RNA–Protein interactions for RNA: ENST00000488317.1

SRRM1-215, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-215ENST00000488317 SOCS7O14512 581 aa8.69□□□□□ -1.02
SRRM1-215ENST00000488317 ATP6V1AP38606 617 aa8.69□□□□□ -1.02
SRRM1-215ENST00000488317 MRPL50Q8N5N7 158 aaKnown RBP8.69□□□□□ -1.02
SRRM1-215ENST00000488317 ZFRQ96KR1 1074 aaKnown RBP8.68□□□□□ -1.02
SRRM1-215ENST00000488317 PLSCR2Q9NRY7 297 aa8.68□□□□□ -1.02
SRRM1-215ENST00000488317 NDUFB9Q9Y6M9 179 aa8.68□□□□□ -1.02
SRRM1-215ENST00000488317 NECTIN2Q92692 538 aa8.67□□□□□ -1.02
SRRM1-215ENST00000488317 FAM163AQ96GL9 167 aaPredicted RBP8.67□□□□□ -1.02
SRRM1-215ENST00000488317 CALR3Q96L12 384 aaKnown RBP8.67□□□□□ -1.02
SRRM1-215ENST00000488317 STAC3Q96MF2 364 aa8.67□□□□□ -1.02
SRRM1-215ENST00000488317 LRCH3Q96II8 777 aa8.66□□□□□ -1.02
SRRM1-215ENST00000488317 BHMG1C9JSJ3 638 aaPredicted RBP8.65□□□□□ -1.02
SRRM1-215ENST00000488317 CFAP99D6REC4 459 aa8.65□□□□□ -1.02
SRRM1-215ENST00000488317 TK2O00142 265 aa8.65□□□□□ -1.02
SRRM1-215ENST00000488317 PDIA4P13667 645 aaKnown RBP8.65□□□□□ -1.02
SRRM1-215ENST00000488317 LRRN4Q8WUT4 740 aa8.65□□□□□ -1.02
SRRM1-215ENST00000488317 SYMPKQ92797 1274 aaKnown RBP8.65□□□□□ -1.02
SRRM1-215ENST00000488317 HMX1Q9NP08 348 aaPredicted RBP8.65□□□□□ -1.02
SRRM1-215ENST00000488317 GOLGA8CPA6NN73 597 aa8.64□□□□□ -1.03
SRRM1-215ENST00000488317 POM121CA8CG34 1229 aa8.64□□□□□ -1.03
SRRM1-215ENST00000488317 GJD4Q96KN9 370 aaPredicted RBP8.64□□□□□ -1.03
SRRM1-215ENST00000488317 HS3ST6Q96QI5 342 aa8.64□□□□□ -1.03
SRRM1-215ENST00000488317 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.64□□□□□ -1.03
SRRM1-215ENST00000488317 PUS10Q3MIT2 529 aaKnown RBP8.63□□□□□ -1.03
SRRM1-215ENST00000488317 PRR7Q8TB68 274 aa8.63□□□□□ -1.03
SRRM1-215ENST00000488317 ACTN4O43707 911 aaKnown RBP8.62□□□□□ -1.03
SRRM1-215ENST00000488317 WASHC4Q2M389 1173 aa8.62□□□□□ -1.03
SRRM1-215ENST00000488317 ADGRD1Q6QNK2 874 aa8.62□□□□□ -1.03
SRRM1-215ENST00000488317 GLMNQ92990 594 aa8.62□□□□□ -1.03
SRRM1-215ENST00000488317 PODXL2Q9NZ53 605 aa8.62□□□□□ -1.03
SRRM1-215ENST00000488317 LSM11P83369 360 aaKnown RBP eCLIP8.61□□□□□ -1.03
SRRM1-215ENST00000488317 Q3C1V9 767 aa8.61□□□□□ -1.03
SRRM1-215ENST00000488317 PRR14Q9BWN1 585 aa8.61□□□□□ -1.03
SRRM1-215ENST00000488317 TRIM34Q9BYJ4 488 aa8.61□□□□□ -1.03
SRRM1-215ENST00000488317 SLC27A5Q9Y2P5 690 aa8.61□□□□□ -1.03
SRRM1-215ENST00000488317 PPP4CP60510 307 aa8.6□□□□□ -1.03
SRRM1-215ENST00000488317 TRIM26Q12899 539 aaPredicted RBP8.6□□□□□ -1.03
SRRM1-215ENST00000488317 IRF5Q13568 498 aa8.6□□□□□ -1.03
SRRM1-215ENST00000488317 MORN1Q5T089 497 aa8.6□□□□□ -1.03
SRRM1-215ENST00000488317 HDGFL1Q5TGJ6 251 aa8.6□□□□□ -1.03
SRRM1-215ENST00000488317 RETREG3Q86VR2 466 aa8.6□□□□□ -1.03
SRRM1-215ENST00000488317 ANKK1Q8NFD2 765 aa8.6□□□□□ -1.03
SRRM1-215ENST00000488317 POTEB3A0JP26 581 aa8.59□□□□□ -1.03
SRRM1-215ENST00000488317 POTEBQ6S5H4 581 aa8.59□□□□□ -1.03
SRRM1-215ENST00000488317 ANKRD13DQ6ZTN6 518 aa8.59□□□□□ -1.03
SRRM1-215ENST00000488317 VAC14Q08AM6 782 aa8.58□□□□□ -1.04
SRRM1-215ENST00000488317 NR6A1Q15406 480 aa8.58□□□□□ -1.04
SRRM1-215ENST00000488317 EPS8L1Q8TE68 723 aa8.58□□□□□ -1.04
SRRM1-215ENST00000488317 HPS5Q9UPZ3 1129 aa8.57□□□□□ -1.04
SRRM1-215ENST00000488317 PER1O15534 1290 aaPredicted RBP8.56□□□□□ -1.04
SRRM1-215ENST00000488317 PNMA1Q8ND90 353 aa8.56□□□□□ -1.04
SRRM1-215ENST00000488317 ACIN1Q9UKV3 1341 aaKnown RBP8.55□□□□□ -1.04
SRRM1-215ENST00000488317 HRO43593 1189 aa8.55□□□□□ -1.04
SRRM1-215ENST00000488317 BCAMP50895 628 aa8.55□□□□□ -1.04
SRRM1-215ENST00000488317 TSR3Q9UJK0 312 aaKnown RBP8.55□□□□□ -1.04
SRRM1-215ENST00000488317 ZBTB7CA1YPR0 619 aa8.54□□□□□ -1.04
SRRM1-215ENST00000488317 SOWAHBA6NEL2 793 aa8.54□□□□□ -1.04
SRRM1-215ENST00000488317 DESI1Q6ICB0 168 aa8.54□□□□□ -1.04
SRRM1-215ENST00000488317 BLOC1S3Q6QNY0 202 aa8.54□□□□□ -1.04
SRRM1-215ENST00000488317 RNF19BQ6ZMZ0 732 aa8.54□□□□□ -1.04
SRRM1-215ENST00000488317 WNT2BQ93097 391 aa8.54□□□□□ -1.04
SRRM1-215ENST00000488317 USB1Q9BQ65 265 aaKnown RBP8.54□□□□□ -1.04
SRRM1-215ENST00000488317 PCDHB3Q9Y5E6 796 aa8.54□□□□□ -1.04
SRRM1-215ENST00000488317 NR1I2O75469 434 aa8.53□□□□□ -1.04
SRRM1-215ENST00000488317 PPP1R15AO75807 674 aaPredicted RBP8.53□□□□□ -1.04
SRRM1-215ENST00000488317 FMNL1O95466 1100 aaPredicted RBP8.53□□□□□ -1.04
SRRM1-215ENST00000488317 RFX1P22670 979 aa8.53□□□□□ -1.04
SRRM1-215ENST00000488317 APLP1P51693 650 aa8.53□□□□□ -1.04
SRRM1-215ENST00000488317 LYPD8Q6UX82 237 aa8.53□□□□□ -1.04
SRRM1-215ENST00000488317 GPR37L1O60883 481 aa8.52□□□□□ -1.05
SRRM1-215ENST00000488317 BRICD5Q6PL45 260 aa8.52□□□□□ -1.05
SRRM1-215ENST00000488317 SCUBE3Q8IX30 993 aa8.52□□□□□ -1.05
SRRM1-215ENST00000488317 ADAMTS19Q8TE59 1207 aa8.52□□□□□ -1.05
SRRM1-215ENST00000488317 SEMA3FQ13275 785 aa8.51□□□□□ -1.05
SRRM1-215ENST00000488317 RETREG2Q8NC44 543 aa8.5□□□□□ -1.05
SRRM1-215ENST00000488317 SALL2Q9Y467 1007 aaPredicted RBP8.5□□□□□ -1.05
SRRM1-215ENST00000488317 SOX11P35716 441 aa8.49□□□□□ -1.05
SRRM1-215ENST00000488317 EIF4G2P78344 907 aaKnown RBP eCLIP8.49□□□□□ -1.05
SRRM1-215ENST00000488317 TRAIPQ9BWF2 469 aa8.49□□□□□ -1.05
SRRM1-215ENST00000488317 ALG2Q9H553 416 aa8.49□□□□□ -1.05
SRRM1-215ENST00000488317 CTHP32929 405 aa8.48□□□□□ -1.05
SRRM1-215ENST00000488317 PPP1R12CQ9BZL4 782 aa8.48□□□□□ -1.05
SRRM1-215ENST00000488317 JUNDP17535 347 aa8.47□□□□□ -1.05
SRRM1-215ENST00000488317 PBXIP1Q96AQ6 731 aa8.47□□□□□ -1.05
SRRM1-215ENST00000488317 WBP1LQ9NX94 342 aa8.47□□□□□ -1.05
SRRM1-215ENST00000488317 PALM3A6NDB9 673 aaPredicted RBP8.46□□□□□ -1.06
SRRM1-215ENST00000488317 PDE4CQ08493 712 aa8.46□□□□□ -1.06
SRRM1-215ENST00000488317 AEBP1Q8IUX7 1158 aa8.46□□□□□ -1.06
SRRM1-215ENST00000488317 THAP11Q96EK4 314 aa8.46□□□□□ -1.06
SRRM1-215ENST00000488317 TFIP11Q9UBB9 837 aaKnown RBP8.46□□□□□ -1.06
SRRM1-215ENST00000488317 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.45□□□□□ -1.06
SRRM1-215ENST00000488317 LMOD1P29536 600 aaPredicted RBP8.45□□□□□ -1.06
SRRM1-215ENST00000488317 COPS2P61201 443 aa8.45□□□□□ -1.06
SRRM1-215ENST00000488317 NR1H3Q13133 447 aa8.45□□□□□ -1.06
SRRM1-215ENST00000488317 PTPRNQ16849 979 aa8.45□□□□□ -1.06
SRRM1-215ENST00000488317 CFAP70Q5T0N1 1121 aa8.45□□□□□ -1.06
SRRM1-215ENST00000488317 KCTD17Q8N5Z5 321 aa8.45□□□□□ -1.06
SRRM1-215ENST00000488317 FKBPLQ9UIM3 349 aa8.45□□□□□ -1.06
SRRM1-215ENST00000488317 ZBBXA8MT70 800 aa8.44□□□□□ -1.06
SRRM1-215ENST00000488317 LCE2DQ5TA82 110 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms