RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 CERKQ8TCT0 537 aa16.15■□□□□ 0.18
NUP50-216ENST00000486184 GPRASP1Q5JY77 1395 aa16.14■□□□□ 0.17
NUP50-216ENST00000486184 NCOA3Q9Y6Q9 1424 aa16.14■□□□□ 0.17
NUP50-216ENST00000486184 RBM33Q96EV2 1170 aaKnown RBP16.14■□□□□ 0.17
NUP50-216ENST00000486184 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.14■□□□□ 0.17
NUP50-216ENST00000486184 MSH6P52701 1360 aa16.13■□□□□ 0.17
NUP50-216ENST00000486184 NPM3O75607 178 aaKnown RBP16.13■□□□□ 0.17
NUP50-216ENST00000486184 SIRT1Q96EB6 747 aa16.12■□□□□ 0.17
NUP50-216ENST00000486184 PRAM1Q96QH2 718 aa16.12■□□□□ 0.17
NUP50-216ENST00000486184 ADGRL3Q9HAR2 1447 aa16.11■□□□□ 0.17
NUP50-216ENST00000486184 SAFB2Q14151 953 aaKnown RBP eCLIP16.11■□□□□ 0.17
NUP50-216ENST00000486184 WAPLQ7Z5K2 1190 aa16.11■□□□□ 0.17
NUP50-216ENST00000486184 ZEB1P37275 1124 aaPredicted RBP16.1■□□□□ 0.17
NUP50-216ENST00000486184 PLEKHH1Q9ULM0 1364 aa16.1■□□□□ 0.17
NUP50-216ENST00000486184 CENPJQ9HC77 1338 aaPredicted RBP16.09■□□□□ 0.17
NUP50-216ENST00000486184 CDC42BPGQ6DT37 1551 aa16.09■□□□□ 0.17
NUP50-216ENST00000486184 ATF3P18847 181 aa16.08■□□□□ 0.16
NUP50-216ENST00000486184 C19orf44Q9H6X5 657 aa16.08■□□□□ 0.16
NUP50-216ENST00000486184 RNF216Q9NWF9 866 aaPredicted RBP16.08■□□□□ 0.16
NUP50-216ENST00000486184 ADGRB2O60241 1585 aa16.08■□□□□ 0.16
NUP50-216ENST00000486184 DCCP43146 1447 aa16.07■□□□□ 0.16
NUP50-216ENST00000486184 FMN2Q9NZ56 1722 aa16.06■□□□□ 0.16
NUP50-216ENST00000486184 USP47Q96K76 1375 aa16.06■□□□□ 0.16
NUP50-216ENST00000486184 MINK1Q8N4C8 1332 aaPredicted RBP16.06■□□□□ 0.16
NUP50-216ENST00000486184 TOM1O60784 492 aa16.05■□□□□ 0.16
NUP50-216ENST00000486184 CADPS2Q86UW7 1296 aa16.05■□□□□ 0.16
NUP50-216ENST00000486184 UBAP1LF5GYI3 381 aa16.04■□□□□ 0.16
NUP50-216ENST00000486184 HIRIP3Q9BW71 556 aaPredicted RBP16.03■□□□□ 0.16
NUP50-216ENST00000486184 RGPD8O14715 1765 aaPredicted RBP16.03■□□□□ 0.16
NUP50-216ENST00000486184 ITSN1Q15811 1721 aa16.02■□□□□ 0.16
NUP50-216ENST00000486184 EIF4G2P78344 907 aaKnown RBP eCLIP16.01■□□□□ 0.15
NUP50-216ENST00000486184 ROBO1Q9Y6N7 1651 aa15.99■□□□□ 0.15
NUP50-216ENST00000486184 ST20-MTHFSA0A0A6YYL1 179 aa15.99■□□□□ 0.15
NUP50-216ENST00000486184 SLC24A1O60721 1099 aa15.99■□□□□ 0.15
NUP50-216ENST00000486184 HOXD11P31277 338 aaPredicted RBP15.99■□□□□ 0.15
NUP50-216ENST00000486184 SBNO2Q9Y2G9 1366 aa15.99■□□□□ 0.15
NUP50-216ENST00000486184 TULP4Q9NRJ4 1543 aa15.99■□□□□ 0.15
NUP50-216ENST00000486184 EVC2Q86UK5 1308 aa15.98■□□□□ 0.15
NUP50-216ENST00000486184 WASLO00401 505 aaPredicted RBP15.98■□□□□ 0.15
NUP50-216ENST00000486184 PIP4K2BP78356 416 aa15.98■□□□□ 0.15
NUP50-216ENST00000486184 MST1RQ04912 1400 aa15.98■□□□□ 0.15
NUP50-216ENST00000486184 SLAIN2Q9P270 581 aa15.98■□□□□ 0.15
NUP50-216ENST00000486184 NUTM2FA1L443 756 aa15.97■□□□□ 0.15
NUP50-216ENST00000486184 SRPK2P78362 688 aaKnown RBP15.97■□□□□ 0.15
NUP50-216ENST00000486184 KIF1AQ12756 1690 aa15.97■□□□□ 0.15
NUP50-216ENST00000486184 USP32Q8NFA0 1604 aa15.97■□□□□ 0.15
NUP50-216ENST00000486184 ANKARQ7Z5J8 1434 aa15.96■□□□□ 0.15
NUP50-216ENST00000486184 C1orf167Q5SNV9 1468 aa15.96■□□□□ 0.14
NUP50-216ENST00000486184 HSPA5P11021 654 aaKnown RBP15.95■□□□□ 0.14
NUP50-216ENST00000486184 POTEDQ86YR6 584 aa15.95■□□□□ 0.14
NUP50-216ENST00000486184 CDK19Q9BWU1 502 aa15.95■□□□□ 0.14
NUP50-216ENST00000486184 TOPAZ1Q8N9V7 1692 aa15.95■□□□□ 0.14
NUP50-216ENST00000486184 TMF1P82094 1093 aa15.93■□□□□ 0.14
NUP50-216ENST00000486184 ESCO1Q5FWF5 840 aa15.93■□□□□ 0.14
NUP50-216ENST00000486184 FBXO41Q8TF61 875 aa15.93■□□□□ 0.14
NUP50-216ENST00000486184 ATP7BP35670 1465 aa15.92■□□□□ 0.14
NUP50-216ENST00000486184 PHLPP1O60346 1717 aa15.92■□□□□ 0.14
NUP50-216ENST00000486184 NHSL1Q5SYE7 1610 aa15.91■□□□□ 0.14
NUP50-216ENST00000486184 CDCA8Q53HL2 280 aa15.91■□□□□ 0.14
NUP50-216ENST00000486184 TESK2Q96S53 571 aa15.91■□□□□ 0.14
NUP50-216ENST00000486184 CABP2Q9NPB3 220 aa15.91■□□□□ 0.14
NUP50-216ENST00000486184 ATAD2Q6PL18 1390 aa15.9■□□□□ 0.14
NUP50-216ENST00000486184 NUDT16Q96DE0 195 aaKnown RBP15.9■□□□□ 0.14
NUP50-216ENST00000486184 BRINP3Q76B58 766 aa15.89■□□□□ 0.13
NUP50-216ENST00000486184 PPIP5K1Q6PFW1 1433 aa15.88■□□□□ 0.13
NUP50-216ENST00000486184 ORAI2Q96SN7 254 aa15.88■□□□□ 0.13
NUP50-216ENST00000486184 PHF8Q9UPP1 1060 aa15.88■□□□□ 0.13
NUP50-216ENST00000486184 PRR36Q9H6K5 1346 aa15.88■□□□□ 0.13
NUP50-216ENST00000486184 DISP3Q9P2K9 1392 aa15.87■□□□□ 0.13
NUP50-216ENST00000486184 AHDC1Q5TGY3 1603 aaPredicted RBP15.87■□□□□ 0.13
NUP50-216ENST00000486184 CCDC61Q9Y6R9 512 aa15.87■□□□□ 0.13
NUP50-216ENST00000486184 AKAP12Q02952 1782 aa15.86■□□□□ 0.13
NUP50-216ENST00000486184 POLR3GLQ9BT43 218 aa15.86■□□□□ 0.13
NUP50-216ENST00000486184 NGDNQ8NEJ9 315 aaKnown RBP15.85■□□□□ 0.13
NUP50-216ENST00000486184 PMFBP1Q8TBY8 1022 aa15.85■□□□□ 0.13
NUP50-216ENST00000486184 TMC1Q8TDI8 760 aa15.85■□□□□ 0.13
NUP50-216ENST00000486184 PUS7Q96PZ0 661 aaKnown RBP15.85■□□□□ 0.13
NUP50-216ENST00000486184 NPHP3Q7Z494 1330 aa15.85■□□□□ 0.13
NUP50-216ENST00000486184 MYOM1P52179 1685 aa15.84■□□□□ 0.13
NUP50-216ENST00000486184 NINLQ9Y2I6 1382 aa15.83■□□□□ 0.12
NUP50-216ENST00000486184 COL16A1Q07092 1604 aaPredicted RBP15.83■□□□□ 0.12
NUP50-216ENST00000486184 FOXO3O43524 673 aa15.82■□□□□ 0.12
NUP50-216ENST00000486184 PSME1Q06323 249 aa15.82■□□□□ 0.12
NUP50-216ENST00000486184 CABP1Q9NZU7 370 aa15.82■□□□□ 0.12
NUP50-216ENST00000486184 MON2Q7Z3U7 1717 aa15.81■□□□□ 0.12
NUP50-216ENST00000486184 ACEP12821 1306 aa15.8■□□□□ 0.12
NUP50-216ENST00000486184 PLEKHG3A1L390 1219 aa15.8■□□□□ 0.12
NUP50-216ENST00000486184 DDX17Q92841 729 aaKnown RBP15.8■□□□□ 0.12
NUP50-216ENST00000486184 PXDNQ92626 1479 aa15.79■□□□□ 0.12
NUP50-216ENST00000486184 POLR3AO14802 1390 aaPredicted RBP15.79■□□□□ 0.12
NUP50-216ENST00000486184 HSPA1LP34931 641 aa15.79■□□□□ 0.12
NUP50-216ENST00000486184 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
NUP50-216ENST00000486184 HDGFL2Q7Z4V5 671 aaPredicted RBP15.79■□□□□ 0.12
NUP50-216ENST00000486184 TERF2IPQ9NYB0 399 aa15.79■□□□□ 0.12
NUP50-216ENST00000486184 TRPM3Q9HCF6 1732 aaPredicted RBP15.79■□□□□ 0.12
NUP50-216ENST00000486184 KRT28Q7Z3Y7 464 aa15.78■□□□□ 0.12
NUP50-216ENST00000486184 SHPRHQ149N8 1683 aa15.77■□□□□ 0.12
NUP50-216ENST00000486184 SLC12A5Q9H2X9 1139 aa15.77■□□□□ 0.12
NUP50-216ENST00000486184 KTN1Q86UP2 1357 aaKnown RBP15.76■□□□□ 0.11
NUP50-216ENST00000486184 SOS2Q07890 1332 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms