RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 WAPLQ7Z5K2 1190 aa15.8■□□□□ 0.12
UBE4B-210ENST00000488228 SAFB2Q14151 953 aaKnown RBP eCLIP15.79■□□□□ 0.12
UBE4B-210ENST00000488228 PRAM1Q96QH2 718 aa15.79■□□□□ 0.12
UBE4B-210ENST00000488228 UBAP1LF5GYI3 381 aa15.78■□□□□ 0.12
UBE4B-210ENST00000488228 TIMELESSQ9UNS1 1208 aa15.78■□□□□ 0.12
UBE4B-210ENST00000488228 USP32Q8NFA0 1604 aa15.78■□□□□ 0.12
UBE4B-210ENST00000488228 MST1RQ04912 1400 aa15.77■□□□□ 0.11
UBE4B-210ENST00000488228 POGKQ9P215 609 aa15.76■□□□□ 0.11
UBE4B-210ENST00000488228 ITSN1Q15811 1721 aa15.75■□□□□ 0.11
UBE4B-210ENST00000488228 C19orf44Q9H6X5 657 aa15.75■□□□□ 0.11
UBE4B-210ENST00000488228 TULP4Q9NRJ4 1543 aa15.74■□□□□ 0.11
UBE4B-210ENST00000488228 TOPAZ1Q8N9V7 1692 aa15.74■□□□□ 0.11
UBE4B-210ENST00000488228 CARD11Q9BXL7 1154 aa15.74■□□□□ 0.11
UBE4B-210ENST00000488228 EIF3AQ14152 1382 aaKnown RBP15.74■□□□□ 0.11
UBE4B-210ENST00000488228 MINK1Q8N4C8 1332 aaPredicted RBP15.73■□□□□ 0.11
UBE4B-210ENST00000488228 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
UBE4B-210ENST00000488228 NHSL1Q5SYE7 1610 aa15.73■□□□□ 0.11
UBE4B-210ENST00000488228 PIP4K2BP78356 416 aa15.73■□□□□ 0.11
UBE4B-210ENST00000488228 SIRT1Q96EB6 747 aa15.73■□□□□ 0.11
UBE4B-210ENST00000488228 PHLPP1O60346 1717 aa15.72■□□□□ 0.11
UBE4B-210ENST00000488228 TOM1O60784 492 aa15.72■□□□□ 0.11
UBE4B-210ENST00000488228 ATF3P18847 181 aa15.72■□□□□ 0.11
UBE4B-210ENST00000488228 FBXO41Q8TF61 875 aa15.72■□□□□ 0.11
UBE4B-210ENST00000488228 HIRIP3Q9BW71 556 aaPredicted RBP15.72■□□□□ 0.11
UBE4B-210ENST00000488228 CENPJQ9HC77 1338 aaPredicted RBP15.71■□□□□ 0.11
UBE4B-210ENST00000488228 KIF1AQ12756 1690 aa15.71■□□□□ 0.11
UBE4B-210ENST00000488228 CADPS2Q86UW7 1296 aa15.71■□□□□ 0.11
UBE4B-210ENST00000488228 C1orf167Q5SNV9 1468 aa15.71■□□□□ 0.1
UBE4B-210ENST00000488228 USP47Q96K76 1375 aa15.7■□□□□ 0.1
UBE4B-210ENST00000488228 AHDC1Q5TGY3 1603 aaPredicted RBP15.68■□□□□ 0.1
UBE4B-210ENST00000488228 ATP7BP35670 1465 aa15.68■□□□□ 0.1
UBE4B-210ENST00000488228 COL16A1Q07092 1604 aaPredicted RBP15.68■□□□□ 0.1
UBE4B-210ENST00000488228 NUTM2FA1L443 756 aa15.67■□□□□ 0.1
UBE4B-210ENST00000488228 SLAIN2Q9P270 581 aa15.67■□□□□ 0.1
UBE4B-210ENST00000488228 ANKARQ7Z5J8 1434 aa15.66■□□□□ 0.1
UBE4B-210ENST00000488228 ILDR1Q86SU0 546 aaPredicted RBP15.65■□□□□ 0.1
UBE4B-210ENST00000488228 SBNO2Q9Y2G9 1366 aa15.64■□□□□ 0.09
UBE4B-210ENST00000488228 PRR36Q9H6K5 1346 aa15.64■□□□□ 0.09
UBE4B-210ENST00000488228 WASLO00401 505 aaPredicted RBP15.63■□□□□ 0.09
UBE4B-210ENST00000488228 BRINP3Q76B58 766 aa15.63■□□□□ 0.09
UBE4B-210ENST00000488228 MYOM1P52179 1685 aa15.61■□□□□ 0.09
UBE4B-210ENST00000488228 ORAI2Q96SN7 254 aa15.61■□□□□ 0.09
UBE4B-210ENST00000488228 AKAP12Q02952 1782 aa15.61■□□□□ 0.09
UBE4B-210ENST00000488228 TRPM3Q9HCF6 1732 aaPredicted RBP15.6■□□□□ 0.09
UBE4B-210ENST00000488228 ST20-MTHFSA0A0A6YYL1 179 aa15.6■□□□□ 0.09
UBE4B-210ENST00000488228 HSPA1LP34931 641 aa15.6■□□□□ 0.09
UBE4B-210ENST00000488228 CDK19Q9BWU1 502 aa15.6■□□□□ 0.09
UBE4B-210ENST00000488228 ESCO1Q5FWF5 840 aa15.59■□□□□ 0.09
UBE4B-210ENST00000488228 DDX17Q92841 729 aaKnown RBP15.59■□□□□ 0.09
UBE4B-210ENST00000488228 SHPRHQ149N8 1683 aa15.59■□□□□ 0.09
UBE4B-210ENST00000488228 DISP3Q9P2K9 1392 aa15.59■□□□□ 0.09
UBE4B-210ENST00000488228 PXDNQ92626 1479 aa15.59■□□□□ 0.09
UBE4B-210ENST00000488228 SRPK2P78362 688 aaKnown RBP15.58■□□□□ 0.08
UBE4B-210ENST00000488228 TESK2Q96S53 571 aa15.58■□□□□ 0.08
UBE4B-210ENST00000488228 CABP2Q9NPB3 220 aa15.58■□□□□ 0.08
UBE4B-210ENST00000488228 EVC2Q86UK5 1308 aa15.58■□□□□ 0.08
UBE4B-210ENST00000488228 MON2Q7Z3U7 1717 aa15.57■□□□□ 0.08
UBE4B-210ENST00000488228 PPIP5K1Q6PFW1 1433 aa15.57■□□□□ 0.08
UBE4B-210ENST00000488228 NUDT16Q96DE0 195 aaKnown RBP15.56■□□□□ 0.08
UBE4B-210ENST00000488228 NRKQ7Z2Y5 1582 aa15.56■□□□□ 0.08
UBE4B-210ENST00000488228 ABCA3Q99758 1704 aa15.56■□□□□ 0.08
UBE4B-210ENST00000488228 ALS2Q96Q42 1657 aa15.55■□□□□ 0.08
UBE4B-210ENST00000488228 HSPA5P11021 654 aaKnown RBP15.55■□□□□ 0.08
UBE4B-210ENST00000488228 PHF8Q9UPP1 1060 aa15.55■□□□□ 0.08
UBE4B-210ENST00000488228 XPCQ01831 940 aaPredicted RBP15.54■□□□□ 0.08
UBE4B-210ENST00000488228 PMFBP1Q8TBY8 1022 aa15.54■□□□□ 0.08
UBE4B-210ENST00000488228 EIF4G2P78344 907 aaKnown RBP eCLIP15.53■□□□□ 0.08
UBE4B-210ENST00000488228 COL22A1Q8NFW1 1626 aaPredicted RBP15.53■□□□□ 0.08
UBE4B-210ENST00000488228 ATAD2Q6PL18 1390 aa15.52■□□□□ 0.08
UBE4B-210ENST00000488228 NPHP3Q7Z494 1330 aa15.52■□□□□ 0.08
UBE4B-210ENST00000488228 FOXO3O43524 673 aa15.52■□□□□ 0.08
UBE4B-210ENST00000488228 CRYBG1Q9Y4K1 1723 aa15.51■□□□□ 0.07
UBE4B-210ENST00000488228 POLR3AO14802 1390 aaPredicted RBP15.5■□□□□ 0.07
UBE4B-210ENST00000488228 SOS2Q07890 1332 aaPredicted RBP15.49■□□□□ 0.07
UBE4B-210ENST00000488228 PIK3C2AO00443 1686 aa15.49■□□□□ 0.07
UBE4B-210ENST00000488228 CD163L1Q9NR16 1453 aa15.49■□□□□ 0.07
UBE4B-210ENST00000488228 CCDC61Q9Y6R9 512 aa15.49■□□□□ 0.07
UBE4B-210ENST00000488228 TNS3Q68CZ2 1445 aa15.49■□□□□ 0.07
UBE4B-210ENST00000488228 MARF1Q9Y4F3 1742 aaKnown RBP15.48■□□□□ 0.07
UBE4B-210ENST00000488228 PHRF1Q9P1Y6 1649 aaKnown RBP15.48■□□□□ 0.07
UBE4B-210ENST00000488228 TMF1P82094 1093 aa15.48■□□□□ 0.07
UBE4B-210ENST00000488228 NGDNQ8NEJ9 315 aaKnown RBP15.48■□□□□ 0.07
UBE4B-210ENST00000488228 MED1Q15648 1581 aaPredicted RBP15.48■□□□□ 0.07
UBE4B-210ENST00000488228 PNPLA6Q8IY17 1366 aa15.48■□□□□ 0.07
UBE4B-210ENST00000488228 ACEP12821 1306 aa15.47■□□□□ 0.07
UBE4B-210ENST00000488228 JCADQ9P266 1359 aa15.47■□□□□ 0.07
UBE4B-210ENST00000488228 USP6P35125 1406 aa15.46■□□□□ 0.07
UBE4B-210ENST00000488228 KIF20BQ96Q89 1820 aa15.46■□□□□ 0.07
UBE4B-210ENST00000488228 CABP1Q9NZU7 370 aa15.46■□□□□ 0.07
UBE4B-210ENST00000488228 LRP6O75581 1613 aa15.46■□□□□ 0.06
UBE4B-210ENST00000488228 PLEKHG3A1L390 1219 aa15.45■□□□□ 0.06
UBE4B-210ENST00000488228 KRT28Q7Z3Y7 464 aa15.45■□□□□ 0.06
UBE4B-210ENST00000488228 CPSF1Q10570 1443 aaKnown RBP15.44■□□□□ 0.06
UBE4B-210ENST00000488228 PSME1Q06323 249 aa15.44■□□□□ 0.06
UBE4B-210ENST00000488228 TMC1Q8TDI8 760 aa15.44■□□□□ 0.06
UBE4B-210ENST00000488228 A0A1W2PP64 1363 aa15.44■□□□□ 0.06
UBE4B-210ENST00000488228 SBNO1A3KN83 1393 aa15.44■□□□□ 0.06
UBE4B-210ENST00000488228 ZEB1P37275 1124 aaPredicted RBP15.43■□□□□ 0.06
UBE4B-210ENST00000488228 POLR3GLQ9BT43 218 aa15.43■□□□□ 0.06
UBE4B-210ENST00000488228 NINLQ9Y2I6 1382 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms