RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 SEPT12Q8IYM1 358 aa18.6■□□□□ 0.57
TRIM56-204ENST00000487252 PXDNQ92626 1479 aa18.59■□□□□ 0.57
TRIM56-204ENST00000487252 CHGAP10645 457 aaKnown RBP18.59■□□□□ 0.57
TRIM56-204ENST00000487252 IQGAP3Q86VI3 1631 aa18.58■□□□□ 0.56
TRIM56-204ENST00000487252 R3HDM1Q15032 1099 aaKnown RBP18.57■□□□□ 0.56
TRIM56-204ENST00000487252 KANK4Q5T7N3 995 aaPredicted RBP18.56■□□□□ 0.56
TRIM56-204ENST00000487252 KRT27Q7Z3Y8 459 aa18.56■□□□□ 0.56
TRIM56-204ENST00000487252 E9PCH4 1651 aa18.56■□□□□ 0.56
TRIM56-204ENST00000487252 DISP2A7MBM2 1401 aa18.55■□□□□ 0.56
TRIM56-204ENST00000487252 ADGRL2O95490 1459 aa18.54■□□□□ 0.56
TRIM56-204ENST00000487252 NPHP3Q7Z494 1330 aa18.53■□□□□ 0.56
TRIM56-204ENST00000487252 RGPD1P0DJD0 1748 aa18.52■□□□□ 0.56
TRIM56-204ENST00000487252 EN1Q05925 392 aaPredicted RBP18.52■□□□□ 0.56
TRIM56-204ENST00000487252 VPS72Q15906 364 aa18.52■□□□□ 0.56
TRIM56-204ENST00000487252 CHIC2Q9UKJ5 165 aa18.51■□□□□ 0.55
TRIM56-204ENST00000487252 PRAG1Q86YV5 1406 aa18.5■□□□□ 0.55
TRIM56-204ENST00000487252 USP32Q8NFA0 1604 aa18.5■□□□□ 0.55
TRIM56-204ENST00000487252 ANKRD50Q9ULJ7 1429 aa18.49■□□□□ 0.55
TRIM56-204ENST00000487252 NWD2Q9ULI1 1742 aa18.49■□□□□ 0.55
TRIM56-204ENST00000487252 TNS1Q9HBL0 1735 aaKnown RBP18.48■□□□□ 0.55
TRIM56-204ENST00000487252 ROBO2Q9HCK4 1378 aa18.47■□□□□ 0.55
TRIM56-204ENST00000487252 PLCH1Q4KWH8 1693 aa18.45■□□□□ 0.54
TRIM56-204ENST00000487252 VPS8Q8N3P4 1428 aa18.43■□□□□ 0.54
TRIM56-204ENST00000487252 SENP3-EIF4A1A0A087X0R7 540 aa18.43■□□□□ 0.54
TRIM56-204ENST00000487252 FOXO3O43524 673 aa18.43■□□□□ 0.54
TRIM56-204ENST00000487252 ZNF784Q8NCA9 323 aaPredicted RBP18.43■□□□□ 0.54
TRIM56-204ENST00000487252 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
TRIM56-204ENST00000487252 XPCQ01831 940 aaPredicted RBP18.42■□□□□ 0.54
TRIM56-204ENST00000487252 ESCO1Q5FWF5 840 aa18.42■□□□□ 0.54
TRIM56-204ENST00000487252 UTRNP46939 3433 aa18.42■□□□□ 0.54
TRIM56-204ENST00000487252 NINLQ9Y2I6 1382 aa18.42■□□□□ 0.54
TRIM56-204ENST00000487252 NEXMIFQ5QGS0 1516 aa18.41■□□□□ 0.54
TRIM56-204ENST00000487252 CAMKK2Q96RR4 588 aa18.41■□□□□ 0.54
TRIM56-204ENST00000487252 SPATA31A3Q5VYP0 1347 aa18.41■□□□□ 0.54
TRIM56-204ENST00000487252 LRPPRCP42704 1394 aaKnown RBP18.41■□□□□ 0.54
TRIM56-204ENST00000487252 EZH2Q15910 746 aaKnown RBP18.4■□□□□ 0.54
TRIM56-204ENST00000487252 HFM1A2PYH4 1435 aa18.4■□□□□ 0.54
TRIM56-204ENST00000487252 C1QTNF8P60827 252 aa18.38■□□□□ 0.53
TRIM56-204ENST00000487252 CAMTA1Q9Y6Y1 1673 aa18.38■□□□□ 0.53
TRIM56-204ENST00000487252 CEP350Q5VT06 3117 aa18.37■□□□□ 0.53
TRIM56-204ENST00000487252 DCAF8L1A6NGE4 600 aa18.37■□□□□ 0.53
TRIM56-204ENST00000487252 PARD3Q8TEW0 1356 aa18.37■□□□□ 0.53
TRIM56-204ENST00000487252 RREB1Q92766 1687 aa18.37■□□□□ 0.53
TRIM56-204ENST00000487252 ADGRB2O60241 1585 aa18.36■□□□□ 0.53
TRIM56-204ENST00000487252 NRAPQ86VF7 1730 aa18.36■□□□□ 0.53
TRIM56-204ENST00000487252 CCDC9Q9Y3X0 531 aaKnown RBP18.35■□□□□ 0.53
TRIM56-204ENST00000487252 ABCA3Q99758 1704 aa18.35■□□□□ 0.53
TRIM56-204ENST00000487252 FAM98CQ17RN3 349 aaKnown RBP18.34■□□□□ 0.53
TRIM56-204ENST00000487252 NUP188Q5SRE5 1749 aa18.33■□□□□ 0.52
TRIM56-204ENST00000487252 FAM182BQ5T319 152 aa18.33■□□□□ 0.52
TRIM56-204ENST00000487252 THSD7AQ9UPZ6 1657 aa18.33■□□□□ 0.52
TRIM56-204ENST00000487252 ZNF326Q5BKZ1 582 aaKnown RBP18.32■□□□□ 0.52
TRIM56-204ENST00000487252 SPON1Q9HCB6 807 aa18.32■□□□□ 0.52
TRIM56-204ENST00000487252 CCDC144AA2RUR9 1427 aa18.32■□□□□ 0.52
TRIM56-204ENST00000487252 KCNQ2O43526 872 aa18.3■□□□□ 0.52
TRIM56-204ENST00000487252 KIF1AQ12756 1690 aa18.3■□□□□ 0.52
TRIM56-204ENST00000487252 A0A0G2JS52 829 aa18.29■□□□□ 0.52
TRIM56-204ENST00000487252 FAM83GA6ND36 823 aa18.29■□□□□ 0.52
TRIM56-204ENST00000487252 MYT1Q01538 1121 aa18.29■□□□□ 0.52
TRIM56-204ENST00000487252 PPP1R1BQ9UD71 204 aaPredicted RBP18.29■□□□□ 0.52
TRIM56-204ENST00000487252 CABLES1Q8TDN4 633 aa18.28■□□□□ 0.52
TRIM56-204ENST00000487252 TNS3Q68CZ2 1445 aa18.28■□□□□ 0.52
TRIM56-204ENST00000487252 NAIPQ13075 1403 aa18.27■□□□□ 0.52
TRIM56-204ENST00000487252 CHD4Q14839 1912 aa18.25■□□□□ 0.51
TRIM56-204ENST00000487252 KRT28Q7Z3Y7 464 aa18.25■□□□□ 0.51
TRIM56-204ENST00000487252 SPATA31A5Q5VU36 1347 aa18.24■□□□□ 0.51
TRIM56-204ENST00000487252 SPATA31A7Q8IWB4 1347 aa18.24■□□□□ 0.51
TRIM56-204ENST00000487252 CLTCL1P53675 1640 aa18.24■□□□□ 0.51
TRIM56-204ENST00000487252 TRIM37O94972 964 aa18.24■□□□□ 0.51
TRIM56-204ENST00000487252 FMN2Q9NZ56 1722 aa18.23■□□□□ 0.51
TRIM56-204ENST00000487252 NUP155O75694 1391 aa18.23■□□□□ 0.51
TRIM56-204ENST00000487252 HAP1P54257 671 aaPredicted RBP18.23■□□□□ 0.51
TRIM56-204ENST00000487252 NBPF8Q3BBV2 869 aa18.23■□□□□ 0.51
TRIM56-204ENST00000487252 NBPF14Q5TI25 921 aa18.23■□□□□ 0.51
TRIM56-204ENST00000487252 FAM196AQ6ZSG2 479 aa18.23■□□□□ 0.51
TRIM56-204ENST00000487252 SBNO1A3KN83 1393 aa18.22■□□□□ 0.51
TRIM56-204ENST00000487252 APBA3O96018 575 aa18.22■□□□□ 0.51
TRIM56-204ENST00000487252 BTG4Q9NY30 223 aa18.21■□□□□ 0.51
TRIM56-204ENST00000487252 COL14A1Q05707 1796 aaKnown RBP18.21■□□□□ 0.51
TRIM56-204ENST00000487252 NUTM2FA1L443 756 aa18.2■□□□□ 0.5
TRIM56-204ENST00000487252 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
TRIM56-204ENST00000487252 TECPR2O15040 1411 aa18.2■□□□□ 0.5
TRIM56-204ENST00000487252 ARHGEF10O15013 1369 aa18.19■□□□□ 0.5
TRIM56-204ENST00000487252 CASZ1Q86V15 1759 aa18.19■□□□□ 0.5
TRIM56-204ENST00000487252 KIF1BO60333 1816 aa18.19■□□□□ 0.5
TRIM56-204ENST00000487252 NRKQ7Z2Y5 1582 aa18.18■□□□□ 0.5
TRIM56-204ENST00000487252 RRBP1Q9P2E9 1410 aaKnown RBP18.18■□□□□ 0.5
TRIM56-204ENST00000487252 PSME1Q06323 249 aa18.17■□□□□ 0.5
TRIM56-204ENST00000487252 ROCK1Q13464 1354 aa18.17■□□□□ 0.5
TRIM56-204ENST00000487252 NRXN1Q9ULB1 1477 aa18.15■□□□□ 0.5
TRIM56-204ENST00000487252 RGPD8O14715 1765 aaPredicted RBP18.15■□□□□ 0.5
TRIM56-204ENST00000487252 MYOM1P52179 1685 aa18.15■□□□□ 0.5
TRIM56-204ENST00000487252 WAPLQ7Z5K2 1190 aa18.13■□□□□ 0.49
TRIM56-204ENST00000487252 PHF8Q9UPP1 1060 aa18.12■□□□□ 0.49
TRIM56-204ENST00000487252 SPATA31A1Q5TZJ5 1347 aa18.12■□□□□ 0.49
TRIM56-204ENST00000487252 PPLO60437 1756 aa18.12■□□□□ 0.49
TRIM56-204ENST00000487252 PTGER2P43116 358 aa18.11■□□□□ 0.49
TRIM56-204ENST00000487252 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
TRIM56-204ENST00000487252 RPGRIP1LQ68CZ1 1315 aa18.11■□□□□ 0.49
TRIM56-204ENST00000487252 PLEKHH1Q9ULM0 1364 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms