98□□□□□ -1.13
NF1-213ENST00000489712 MRGPRX2Q96LB1 330 aa7.98□□□□□ -1.13
NF1-213ENST00000489712 PLEKHG3A1L390 1219 aa7.97□□□□□ -1.13
NF1-213ENST00000489712 CTHP32929 405 aa7.97□□□□□ -1.13
NF1-213ENST00000489712 RC3H1Q5TC82 1133 aaKnown RBP7.97□□□□□ -1.13
NF1-213ENST00000489712 SNIP1Q8TAD8 396 aaKnown RBP7.96□□□□□ -1.14
NF1-213ENST00000489712 ATP1B4Q9UN42 357 aaPredicted RBP7.96□□□□□ -1.14
NF1-213ENST00000489712 F12P00748 615 aaPredicted RBP7.95□□□□□ -1.14
NF1-213ENST00000489712 LINC01559Q495D7 138 aa7.95□□□□□ -1.14
NF1-213ENST00000489712 RTL5Q5HYW3 569 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms