RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TRAK1Q9UPV9 953 aa23.1■■□□□ 1.29
CTDSP1-209ENST00000488627 KNDC1Q76NI1 1749 aa23.1■■□□□ 1.29
CTDSP1-209ENST00000488627 AHDC1Q5TGY3 1603 aaPredicted RBP23.09■■□□□ 1.29
CTDSP1-209ENST00000488627 JCADQ9P266 1359 aa23.08■■□□□ 1.29
CTDSP1-209ENST00000488627 MED1Q15648 1581 aaPredicted RBP23.08■■□□□ 1.29
CTDSP1-209ENST00000488627 DLC1Q96QB1 1528 aa23.08■■□□□ 1.28
CTDSP1-209ENST00000488627 SAFB2Q14151 953 aaKnown RBP eCLIP23.07■■□□□ 1.28
CTDSP1-209ENST00000488627 COL16A1Q07092 1604 aaPredicted RBP23.07■■□□□ 1.28
CTDSP1-209ENST00000488627 CDC42BPGQ6DT37 1551 aa23.06■■□□□ 1.28
CTDSP1-209ENST00000488627 NBPF1Q3BBV0 1214 aa23.06■■□□□ 1.28
CTDSP1-209ENST00000488627 ILDR2Q71H61 639 aa23.06■■□□□ 1.28
CTDSP1-209ENST00000488627 POGKQ9P215 609 aa23.06■■□□□ 1.28
CTDSP1-209ENST00000488627 PHLPP1O60346 1717 aa23.05■■□□□ 1.28
CTDSP1-209ENST00000488627 NUTM2FA1L443 756 aa23.04■■□□□ 1.28
CTDSP1-209ENST00000488627 ESCO1Q5FWF5 840 aa23.03■■□□□ 1.28
CTDSP1-209ENST00000488627 LRRC59Q96AG4 307 aaKnown RBP23.01■■□□□ 1.27
CTDSP1-209ENST00000488627 SOS2Q07890 1332 aaPredicted RBP23.01■■□□□ 1.27
CTDSP1-209ENST00000488627 RGS17Q9UGC6 210 aaPredicted RBP22.99■■□□□ 1.27
CTDSP1-209ENST00000488627 SPATA31A6Q5VVP1 1343 aa22.98■■□□□ 1.27
CTDSP1-209ENST00000488627 FOXO3O43524 673 aa22.97■■□□□ 1.27
CTDSP1-209ENST00000488627 HIRIP3Q9BW71 556 aaPredicted RBP22.97■■□□□ 1.27
CTDSP1-209ENST00000488627 MINK1Q8N4C8 1332 aaPredicted RBP22.97■■□□□ 1.27
CTDSP1-209ENST00000488627 NHSL1Q5SYE7 1610 aa22.97■■□□□ 1.27
CTDSP1-209ENST00000488627 NPHP3Q7Z494 1330 aa22.95■■□□□ 1.26
CTDSP1-209ENST00000488627 PHF23Q9BUL5 403 aaPredicted RBP22.95■■□□□ 1.26
CTDSP1-209ENST00000488627 NBPF8Q3BBV2 869 aa22.94■■□□□ 1.26
CTDSP1-209ENST00000488627 PCGF6Q9BYE7 350 aa22.94■■□□□ 1.26
CTDSP1-209ENST00000488627 WASLO00401 505 aaPredicted RBP22.93■■□□□ 1.26
CTDSP1-209ENST00000488627 KIAA1210Q9ULL0 1709 aa22.93■■□□□ 1.26
CTDSP1-209ENST00000488627 PNPLA6Q8IY17 1366 aa22.92■■□□□ 1.26
CTDSP1-209ENST00000488627 FMN2Q9NZ56 1722 aa22.92■■□□□ 1.26
CTDSP1-209ENST00000488627 PRR36Q9H6K5 1346 aa22.91■■□□□ 1.26
CTDSP1-209ENST00000488627 LRP6O75581 1613 aa22.91■■□□□ 1.26
CTDSP1-209ENST00000488627 XPCQ01831 940 aaPredicted RBP22.91■■□□□ 1.26
CTDSP1-209ENST00000488627 PHF8Q9UPP1 1060 aa22.91■■□□□ 1.26
CTDSP1-209ENST00000488627 ADGRB2O60241 1585 aa22.91■■□□□ 1.26
CTDSP1-209ENST00000488627 PXDNQ92626 1479 aa22.9■■□□□ 1.26
CTDSP1-209ENST00000488627 ANKARQ7Z5J8 1434 aa22.9■■□□□ 1.26
CTDSP1-209ENST00000488627 SHPRHQ149N8 1683 aa22.88■■□□□ 1.25
CTDSP1-209ENST00000488627 NUTM2BA6NNL0 878 aaPredicted RBP22.88■■□□□ 1.25
CTDSP1-209ENST00000488627 NUTM2EB1AL46 878 aaPredicted RBP22.88■■□□□ 1.25
CTDSP1-209ENST00000488627 NUTM2AQ8IVF1 878 aaPredicted RBP22.88■■□□□ 1.25
CTDSP1-209ENST00000488627 TONSLQ96HA7 1378 aa22.87■■□□□ 1.25
CTDSP1-209ENST00000488627 KRT28Q7Z3Y7 464 aa22.86■■□□□ 1.25
CTDSP1-209ENST00000488627 ARHGEF28Q8N1W1 1705 aaKnown RBP22.85■■□□□ 1.25
CTDSP1-209ENST00000488627 PMFBP1Q8TBY8 1022 aa22.85■■□□□ 1.25
CTDSP1-209ENST00000488627 CDK19Q9BWU1 502 aa22.85■■□□□ 1.25
CTDSP1-209ENST00000488627 CENPJQ9HC77 1338 aaPredicted RBP22.84■■□□□ 1.25
CTDSP1-209ENST00000488627 POTEAQ6S8J7 498 aa22.84■■□□□ 1.25
CTDSP1-209ENST00000488627 ROCK2O75116 1388 aaKnown RBP22.84■■□□□ 1.25
CTDSP1-209ENST00000488627 EIF3AQ14152 1382 aaKnown RBP22.84■■□□□ 1.25
CTDSP1-209ENST00000488627 NUDT16Q96DE0 195 aaKnown RBP22.83■■□□□ 1.25
CTDSP1-209ENST00000488627 GPRASP1Q5JY77 1395 aa22.83■■□□□ 1.25
CTDSP1-209ENST00000488627 SPATA31A3Q5VYP0 1347 aa22.82■■□□□ 1.24
CTDSP1-209ENST00000488627 TULP4Q9NRJ4 1543 aa22.82■■□□□ 1.24
CTDSP1-209ENST00000488627 USP32Q8NFA0 1604 aa22.82■■□□□ 1.24
CTDSP1-209ENST00000488627 MEX3CQ5U5Q3 659 aaKnown RBP22.82■■□□□ 1.24
CTDSP1-209ENST00000488627 TRPM1Q7Z4N2 1603 aa22.81■■□□□ 1.24
CTDSP1-209ENST00000488627 PSME1Q06323 249 aa22.79■■□□□ 1.24
CTDSP1-209ENST00000488627 KIF1AQ12756 1690 aa22.78■■□□□ 1.24
CTDSP1-209ENST00000488627 ATP7BP35670 1465 aa22.78■■□□□ 1.24
CTDSP1-209ENST00000488627 SOCS7O14512 581 aa22.77■■□□□ 1.24
CTDSP1-209ENST00000488627 CCDC61Q9Y6R9 512 aa22.77■■□□□ 1.24
CTDSP1-209ENST00000488627 CLSPNQ9HAW4 1339 aa22.77■■□□□ 1.24
CTDSP1-209ENST00000488627 SBNO1A3KN83 1393 aa22.76■■□□□ 1.23
CTDSP1-209ENST00000488627 RGPD8O14715 1765 aaPredicted RBP22.76■■□□□ 1.23
CTDSP1-209ENST00000488627 ADAMTS2O95450 1211 aa22.76■■□□□ 1.23
CTDSP1-209ENST00000488627 CARD11Q9BXL7 1154 aa22.75■■□□□ 1.23
CTDSP1-209ENST00000488627 PLEKHG3A1L390 1219 aa22.74■■□□□ 1.23
CTDSP1-209ENST00000488627 ZNF772Q68DY9 489 aaPredicted RBP22.74■■□□□ 1.23
CTDSP1-209ENST00000488627 NGDNQ8NEJ9 315 aaKnown RBP22.74■■□□□ 1.23
CTDSP1-209ENST00000488627 RALGAPBQ86X10 1494 aa22.73■■□□□ 1.23
CTDSP1-209ENST00000488627 C8orf37Q96NL8 207 aa22.73■■□□□ 1.23
CTDSP1-209ENST00000488627 CABP2Q9NPB3 220 aa22.73■■□□□ 1.23
CTDSP1-209ENST00000488627 TNS3Q68CZ2 1445 aa22.73■■□□□ 1.23
CTDSP1-209ENST00000488627 COL22A1Q8NFW1 1626 aaPredicted RBP22.72■■□□□ 1.23
CTDSP1-209ENST00000488627 SRPK2P78362 688 aaKnown RBP22.72■■□□□ 1.23
CTDSP1-209ENST00000488627 AFF2P51816 1311 aa22.72■■□□□ 1.23
CTDSP1-209ENST00000488627 NGLY1Q96IV0 654 aa22.7■■□□□ 1.22
CTDSP1-209ENST00000488627 POLR3AO14802 1390 aaPredicted RBP22.7■■□□□ 1.22
CTDSP1-209ENST00000488627 ACEP12821 1306 aa22.69■■□□□ 1.22
CTDSP1-209ENST00000488627 FNBP4Q8N3X1 1017 aaPredicted RBP22.69■■□□□ 1.22
CTDSP1-209ENST00000488627 TIMELESSQ9UNS1 1208 aa22.69■■□□□ 1.22
CTDSP1-209ENST00000488627 EVC2Q86UK5 1308 aa22.68■■□□□ 1.22
CTDSP1-209ENST00000488627 CABLES1Q8TDN4 633 aa22.68■■□□□ 1.22
CTDSP1-209ENST00000488627 ARHGEF10O15013 1369 aa22.67■■□□□ 1.22
CTDSP1-209ENST00000488627 LMOD2Q6P5Q4 547 aa22.67■■□□□ 1.22
CTDSP1-209ENST00000488627 SBNO2Q9Y2G9 1366 aa22.65■■□□□ 1.22
CTDSP1-209ENST00000488627 CABP1Q9NZU7 370 aa22.65■■□□□ 1.22
CTDSP1-209ENST00000488627 QRICH2Q9H0J4 1663 aa22.64■■□□□ 1.21
CTDSP1-209ENST00000488627 QTRT2Q9H974 415 aaKnown RBP22.63■■□□□ 1.21
CTDSP1-209ENST00000488627 PPIP5K1Q6PFW1 1433 aa22.63■■□□□ 1.21
CTDSP1-209ENST00000488627 PAK3O75914 559 aaPredicted RBP22.62■■□□□ 1.21
CTDSP1-209ENST00000488627 CCER1Q8TC90 406 aaPredicted RBP22.62■■□□□ 1.21
CTDSP1-209ENST00000488627 USP21Q9UK80 565 aa22.62■■□□□ 1.21
CTDSP1-209ENST00000488627 TRPM3Q9HCF6 1732 aaPredicted RBP22.62■■□□□ 1.21
CTDSP1-209ENST00000488627 PLEKHG5O94827 1062 aa22.61■■□□□ 1.21
CTDSP1-209ENST00000488627 RXRBP28702 533 aa22.6■■□□□ 1.21
CTDSP1-209ENST00000488627 TESK2Q96S53 571 aa22.6■■□□□ 1.21
CTDSP1-209ENST00000488627 TOPAZ1Q8N9V7 1692 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms