RNA–Protein interactions for RNA: ENST00000487678.1

PDCD10-213, Transcript of programmed cell death 10, humanhuman

TSL 3

Gene PDCD10, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-213ENST00000487678 KDM4AO75164 1064 aa13.62□□□□□ -0.23
PDCD10-213ENST00000487678 AVPP01185 164 aa13.61□□□□□ -0.23
PDCD10-213ENST00000487678 MMP16P51512 607 aa13.61□□□□□ -0.23
PDCD10-213ENST00000487678 GRIPAP1Q4V328 841 aa13.6□□□□□ -0.23
PDCD10-213ENST00000487678 TRIM32Q13049 653 aa13.59□□□□□ -0.23
PDCD10-213ENST00000487678 CRIPAKQ8N1N5 446 aa13.59□□□□□ -0.23
PDCD10-213ENST00000487678 CCDC102AQ96A19 550 aa13.59□□□□□ -0.23
PDCD10-213ENST00000487678 GMPR2Q9P2T1 348 aaKnown RBP13.59□□□□□ -0.23
PDCD10-213ENST00000487678 ZBTB24O43167 697 aaPredicted RBP13.58□□□□□ -0.24
PDCD10-213ENST00000487678 SYMPKQ92797 1274 aaKnown RBP13.58□□□□□ -0.24
PDCD10-213ENST00000487678 USB1Q9BQ65 265 aaKnown RBP13.58□□□□□ -0.24
PDCD10-213ENST00000487678 DXOO77932 396 aaKnown RBP13.57□□□□□ -0.24
PDCD10-213ENST00000487678 Q3C1V9 767 aa13.57□□□□□ -0.24
PDCD10-213ENST00000487678 LCE2AQ5TA79 106 aaPredicted RBP13.57□□□□□ -0.24
PDCD10-213ENST00000487678 SMPD1P17405 629 aa13.56□□□□□ -0.24
PDCD10-213ENST00000487678 TTC24A2A3L6 582 aaPredicted RBP13.55□□□□□ -0.24
PDCD10-213ENST00000487678 J3QL48 77 aa13.55□□□□□ -0.24
PDCD10-213ENST00000487678 AXIN1O15169 862 aa13.55□□□□□ -0.24
PDCD10-213ENST00000487678 HOXA2O43364 376 aa13.55□□□□□ -0.24
PDCD10-213ENST00000487678 MRGPRX2Q96LB1 330 aa13.55□□□□□ -0.24
PDCD10-213ENST00000487678 WNT7AO00755 349 aa13.54□□□□□ -0.24
PDCD10-213ENST00000487678 MINK1Q8N4C8 1332 aaPredicted RBP13.54□□□□□ -0.24
PDCD10-213ENST00000487678 REPIN1Q9BWE0 567 aaKnown RBP13.53□□□□□ -0.24
PDCD10-213ENST00000487678 SKOR1P84550 965 aa13.52□□□□□ -0.25
PDCD10-213ENST00000487678 CCDC24Q8N4L8 307 aa13.52□□□□□ -0.25
PDCD10-213ENST00000487678 TREML4Q6UXN2 200 aa13.51□□□□□ -0.25
PDCD10-213ENST00000487678 FAM217BQ9NTX9 383 aaPredicted RBP13.51□□□□□ -0.25
PDCD10-213ENST00000487678 SNIP1Q8TAD8 396 aaKnown RBP13.5□□□□□ -0.25
PDCD10-213ENST00000487678 SMCPP49901 116 aaPredicted RBP13.49□□□□□ -0.25
PDCD10-213ENST00000487678 HPS1Q92902 700 aa13.48□□□□□ -0.25
PDCD10-213ENST00000487678 C11orf95C9JLR9 678 aaPredicted RBP13.47□□□□□ -0.25
PDCD10-213ENST00000487678 USP46P62068 366 aa13.47□□□□□ -0.25
PDCD10-213ENST00000487678 CTC1Q2NKJ3 1217 aa13.47□□□□□ -0.25
PDCD10-213ENST00000487678 GPCPD1Q9NPB8 672 aa13.47□□□□□ -0.25
PDCD10-213ENST00000487678 PTCRAQ6ISU1 281 aaPredicted RBP13.46□□□□□ -0.25
PDCD10-213ENST00000487678 VSIG10Q8N0Z9 540 aa13.46□□□□□ -0.25
PDCD10-213ENST00000487678 PCDHGC3Q9UN70 934 aa13.45□□□□□ -0.26
PDCD10-213ENST00000487678 RC3H1Q5TC82 1133 aaKnown RBP13.44□□□□□ -0.26
PDCD10-213ENST00000487678 SNRPBP14678 240 aaKnown RBP13.43□□□□□ -0.26
PDCD10-213ENST00000487678 JUNDP17535 347 aa13.43□□□□□ -0.26
PDCD10-213ENST00000487678 CLCN1P35523 988 aa13.43□□□□□ -0.26
PDCD10-213ENST00000487678 ATP13A2Q9NQ11 1180 aa13.43□□□□□ -0.26
PDCD10-213ENST00000487678 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDCD10-213ENST00000487678 TULP1O00294 542 aaPredicted RBP13.41□□□□□ -0.26
PDCD10-213ENST00000487678 LCE2CQ5TA81 110 aa13.41□□□□□ -0.26
PDCD10-213ENST00000487678 NDUFV2P19404 249 aa13.38□□□□□ -0.27
PDCD10-213ENST00000487678 NFX1Q12986 1120 aaKnown RBP13.38□□□□□ -0.27
PDCD10-213ENST00000487678 NUTM1Q86Y26 1132 aa13.38□□□□□ -0.27
PDCD10-213ENST00000487678 FDX1P10109 184 aa13.36□□□□□ -0.27
PDCD10-213ENST00000487678 RETREG3Q86VR2 466 aa13.36□□□□□ -0.27
PDCD10-213ENST00000487678 NUDT12Q9BQG2 462 aa13.36□□□□□ -0.27
PDCD10-213ENST00000487678 WFS1O76024 890 aa13.35□□□□□ -0.27
PDCD10-213ENST00000487678 SSTR3P32745 418 aaPredicted RBP13.35□□□□□ -0.27
PDCD10-213ENST00000487678 WNT7BP56706 349 aa13.35□□□□□ -0.27
PDCD10-213ENST00000487678 SPIRE2Q8WWL2 714 aa13.35□□□□□ -0.27
PDCD10-213ENST00000487678 ALDH1A1P00352 501 aa13.34□□□□□ -0.27
PDCD10-213ENST00000487678 KRI1Q8N9T8 703 aaKnown RBP13.34□□□□□ -0.27
PDCD10-213ENST00000487678 C6orf229H3BNL8 230 aa13.33□□□□□ -0.28
PDCD10-213ENST00000487678 SIAH2O43255 324 aa13.33□□□□□ -0.28
PDCD10-213ENST00000487678 MOXD2PA6NHM9 499 aa13.32□□□□□ -0.28
PDCD10-213ENST00000487678 TRIM47Q96LD4 638 aa13.31□□□□□ -0.28
PDCD10-213ENST00000487678 SH3BP2P78314 561 aa13.3□□□□□ -0.28
PDCD10-213ENST00000487678 MS4A1P11836 297 aa13.27□□□□□ -0.29
PDCD10-213ENST00000487678 BARGINQ6ZT62 677 aa13.27□□□□□ -0.29
PDCD10-213ENST00000487678 EHBP1Q8NDI1 1231 aa13.27□□□□□ -0.29
PDCD10-213ENST00000487678 ZMYND10O75800 440 aa13.26□□□□□ -0.29
PDCD10-213ENST00000487678 CCNYL3P0C7X3 344 aa13.26□□□□□ -0.29
PDCD10-213ENST00000487678 BMP1P13497 986 aa13.26□□□□□ -0.29
PDCD10-213ENST00000487678 TTLL12Q14166 644 aaPredicted RBP13.26□□□□□ -0.29
PDCD10-213ENST00000487678 LINC01559Q495D7 138 aa13.26□□□□□ -0.29
PDCD10-213ENST00000487678 GIGYF2Q6Y7W6 1299 aaKnown RBP13.24□□□□□ -0.29
PDCD10-213ENST00000487678 TRIM46Q7Z4K8 759 aa13.24□□□□□ -0.29
PDCD10-213ENST00000487678 PRR7Q8TB68 274 aa13.24□□□□□ -0.29
PDCD10-213ENST00000487678 ZC3H15Q8WU90 426 aaKnown RBP13.24□□□□□ -0.29
PDCD10-213ENST00000487678 UNC93B1Q9H1C4 597 aa13.24□□□□□ -0.29
PDCD10-213ENST00000487678 TERTO14746 1132 aaKnown RBP13.23□□□□□ -0.29
PDCD10-213ENST00000487678 BAP1Q92560 729 aa13.23□□□□□ -0.29
PDCD10-213ENST00000487678 TLL2Q9Y6L7 1015 aa13.23□□□□□ -0.29
PDCD10-213ENST00000487678 AMHR2Q16671 573 aa13.22□□□□□ -0.29
PDCD10-213ENST00000487678 SENP2Q9HC62 589 aa13.22□□□□□ -0.29
PDCD10-213ENST00000487678 EVA1BQ9NVM1 165 aa13.22□□□□□ -0.29
PDCD10-213ENST00000487678 PTPRNQ16849 979 aa13.2□□□□□ -0.3
PDCD10-213ENST00000487678 BEGAINQ9BUH8 593 aa13.2□□□□□ -0.3
PDCD10-213ENST00000487678 WIPF1O43516 503 aa13.19□□□□□ -0.3
PDCD10-213ENST00000487678 PCDHB15Q9Y5E8 787 aa13.19□□□□□ -0.3
PDCD10-213ENST00000487678 KCNH2Q12809 1159 aa13.18□□□□□ -0.3
PDCD10-213ENST00000487678 WASF2Q9Y6W5 498 aa13.18□□□□□ -0.3
PDCD10-213ENST00000487678 CAPN5O15484 640 aaPredicted RBP13.17□□□□□ -0.3
PDCD10-213ENST00000487678 MTMR2Q13614 643 aa13.17□□□□□ -0.3
PDCD10-213ENST00000487678 TBC1D2Q9BYX2 928 aa13.17□□□□□ -0.3
PDCD10-213ENST00000487678 PARP9Q8IXQ6 854 aa13.16□□□□□ -0.3
PDCD10-213ENST00000487678 CFAP99D6REC4 459 aa13.15□□□□□ -0.3
PDCD10-213ENST00000487678 ZNF511Q8NB15 262 aa13.15□□□□□ -0.3
PDCD10-213ENST00000487678 KIFC2Q96AC6 838 aa13.15□□□□□ -0.3
PDCD10-213ENST00000487678 VEGFBP49765 207 aa13.14□□□□□ -0.31
PDCD10-213ENST00000487678 RSBN1LQ6PCB5 846 aaPredicted RBP13.14□□□□□ -0.31
PDCD10-213ENST00000487678 TRIM66O15016 1216 aa13.1□□□□□ -0.31
PDCD10-213ENST00000487678 DESI1Q6ICB0 168 aa13.1□□□□□ -0.31
PDCD10-213ENST00000487678 CABLES1Q8TDN4 633 aa13.1□□□□□ -0.31
PDCD10-213ENST00000487678 MAP10Q9P2G4 905 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms