RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 PRAM1Q96QH2 718 aa27.51■■■□□ 2
PHF1-209ENST00000487667 ARHGAP23Q9P227 1491 aa27.5■■□□□ 1.99
PHF1-209ENST00000487667 ATAD2Q6PL18 1390 aa27.5■■□□□ 1.99
PHF1-209ENST00000487667 KNDC1Q76NI1 1749 aa27.48■■□□□ 1.99
PHF1-209ENST00000487667 TECPR2O15040 1411 aa27.47■■□□□ 1.99
PHF1-209ENST00000487667 INSRP06213 1382 aa27.47■■□□□ 1.99
PHF1-209ENST00000487667 FAM135BQ49AJ0 1406 aa27.47■■□□□ 1.99
PHF1-209ENST00000487667 ZBED9Q6R2W3 1325 aa27.46■■□□□ 1.99
PHF1-209ENST00000487667 BCANQ96GW7 911 aa27.45■■□□□ 1.98
PHF1-209ENST00000487667 USP32Q8NFA0 1604 aa27.44■■□□□ 1.98
PHF1-209ENST00000487667 ANKRD36BQ8N2N9 1353 aa27.44■■□□□ 1.98
PHF1-209ENST00000487667 KDM4FA0A1W2PPD8 638 aa27.44■■□□□ 1.98
PHF1-209ENST00000487667 TXNDC2Q86VQ3 553 aa27.44■■□□□ 1.98
PHF1-209ENST00000487667 SRPK2P78362 688 aaKnown RBP27.42■■□□□ 1.98
PHF1-209ENST00000487667 METP08581 1390 aa27.42■■□□□ 1.98
PHF1-209ENST00000487667 CPS1P31327 1500 aa27.41■■□□□ 1.98
PHF1-209ENST00000487667 ADAMTS13Q76LX8 1427 aa27.41■■□□□ 1.98
PHF1-209ENST00000487667 SAFB2Q14151 953 aaKnown RBP eCLIP27.41■■□□□ 1.98
PHF1-209ENST00000487667 CARD14Q9BXL6 1004 aa27.41■■□□□ 1.98
PHF1-209ENST00000487667 SLC12A5Q9H2X9 1139 aa27.4■■□□□ 1.98
PHF1-209ENST00000487667 CEP170BQ9Y4F5 1589 aaPredicted RBP27.4■■□□□ 1.98
PHF1-209ENST00000487667 SETD1BQ9UPS6 1966 aaKnown RBP27.4■■□□□ 1.98
PHF1-209ENST00000487667 LTKP29376 864 aa27.39■■□□□ 1.98
PHF1-209ENST00000487667 DIP2AQ14689 1571 aa27.39■■□□□ 1.98
PHF1-209ENST00000487667 MINK1Q8N4C8 1332 aaPredicted RBP27.39■■□□□ 1.98
PHF1-209ENST00000487667 NSD2O96028 1365 aa27.39■■□□□ 1.98
PHF1-209ENST00000487667 MED14O60244 1454 aa27.38■■□□□ 1.97
PHF1-209ENST00000487667 PPP2R1AP30153 589 aa27.38■■□□□ 1.97
PHF1-209ENST00000487667 CABP2Q9NPB3 220 aa27.38■■□□□ 1.97
PHF1-209ENST00000487667 NSD3Q9BZ95 1437 aa27.38■■□□□ 1.97
PHF1-209ENST00000487667 CGNL1Q0VF96 1302 aa27.37■■□□□ 1.97
PHF1-209ENST00000487667 TERF2IPQ9NYB0 399 aa27.36■■□□□ 1.97
PHF1-209ENST00000487667 TBX22Q9Y458 520 aa27.35■■□□□ 1.97
PHF1-209ENST00000487667 CDK19Q9BWU1 502 aa27.34■■□□□ 1.97
PHF1-209ENST00000487667 ZNF142P52746 1687 aaPredicted RBP27.33■■□□□ 1.97
PHF1-209ENST00000487667 WAPLQ7Z5K2 1190 aa27.3■■□□□ 1.96
PHF1-209ENST00000487667 HDGFL2Q7Z4V5 671 aaPredicted RBP27.29■■□□□ 1.96
PHF1-209ENST00000487667 PLEKHH1Q9ULM0 1364 aa27.28■■□□□ 1.96
PHF1-209ENST00000487667 PIK3R4Q99570 1358 aa27.28■■□□□ 1.96
PHF1-209ENST00000487667 WASLO00401 505 aaPredicted RBP27.28■■□□□ 1.96
PHF1-209ENST00000487667 MORC1Q86VD1 984 aa27.27■■□□□ 1.96
PHF1-209ENST00000487667 ATP7BP35670 1465 aa27.26■■□□□ 1.96
PHF1-209ENST00000487667 ANKLE2Q86XL3 938 aa27.26■■□□□ 1.95
PHF1-209ENST00000487667 A0A1W2PP64 1363 aa27.26■■□□□ 1.95
PHF1-209ENST00000487667 ADGRB2O60241 1585 aa27.24■■□□□ 1.95
PHF1-209ENST00000487667 PTCH1Q13635 1447 aa27.24■■□□□ 1.95
PHF1-209ENST00000487667 WDR43Q15061 677 aaKnown RBP eCLIP27.24■■□□□ 1.95
PHF1-209ENST00000487667 BLMP54132 1417 aaPredicted RBP27.23■■□□□ 1.95
PHF1-209ENST00000487667 SLC26A8Q96RN1 970 aa27.22■■□□□ 1.95
PHF1-209ENST00000487667 ROBO2Q9HCK4 1378 aa27.21■■□□□ 1.95
PHF1-209ENST00000487667 POLR3AO14802 1390 aaPredicted RBP27.2■■□□□ 1.95
PHF1-209ENST00000487667 CD163L1Q9NR16 1453 aa27.2■■□□□ 1.94
PHF1-209ENST00000487667 NEFLP07196 543 aa27.19■■□□□ 1.94
PHF1-209ENST00000487667 CABP1Q9NZU7 370 aa27.18■■□□□ 1.94
PHF1-209ENST00000487667 AMOTL2Q9Y2J4 779 aa27.17■■□□□ 1.94
PHF1-209ENST00000487667 PTPRUQ92729 1446 aa27.17■■□□□ 1.94
PHF1-209ENST00000487667 CCDC61Q9Y6R9 512 aa27.16■■□□□ 1.94
PHF1-209ENST00000487667 PDE3BQ13370 1112 aa27.16■■□□□ 1.94
PHF1-209ENST00000487667 SMG6Q86US8 1419 aaKnown RBP27.15■■□□□ 1.94
PHF1-209ENST00000487667 ANKRD26Q9UPS8 1709 aa27.14■■□□□ 1.94
PHF1-209ENST00000487667 PPIP5K1Q6PFW1 1433 aa27.14■■□□□ 1.93
PHF1-209ENST00000487667 NUDT16Q96DE0 195 aaKnown RBP27.14■■□□□ 1.93
PHF1-209ENST00000487667 NCKAP5LQ9HCH0 1330 aa27.13■■□□□ 1.93
PHF1-209ENST00000487667 CFAP53Q96M91 514 aa27.13■■□□□ 1.93
PHF1-209ENST00000487667 XRN1Q8IZH2 1706 aaKnown RBP27.13■■□□□ 1.93
PHF1-209ENST00000487667 CPSF1Q10570 1443 aaKnown RBP27.11■■□□□ 1.93
PHF1-209ENST00000487667 ZNF692Q9BU19 519 aaPredicted RBP27.11■■□□□ 1.93
PHF1-209ENST00000487667 ADAMTS8Q9UP79 889 aa27.11■■□□□ 1.93
PHF1-209ENST00000487667 HSPA2P54652 639 aa27.1■■□□□ 1.93
PHF1-209ENST00000487667 EDC4Q6P2E9 1401 aaKnown RBP27.1■■□□□ 1.93
PHF1-209ENST00000487667 CDC42BPGQ6DT37 1551 aa27.1■■□□□ 1.93
PHF1-209ENST00000487667 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.1■■□□□ 1.93
PHF1-209ENST00000487667 NGEFQ8N5V2 710 aa27.09■■□□□ 1.93
PHF1-209ENST00000487667 NUDCQ9Y266 331 aa27.09■■□□□ 1.93
PHF1-209ENST00000487667 FYB1O15117 783 aa27.08■■□□□ 1.93
PHF1-209ENST00000487667 KIF20BQ96Q89 1820 aa27.07■■□□□ 1.92
PHF1-209ENST00000487667 NPHP4O75161 1426 aaPredicted RBP27.06■■□□□ 1.92
PHF1-209ENST00000487667 SUPT16HQ9Y5B9 1047 aaKnown RBP27.03■■□□□ 1.92
PHF1-209ENST00000487667 ITSN1Q15811 1721 aa27.03■■□□□ 1.92
PHF1-209ENST00000487667 MTHFSP49914 203 aa27.02■■□□□ 1.92
PHF1-209ENST00000487667 LMTK3Q96Q04 1460 aa27.02■■□□□ 1.92
PHF1-209ENST00000487667 MON2Q7Z3U7 1717 aa27.02■■□□□ 1.92
PHF1-209ENST00000487667 TOPAZ1Q8N9V7 1692 aa27.02■■□□□ 1.92
PHF1-209ENST00000487667 PLEKHG3A1L390 1219 aa27.02■■□□□ 1.92
PHF1-209ENST00000487667 AKAP12Q02952 1782 aa27.01■■□□□ 1.92
PHF1-209ENST00000487667 GGNBP2Q9H3C7 697 aa27.01■■□□□ 1.91
PHF1-209ENST00000487667 CHD2O14647 1828 aaKnown RBP27■■□□□ 1.91
PHF1-209ENST00000487667 TNNT2P45379 298 aaPredicted RBP27■■□□□ 1.91
PHF1-209ENST00000487667 PRR36Q9H6K5 1346 aa26.99■■□□□ 1.91
PHF1-209ENST00000487667 ERICH6BQ5W0A0 696 aa26.98■■□□□ 1.91
PHF1-209ENST00000487667 ANKARQ7Z5J8 1434 aa26.98■■□□□ 1.91
PHF1-209ENST00000487667 KCNA6P17658 529 aa26.97■■□□□ 1.91
PHF1-209ENST00000487667 FKBP8Q14318 412 aa26.97■■□□□ 1.91
PHF1-209ENST00000487667 SHPRHQ149N8 1683 aa26.95■■□□□ 1.91
PHF1-209ENST00000487667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.93■■□□□ 1.9
PHF1-209ENST00000487667 NCBP3Q53F19 620 aaKnown RBP26.91■■□□□ 1.9
PHF1-209ENST00000487667 AATKQ6ZMQ8 1374 aa26.91■■□□□ 1.9
PHF1-209ENST00000487667 COG3Q96JB2 828 aa26.9■■□□□ 1.9
PHF1-209ENST00000487667 ACEP12821 1306 aa26.9■■□□□ 1.9
PHF1-209ENST00000487667 PNPLA6Q8IY17 1366 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms