RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 CDC42BPGQ6DT37 1551 aa4.36□□□□□ -1.71
DEPDC1-203ENST00000488146 ABCC5O15440 1437 aa4.36□□□□□ -1.71
DEPDC1-203ENST00000488146 UBAP1LF5GYI3 381 aa4.36□□□□□ -1.71
DEPDC1-203ENST00000488146 PAK3O75914 559 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-203ENST00000488146 DCBLD2Q96PD2 775 aa4.36□□□□□ -1.71
DEPDC1-203ENST00000488146 ZNF335Q9H4Z2 1342 aaPredicted RBP4.36□□□□□ -1.71
DEPDC1-203ENST00000488146 NCKAP5LQ9HCH0 1330 aa4.36□□□□□ -1.71
DEPDC1-203ENST00000488146 P3H3Q8IVL6 736 aa4.36□□□□□ -1.71
DEPDC1-203ENST00000488146 TBX22Q9Y458 520 aa4.36□□□□□ -1.71
DEPDC1-203ENST00000488146 NRXN3Q9Y4C0 1643 aa4.35□□□□□ -1.71
DEPDC1-203ENST00000488146 TSPY4P0CV99 314 aa4.35□□□□□ -1.71
DEPDC1-203ENST00000488146 TSPY10P0CW01 314 aa4.35□□□□□ -1.71
DEPDC1-203ENST00000488146 ILDR2Q71H61 639 aa4.35□□□□□ -1.71
DEPDC1-203ENST00000488146 EID1Q9Y6B2 187 aa4.35□□□□□ -1.71
DEPDC1-203ENST00000488146 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.35□□□□□ -1.71
DEPDC1-203ENST00000488146 NWD2Q9ULI1 1742 aa4.35□□□□□ -1.71
DEPDC1-203ENST00000488146 RGPD3A6NKT7 1758 aaPredicted RBP4.34□□□□□ -1.71
DEPDC1-203ENST00000488146 RGPD4Q7Z3J3 1758 aa4.34□□□□□ -1.71
DEPDC1-203ENST00000488146 MSH6P52701 1360 aa4.34□□□□□ -1.71
DEPDC1-203ENST00000488146 KIF15Q9NS87 1388 aa4.34□□□□□ -1.71
DEPDC1-203ENST00000488146 TTBK1Q5TCY1 1321 aaPredicted RBP4.34□□□□□ -1.71
DEPDC1-203ENST00000488146 TECPR2O15040 1411 aa4.34□□□□□ -1.71
DEPDC1-203ENST00000488146 MST1RQ04912 1400 aa4.34□□□□□ -1.71
DEPDC1-203ENST00000488146 E9PCH4 1651 aa4.34□□□□□ -1.71
DEPDC1-203ENST00000488146 WASHC2CQ9Y4E1 1318 aa4.34□□□□□ -1.71
DEPDC1-203ENST00000488146 ADGRB2O60241 1585 aa4.34□□□□□ -1.72
DEPDC1-203ENST00000488146 ASXL1Q8IXJ9 1541 aa4.34□□□□□ -1.72
DEPDC1-203ENST00000488146 CEBPAP49715 358 aaPredicted RBP4.33□□□□□ -1.72
DEPDC1-203ENST00000488146 NBR1Q14596 966 aa4.33□□□□□ -1.72
DEPDC1-203ENST00000488146 ZNF772Q68DY9 489 aaPredicted RBP4.33□□□□□ -1.72
DEPDC1-203ENST00000488146 CCDC125Q86Z20 511 aa4.33□□□□□ -1.72
DEPDC1-203ENST00000488146 GALR2O43603 387 aaPredicted RBP4.33□□□□□ -1.72
DEPDC1-203ENST00000488146 IFT172Q9UG01 1749 aa4.33□□□□□ -1.72
DEPDC1-203ENST00000488146 RPGRIP1LQ68CZ1 1315 aa4.33□□□□□ -1.72
DEPDC1-203ENST00000488146 HFM1A2PYH4 1435 aa4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 ADAMTS13Q76LX8 1427 aa4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 ADGRL3Q9HAR2 1447 aa4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 DLC1Q96QB1 1528 aa4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 UBTFP17480 764 aaKnown RBP4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 HSPA1LP34931 641 aa4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 MNX1P50219 401 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 DCAF8Q5TAQ9 597 aa4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 PHF12Q96QT6 1004 aa4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 NALCNQ8IZF0 1738 aa4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 RIMS2Q9UQ26 1411 aa4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 STK25O00506 426 aa4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 HNRNPMP52272 730 aaKnown RBP eCLIP4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 SIRT1Q96EB6 747 aa4.32□□□□□ -1.72
DEPDC1-203ENST00000488146 MLECQ14165 292 aa4.31□□□□□ -1.72
DEPDC1-203ENST00000488146 TIMELESSQ9UNS1 1208 aa4.31□□□□□ -1.72
DEPDC1-203ENST00000488146 KIF1BO60333 1816 aa4.31□□□□□ -1.72
DEPDC1-203ENST00000488146 TULP1O00294 542 aaPredicted RBP4.31□□□□□ -1.72
DEPDC1-203ENST00000488146 HS6ST3Q8IZP7 471 aa4.31□□□□□ -1.72
DEPDC1-203ENST00000488146 KIF3BO15066 747 aa4.3□□□□□ -1.72
DEPDC1-203ENST00000488146 ABCC6O95255 1503 aa4.3□□□□□ -1.72
DEPDC1-203ENST00000488146 PPLO60437 1756 aa4.3□□□□□ -1.72
DEPDC1-203ENST00000488146 DISP2A7MBM2 1401 aa4.3□□□□□ -1.72
DEPDC1-203ENST00000488146 ATRNO75882 1429 aa4.3□□□□□ -1.72
DEPDC1-203ENST00000488146 GTPBP6O43824 516 aaPredicted RBP4.3□□□□□ -1.72
DEPDC1-203ENST00000488146 PLEKHG5O94827 1062 aa4.3□□□□□ -1.72
DEPDC1-203ENST00000488146 CADPS2Q86UW7 1296 aa4.3□□□□□ -1.72
DEPDC1-203ENST00000488146 BRD4O60885 1362 aaPredicted RBP4.3□□□□□ -1.72
DEPDC1-203ENST00000488146 TMEM94Q12767 1356 aa4.3□□□□□ -1.72
DEPDC1-203ENST00000488146 RGPD1P0DJD0 1748 aa4.29□□□□□ -1.72
DEPDC1-203ENST00000488146 PYGBP11216 843 aa4.29□□□□□ -1.72
DEPDC1-203ENST00000488146 NUBP1P53384 320 aa4.29□□□□□ -1.72
DEPDC1-203ENST00000488146 ANKRD50Q9ULJ7 1429 aa4.29□□□□□ -1.72
DEPDC1-203ENST00000488146 MYO5BQ9ULV0 1848 aa4.29□□□□□ -1.72
DEPDC1-203ENST00000488146 EIF3AQ14152 1382 aaKnown RBP4.29□□□□□ -1.72
DEPDC1-203ENST00000488146 FMN2Q9NZ56 1722 aa4.29□□□□□ -1.72
DEPDC1-203ENST00000488146 STAC3Q96MF2 364 aa4.29□□□□□ -1.72
DEPDC1-203ENST00000488146 MYOM2P54296 1465 aa4.29□□□□□ -1.72
DEPDC1-203ENST00000488146 NRXN1Q9ULB1 1477 aa4.29□□□□□ -1.72
DEPDC1-203ENST00000488146 ATAD2Q6PL18 1390 aa4.29□□□□□ -1.72
DEPDC1-203ENST00000488146 C11orf95C9JLR9 678 aaPredicted RBP4.28□□□□□ -1.72
DEPDC1-203ENST00000488146 RASEFQ8IZ41 740 aa4.28□□□□□ -1.72
DEPDC1-203ENST00000488146 LRPPRCP42704 1394 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-203ENST00000488146 ANKARQ7Z5J8 1434 aa4.28□□□□□ -1.72
DEPDC1-203ENST00000488146 RRBP1Q9P2E9 1410 aaKnown RBP4.28□□□□□ -1.72
DEPDC1-203ENST00000488146 ABCA3Q99758 1704 aa4.28□□□□□ -1.72
DEPDC1-203ENST00000488146 PARD3Q8TEW0 1356 aa4.28□□□□□ -1.72
DEPDC1-203ENST00000488146 LRP6O75581 1613 aa4.28□□□□□ -1.72
DEPDC1-203ENST00000488146 BCL11BQ9C0K0 894 aaPredicted RBP4.28□□□□□ -1.73
DEPDC1-203ENST00000488146 STK24Q9Y6E0 443 aa4.28□□□□□ -1.73
DEPDC1-203ENST00000488146 KIAA1210Q9ULL0 1709 aa4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 RIOK3O14730 519 aaKnown RBP4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 GGT6Q6P531 493 aa4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 TXNDC2Q86VQ3 553 aa4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 C19orf44Q9H6X5 657 aa4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 MYT1LQ9UL68 1186 aa4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 RALGAPBQ86X10 1494 aa4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 NRAPQ86VF7 1730 aa4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 CRYBG1Q9Y4K1 1723 aa4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 ZFP91Q96JP5 570 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 TSPYL2Q9H2G4 693 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 RGS17Q9UGC6 210 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 PNPLA6Q8IY17 1366 aa4.27□□□□□ -1.73
DEPDC1-203ENST00000488146 CLTCL1P53675 1640 aa4.26□□□□□ -1.73
DEPDC1-203ENST00000488146 USP54Q70EL1 1684 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms