RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 HSP90AA2PQ14568 343 aaPredicted RBP18.02■□□□□ 0.48
COL16A1-214ENST00000488128 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
COL16A1-214ENST00000488128 GGT6Q6P531 493 aa18.01■□□□□ 0.47
COL16A1-214ENST00000488128 RNF17Q9BXT8 1623 aaKnown RBP18■□□□□ 0.47
COL16A1-214ENST00000488128 ARAP3Q8WWN8 1544 aa18■□□□□ 0.47
COL16A1-214ENST00000488128 FSD2A1L4K1 749 aa18■□□□□ 0.47
COL16A1-214ENST00000488128 HSP90AA1P07900 732 aaKnown RBP18■□□□□ 0.47
COL16A1-214ENST00000488128 CDCA8Q53HL2 280 aa18■□□□□ 0.47
COL16A1-214ENST00000488128 C22orf23Q9BZE7 217 aa18■□□□□ 0.47
COL16A1-214ENST00000488128 NPM1P06748 294 aaKnown RBP eCLIP18■□□□□ 0.47
COL16A1-214ENST00000488128 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
COL16A1-214ENST00000488128 ZMYND15Q9H091 742 aa18■□□□□ 0.47
COL16A1-214ENST00000488128 ERBB4Q15303 1308 aa17.99■□□□□ 0.47
COL16A1-214ENST00000488128 TCP11L2Q8N4U5 519 aa17.98■□□□□ 0.47
COL16A1-214ENST00000488128 SPHKAPQ2M3C7 1700 aa17.98■□□□□ 0.47
COL16A1-214ENST00000488128 ASXL1Q8IXJ9 1541 aa17.98■□□□□ 0.47
COL16A1-214ENST00000488128 CLCN1P35523 988 aa17.98■□□□□ 0.47
COL16A1-214ENST00000488128 MYH16Q9H6N6 1097 aa17.98■□□□□ 0.47
COL16A1-214ENST00000488128 SENP3Q9H4L4 574 aaPredicted RBP17.97■□□□□ 0.47
COL16A1-214ENST00000488128 ABCA9Q8IUA7 1624 aa17.97■□□□□ 0.47
COL16A1-214ENST00000488128 INO80Q9ULG1 1556 aaPredicted RBP17.97■□□□□ 0.47
COL16A1-214ENST00000488128 PIK3C2GO75747 1445 aa17.96■□□□□ 0.47
COL16A1-214ENST00000488128 RWDD1Q9H446 243 aaPredicted RBP17.96■□□□□ 0.47
COL16A1-214ENST00000488128 GRPEL1Q9HAV7 217 aa17.96■□□□□ 0.47
COL16A1-214ENST00000488128 CHMP5Q9NZZ3 219 aa17.96■□□□□ 0.47
COL16A1-214ENST00000488128 GLIPR1L2Q4G1C9 344 aa17.96■□□□□ 0.47
COL16A1-214ENST00000488128 STAC3Q96MF2 364 aa17.96■□□□□ 0.47
COL16A1-214ENST00000488128 TET3O43151 1660 aa17.96■□□□□ 0.46
COL16A1-214ENST00000488128 DEPDC5O75140 1603 aa17.95■□□□□ 0.46
COL16A1-214ENST00000488128 NUTM2DQ5VT03 806 aaPredicted RBP17.94■□□□□ 0.46
COL16A1-214ENST00000488128 FTSJ3Q8IY81 847 aaKnown RBP17.94■□□□□ 0.46
COL16A1-214ENST00000488128 IQGAP1P46940 1657 aa17.94■□□□□ 0.46
COL16A1-214ENST00000488128 TSR2Q969E8 191 aaKnown RBP17.94■□□□□ 0.46
COL16A1-214ENST00000488128 CEP152O94986 1710 aa17.94■□□□□ 0.46
COL16A1-214ENST00000488128 TRAK1Q9UPV9 953 aa17.93■□□□□ 0.46
COL16A1-214ENST00000488128 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
COL16A1-214ENST00000488128 GAS2L3Q86XJ1 694 aa17.93■□□□□ 0.46
COL16A1-214ENST00000488128 VWDEQ8N2E2 1590 aa17.93■□□□□ 0.46
COL16A1-214ENST00000488128 ESPNB1AK53 854 aa17.93■□□□□ 0.46
COL16A1-214ENST00000488128 MRE11P49959 708 aa17.93■□□□□ 0.46
COL16A1-214ENST00000488128 TMEM132EQ6IEE7 984 aa17.92■□□□□ 0.46
COL16A1-214ENST00000488128 MORC1Q86VD1 984 aa17.92■□□□□ 0.46
COL16A1-214ENST00000488128 MROH1Q8NDA8 1641 aa17.91■□□□□ 0.46
COL16A1-214ENST00000488128 HSCBQ8IWL3 235 aa17.91■□□□□ 0.46
COL16A1-214ENST00000488128 OSCARQ8IYS5 282 aa17.91■□□□□ 0.46
COL16A1-214ENST00000488128 TRIM44Q96DX7 344 aaPredicted RBP17.91■□□□□ 0.46
COL16A1-214ENST00000488128 RAPGEF3O95398 923 aa17.9■□□□□ 0.46
COL16A1-214ENST00000488128 NOS1P29475 1434 aa17.9■□□□□ 0.46
COL16A1-214ENST00000488128 ITPRIPQ8IWB1 547 aa17.89■□□□□ 0.46
COL16A1-214ENST00000488128 SLC12A5Q9H2X9 1139 aa17.89■□□□□ 0.45
COL16A1-214ENST00000488128 CD109Q6YHK3 1445 aa17.89■□□□□ 0.45
COL16A1-214ENST00000488128 MVPQ14764 893 aaKnown RBP17.88■□□□□ 0.45
COL16A1-214ENST00000488128 TNPO1Q92973 898 aaKnown RBP17.88■□□□□ 0.45
COL16A1-214ENST00000488128 RUNDC1Q96C34 613 aa17.88■□□□□ 0.45
COL16A1-214ENST00000488128 MTHFSP49914 203 aa17.87■□□□□ 0.45
COL16A1-214ENST00000488128 ERVK-7P63135 1459 aa17.87■□□□□ 0.45
COL16A1-214ENST00000488128 ZNF518AQ6AHZ1 1483 aa17.87■□□□□ 0.45
COL16A1-214ENST00000488128 SYNMO15061 1565 aa17.87■□□□□ 0.45
COL16A1-214ENST00000488128 KIDINS220Q9ULH0 1771 aa17.87■□□□□ 0.45
COL16A1-214ENST00000488128 EFCAB6Q5THR3 1501 aa17.86■□□□□ 0.45
COL16A1-214ENST00000488128 SMC4Q9NTJ3 1288 aa17.86■□□□□ 0.45
COL16A1-214ENST00000488128 DZIP1LQ8IYY4 767 aaKnown RBP17.86■□□□□ 0.45
COL16A1-214ENST00000488128 LNPKQ9C0E8 428 aa17.86■□□□□ 0.45
COL16A1-214ENST00000488128 U2AF1L5P0DN76 240 aaPredicted RBP17.85■□□□□ 0.45
COL16A1-214ENST00000488128 U2AF1Q01081 240 aaKnown RBP eCLIP17.85■□□□□ 0.45
COL16A1-214ENST00000488128 ABCA6Q8N139 1617 aa17.85■□□□□ 0.45
COL16A1-214ENST00000488128 PPRC1Q5VV67 1664 aaKnown RBP17.85■□□□□ 0.45
COL16A1-214ENST00000488128 HSP90AB1P08238 724 aaKnown RBP17.85■□□□□ 0.45
COL16A1-214ENST00000488128 ZKSCAN2Q63HK3 967 aa17.85■□□□□ 0.45
COL16A1-214ENST00000488128 ZNF692Q9BU19 519 aaPredicted RBP17.85■□□□□ 0.45
COL16A1-214ENST00000488128 MAP3K4Q9Y6R4 1608 aa17.84■□□□□ 0.45
COL16A1-214ENST00000488128 NPATQ14207 1427 aa17.84■□□□□ 0.45
COL16A1-214ENST00000488128 RRP9O43818 475 aaKnown RBP17.84■□□□□ 0.45
COL16A1-214ENST00000488128 DDX11L8A8MPP1 907 aa17.83■□□□□ 0.45
COL16A1-214ENST00000488128 CD2BP2O95400 341 aaKnown RBP17.83■□□□□ 0.45
COL16A1-214ENST00000488128 RBM42Q9BTD8 480 aaKnown RBP17.83■□□□□ 0.45
COL16A1-214ENST00000488128 NINLQ9Y2I6 1382 aa17.83■□□□□ 0.44
COL16A1-214ENST00000488128 MYOM2P54296 1465 aa17.83■□□□□ 0.44
COL16A1-214ENST00000488128 TRIM27P14373 513 aa17.83■□□□□ 0.44
COL16A1-214ENST00000488128 CFAP65Q6ZU64 1925 aaKnown RBP17.82■□□□□ 0.44
COL16A1-214ENST00000488128 EXOSC9Q06265 439 aaKnown RBP17.82■□□□□ 0.44
COL16A1-214ENST00000488128 MYOM1P52179 1685 aa17.82■□□□□ 0.44
COL16A1-214ENST00000488128 ARID3AQ99856 593 aa17.82■□□□□ 0.44
COL16A1-214ENST00000488128 POGZQ7Z3K3 1410 aa17.81■□□□□ 0.44
COL16A1-214ENST00000488128 MROH2AA6NES4 1674 aa17.81■□□□□ 0.44
COL16A1-214ENST00000488128 SAFB2Q14151 953 aaKnown RBP eCLIP17.81■□□□□ 0.44
COL16A1-214ENST00000488128 C14orf93Q9H972 538 aaKnown RBP17.8■□□□□ 0.44
COL16A1-214ENST00000488128 U2SURPO15042 1029 aaKnown RBP17.8■□□□□ 0.44
COL16A1-214ENST00000488128 SSH1Q8WYL5 1049 aa17.8■□□□□ 0.44
COL16A1-214ENST00000488128 NPC1L1Q9UHC9 1359 aa17.79■□□□□ 0.44
COL16A1-214ENST00000488128 KDM5AP29375 1690 aaKnown RBP17.79■□□□□ 0.44
COL16A1-214ENST00000488128 RBM10P98175 930 aaKnown RBP17.79■□□□□ 0.44
COL16A1-214ENST00000488128 NSD3Q9BZ95 1437 aa17.79■□□□□ 0.44
COL16A1-214ENST00000488128 NOB1Q9ULX3 412 aaKnown RBP17.79■□□□□ 0.44
COL16A1-214ENST00000488128 TMEM57Q8N5G2 664 aa17.78■□□□□ 0.44
COL16A1-214ENST00000488128 KIF1BO60333 1816 aa17.78■□□□□ 0.44
COL16A1-214ENST00000488128 SLC24A1O60721 1099 aa17.78■□□□□ 0.44
COL16A1-214ENST00000488128 WDR63Q8IWG1 891 aa17.78■□□□□ 0.44
COL16A1-214ENST00000488128 KIAA1211Q6ZU35 1233 aa17.77■□□□□ 0.44
COL16A1-214ENST00000488128 NGEFQ8N5V2 710 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms