RNA–Protein interactions for RNA: ENST00000487688.1

BRD9-206, Transcript of bromodomain containing 9, humanhuman

TSL 5

Gene BRD9, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-206ENST00000487688 PCGF6Q9BYE7 350 aa18.69■□□□□ 0.58
BRD9-206ENST00000487688 COL16A1Q07092 1604 aaPredicted RBP18.68■□□□□ 0.58
BRD9-206ENST00000487688 DCAF11Q8TEB1 546 aa18.68■□□□□ 0.58
BRD9-206ENST00000487688 KDM2AQ9Y2K7 1162 aa18.68■□□□□ 0.58
BRD9-206ENST00000487688 POTEAQ6S8J7 498 aa18.67■□□□□ 0.58
BRD9-206ENST00000487688 DDX17Q92841 729 aaKnown RBP18.67■□□□□ 0.58
BRD9-206ENST00000487688 TECPR2O15040 1411 aa18.66■□□□□ 0.58
BRD9-206ENST00000487688 YTHDC2Q9H6S0 1430 aaKnown RBP18.66■□□□□ 0.58
BRD9-206ENST00000487688 POGKQ9P215 609 aa18.66■□□□□ 0.58
BRD9-206ENST00000487688 NPHP3Q7Z494 1330 aa18.65■□□□□ 0.58
BRD9-206ENST00000487688 MYOM2P54296 1465 aa18.65■□□□□ 0.58
BRD9-206ENST00000487688 SETD1AO15047 1707 aaKnown RBP18.63■□□□□ 0.57
BRD9-206ENST00000487688 NUTM2FA1L443 756 aa18.62■□□□□ 0.57
BRD9-206ENST00000487688 SOS2Q07890 1332 aaPredicted RBP18.62■□□□□ 0.57
BRD9-206ENST00000487688 NALCNQ8IZF0 1738 aa18.62■□□□□ 0.57
BRD9-206ENST00000487688 NRXN1Q9ULB1 1477 aa18.61■□□□□ 0.57
BRD9-206ENST00000487688 PRAM1Q96QH2 718 aa18.61■□□□□ 0.57
BRD9-206ENST00000487688 PNPLA6Q8IY17 1366 aa18.6■□□□□ 0.57
BRD9-206ENST00000487688 FOXO3O43524 673 aa18.6■□□□□ 0.57
BRD9-206ENST00000487688 PLEKHH1Q9ULM0 1364 aa18.59■□□□□ 0.57
BRD9-206ENST00000487688 SAFB2Q14151 953 aaKnown RBP eCLIP18.59■□□□□ 0.57
BRD9-206ENST00000487688 C8orf37Q96NL8 207 aa18.59■□□□□ 0.57
BRD9-206ENST00000487688 RXRBP28702 533 aa18.58■□□□□ 0.56
BRD9-206ENST00000487688 NGLY1Q96IV0 654 aa18.58■□□□□ 0.56
BRD9-206ENST00000487688 TRAK1Q9UPV9 953 aa18.58■□□□□ 0.56
BRD9-206ENST00000487688 LRP6O75581 1613 aa18.58■□□□□ 0.56
BRD9-206ENST00000487688 CDC42BPGQ6DT37 1551 aa18.58■□□□□ 0.56
BRD9-206ENST00000487688 SHPRHQ149N8 1683 aa18.57■□□□□ 0.56
BRD9-206ENST00000487688 ADAMTS2O95450 1211 aa18.57■□□□□ 0.56
BRD9-206ENST00000487688 SIN3AQ96ST3 1273 aa18.57■□□□□ 0.56
BRD9-206ENST00000487688 LAMC1P11047 1609 aa18.56■□□□□ 0.56
BRD9-206ENST00000487688 AFF2P51816 1311 aa18.56■□□□□ 0.56
BRD9-206ENST00000487688 PSME1Q06323 249 aa18.56■□□□□ 0.56
BRD9-206ENST00000487688 NHSL1Q5SYE7 1610 aa18.56■□□□□ 0.56
BRD9-206ENST00000487688 NEUROD1Q13562 356 aa18.55■□□□□ 0.56
BRD9-206ENST00000487688 XPCQ01831 940 aaPredicted RBP18.54■□□□□ 0.56
BRD9-206ENST00000487688 PHF8Q9UPP1 1060 aa18.54■□□□□ 0.56
BRD9-206ENST00000487688 KRT28Q7Z3Y7 464 aa18.53■□□□□ 0.56
BRD9-206ENST00000487688 QTRT2Q9H974 415 aaKnown RBP18.52■□□□□ 0.56
BRD9-206ENST00000487688 EIF3AQ14152 1382 aaKnown RBP18.51■□□□□ 0.55
BRD9-206ENST00000487688 KNDC1Q76NI1 1749 aa18.51■□□□□ 0.55
BRD9-206ENST00000487688 DLC1Q96QB1 1528 aa18.5■□□□□ 0.55
BRD9-206ENST00000487688 MINK1Q8N4C8 1332 aaPredicted RBP18.49■□□□□ 0.55
BRD9-206ENST00000487688 HAP1P54257 671 aaPredicted RBP18.49■□□□□ 0.55
BRD9-206ENST00000487688 L3MBTL2Q969R5 705 aa18.49■□□□□ 0.55
BRD9-206ENST00000487688 HIRIP3Q9BW71 556 aaPredicted RBP18.49■□□□□ 0.55
BRD9-206ENST00000487688 RBM6P78332 1123 aaKnown RBP18.48■□□□□ 0.55
BRD9-206ENST00000487688 USP21Q9UK80 565 aa18.48■□□□□ 0.55
BRD9-206ENST00000487688 SPATA31A3Q5VYP0 1347 aa18.47■□□□□ 0.55
BRD9-206ENST00000487688 WASLO00401 505 aaPredicted RBP18.46■□□□□ 0.55
BRD9-206ENST00000487688 LMOD2Q6P5Q4 547 aa18.46■□□□□ 0.55
BRD9-206ENST00000487688 TRPC5Q9UL62 973 aaPredicted RBP18.46■□□□□ 0.55
BRD9-206ENST00000487688 PXDNQ92626 1479 aa18.46■□□□□ 0.54
BRD9-206ENST00000487688 TONSLQ96HA7 1378 aa18.45■□□□□ 0.54
BRD9-206ENST00000487688 FNBP4Q8N3X1 1017 aaPredicted RBP18.45■□□□□ 0.54
BRD9-206ENST00000487688 PMFBP1Q8TBY8 1022 aa18.45■□□□□ 0.54
BRD9-206ENST00000487688 ANKARQ7Z5J8 1434 aa18.45■□□□□ 0.54
BRD9-206ENST00000487688 ADGRB1O14514 1584 aa18.45■□□□□ 0.54
BRD9-206ENST00000487688 GPRASP1Q5JY77 1395 aa18.43■□□□□ 0.54
BRD9-206ENST00000487688 KIAA1210Q9ULL0 1709 aa18.43■□□□□ 0.54
BRD9-206ENST00000487688 NGDNQ8NEJ9 315 aaKnown RBP18.42■□□□□ 0.54
BRD9-206ENST00000487688 CLSPNQ9HAW4 1339 aa18.42■□□□□ 0.54
BRD9-206ENST00000487688 SBNO1A3KN83 1393 aa18.42■□□□□ 0.54
BRD9-206ENST00000487688 FMN2Q9NZ56 1722 aa18.41■□□□□ 0.54
BRD9-206ENST00000487688 ARHGEF10O15013 1369 aa18.41■□□□□ 0.54
BRD9-206ENST00000487688 CDK12Q9NYV4 1490 aaPredicted RBP18.4■□□□□ 0.54
BRD9-206ENST00000487688 KIF1AQ12756 1690 aa18.4■□□□□ 0.54
BRD9-206ENST00000487688 CCER1Q8TC90 406 aaPredicted RBP18.39■□□□□ 0.53
BRD9-206ENST00000487688 TNS3Q68CZ2 1445 aa18.39■□□□□ 0.53
BRD9-206ENST00000487688 PLEKHG5O94827 1062 aa18.38■□□□□ 0.53
BRD9-206ENST00000487688 NBPF1Q3BBV0 1214 aa18.38■□□□□ 0.53
BRD9-206ENST00000487688 NUDT16Q96DE0 195 aaKnown RBP18.38■□□□□ 0.53
BRD9-206ENST00000487688 CDK19Q9BWU1 502 aa18.38■□□□□ 0.53
BRD9-206ENST00000487688 PAK3O75914 559 aaPredicted RBP18.37■□□□□ 0.53
BRD9-206ENST00000487688 TRPM1Q7Z4N2 1603 aa18.36■□□□□ 0.53
BRD9-206ENST00000487688 COL22A1Q8NFW1 1626 aaPredicted RBP18.36■□□□□ 0.53
BRD9-206ENST00000487688 ADGRB2O60241 1585 aa18.35■□□□□ 0.53
BRD9-206ENST00000487688 PRR36Q9H6K5 1346 aa18.35■□□□□ 0.53
BRD9-206ENST00000487688 UNC5CLQ8IV45 518 aa18.35■□□□□ 0.53
BRD9-206ENST00000487688 UPF1Q92900 1129 aaKnown RBP eCLIP18.35■□□□□ 0.53
BRD9-206ENST00000487688 CCDC61Q9Y6R9 512 aa18.35■□□□□ 0.53
BRD9-206ENST00000487688 TULP4Q9NRJ4 1543 aa18.34■□□□□ 0.53
BRD9-206ENST00000487688 CENPJQ9HC77 1338 aaPredicted RBP18.34■□□□□ 0.53
BRD9-206ENST00000487688 CABLES1Q8TDN4 633 aa18.34■□□□□ 0.53
BRD9-206ENST00000487688 ARHGEF28Q8N1W1 1705 aaKnown RBP18.34■□□□□ 0.53
BRD9-206ENST00000487688 SRPK2P78362 688 aaKnown RBP18.33■□□□□ 0.52
BRD9-206ENST00000487688 GJD4Q96KN9 370 aaPredicted RBP18.33■□□□□ 0.52
BRD9-206ENST00000487688 NBPF8Q3BBV2 869 aa18.32■□□□□ 0.52
BRD9-206ENST00000487688 ATRNO75882 1429 aa18.32■□□□□ 0.52
BRD9-206ENST00000487688 ROCK2O75116 1388 aaKnown RBP18.31■□□□□ 0.52
BRD9-206ENST00000487688 CCDC9Q9Y3X0 531 aaKnown RBP18.3■□□□□ 0.52
BRD9-206ENST00000487688 BCL9LQ86UU0 1499 aa18.3■□□□□ 0.52
BRD9-206ENST00000487688 RGS12O14924 1447 aa18.29■□□□□ 0.52
BRD9-206ENST00000487688 RALGAPBQ86X10 1494 aa18.28■□□□□ 0.52
BRD9-206ENST00000487688 PLEKHG3A1L390 1219 aa18.28■□□□□ 0.52
BRD9-206ENST00000487688 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
BRD9-206ENST00000487688 ATAD2Q6PL18 1390 aa18.28■□□□□ 0.52
BRD9-206ENST00000487688 ACEP12821 1306 aa18.26■□□□□ 0.51
BRD9-206ENST00000487688 FAM83GA6ND36 823 aa18.26■□□□□ 0.51
BRD9-206ENST00000487688 VPS72Q15906 364 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms