RNA–Protein interactions for RNA: ENST00000487688.1

BRD9-206, Transcript of bromodomain containing 9, humanhuman

TSL 5

Gene BRD9, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-206ENST00000487688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.64■□□□□ 0.92e-9■■■□□ 19.1
BRD9-206ENST00000487688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.47■□□□□ 0.393e-9■■■■■ 32.1
BRD9-206ENST00000487688 TRA2AQ13595 282 aaKnown RBP eCLIP12.7□□□□□ -0.382e-8■■■■■ 37.7
BRD9-206ENST00000487688 GTF2F1P35269 517 aaKnown RBP eCLIP14.23□□□□□ -0.132e-8■■■■■ 27.7
BRD9-206ENST00000487688 EIF3HO15372 352 aaKnown RBP eCLIP12.51□□□□□ -0.413e-8■□□□□ 8.6
BRD9-206ENST00000487688 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.224e-8■■■■■ 41.9
BRD9-206ENST00000487688 PRPF4O43172 522 aaKnown RBP eCLIP12.27□□□□□ -0.456e-8■■■■■ 29.9
BRD9-206ENST00000487688 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.85□□□□□ -0.677e-8■■■■□ 20.3
BRD9-206ENST00000487688 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.8□□□□□ -0.041e-7■■□□□ 13.4
BRD9-206ENST00000487688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.71■□□□□ 0.751e-7■■■■□ 20.6
BRD9-206ENST00000487688 CPSF6Q16630 551 aaKnown RBP eCLIP12.12□□□□□ -0.472e-7■■■□□ 16.2
BRD9-206ENST00000487688 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.03□□□□□ -0.482e-7■■■■□ 21.2
BRD9-206ENST00000487688 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.99□□□□□ -0.172e-7■□□□□ 10.8
BRD9-206ENST00000487688 RBFOX2O43251 390 aaKnown RBP eCLIP10.06□□□□□ -0.82e-7■■■□□ 14.7
BRD9-206ENST00000487688 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.37□□□□□ -0.273e-7■■■■■ 45.6
BRD9-206ENST00000487688 ZNF622Q969S3 477 aaKnown RBP eCLIP16.8■□□□□ 0.283e-7■■■■□ 24.3
BRD9-206ENST00000487688 PPIGQ13427 754 aaKnown RBP eCLIP14.87□□□□□ -0.033e-7■■□□□ 14
BRD9-206ENST00000487688 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.53■□□□□ 0.084e-7■□□□□ 10
BRD9-206ENST00000487688 PUM1Q14671 1186 aaKnown RBP eCLIP13.51□□□□□ -0.254e-7■■□□□ 11.9
BRD9-206ENST00000487688 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.94□□□□□ -0.54e-7■□□□□ 10.2
BRD9-206ENST00000487688 SRSF1Q07955 248 aaKnown RBP eCLIP12.1□□□□□ -0.471e-6■■■■□ 23.2
BRD9-206ENST00000487688 EFTUD2Q15029 972 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■■■■■ 30.3
BRD9-206ENST00000487688 PTBP1P26599 531 aaKnown RBP eCLIP10.04□□□□□ -0.85e-6■□□□□ 8
BRD9-206ENST00000487688 FXR2P51116 673 aaKnown RBP eCLIP14.35□□□□□ -0.115e-6■■■□□ 14.9
BRD9-206ENST00000487688 DDX3XO00571 662 aaKnown RBP eCLIP13.3□□□□□ -0.286e-6■■□□□ 14.5
BRD9-206ENST00000487688 PCBP2Q15366 365 aaKnown RBP eCLIP12.19□□□□□ -0.468e-6■■■■□ 24
Retrieved 26 of 26 RNA–protein pairs in 7.2 ms