RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 MEX3CQ5U5Q3 659 aaKnown RBP28.56■■■□□ 2.16
SNX5-213ENST00000486039 PLEKHH1Q9ULM0 1364 aa28.54■■■□□ 2.16
SNX5-213ENST00000486039 KNDC1Q76NI1 1749 aa28.54■■■□□ 2.16
SNX5-213ENST00000486039 NHSL1Q5SYE7 1610 aa28.54■■■□□ 2.16
SNX5-213ENST00000486039 C1orf167Q5SNV9 1468 aa28.53■■■□□ 2.16
SNX5-213ENST00000486039 LAMC1P11047 1609 aa28.53■■■□□ 2.16
SNX5-213ENST00000486039 LRRC59Q96AG4 307 aaKnown RBP28.51■■■□□ 2.15
SNX5-213ENST00000486039 STAC3Q96MF2 364 aa28.51■■■□□ 2.15
SNX5-213ENST00000486039 SIRT1Q96EB6 747 aa28.5■■■□□ 2.15
SNX5-213ENST00000486039 NUTM2BA6NNL0 878 aaPredicted RBP28.48■■■□□ 2.15
SNX5-213ENST00000486039 NUTM2EB1AL46 878 aaPredicted RBP28.48■■■□□ 2.15
SNX5-213ENST00000486039 ZNF772Q68DY9 489 aaPredicted RBP28.48■■■□□ 2.15
SNX5-213ENST00000486039 NUTM2AQ8IVF1 878 aaPredicted RBP28.48■■■□□ 2.15
SNX5-213ENST00000486039 DDX17Q92841 729 aaKnown RBP28.48■■■□□ 2.15
SNX5-213ENST00000486039 ORAI2Q96SN7 254 aa28.47■■■□□ 2.15
SNX5-213ENST00000486039 ADGRB1O14514 1584 aa28.46■■■□□ 2.15
SNX5-213ENST00000486039 CDC42BPGQ6DT37 1551 aa28.46■■■□□ 2.15
SNX5-213ENST00000486039 PRAM1Q96QH2 718 aa28.41■■■□□ 2.14
SNX5-213ENST00000486039 PNPLA6Q8IY17 1366 aa28.4■■■□□ 2.14
SNX5-213ENST00000486039 DLC1Q96QB1 1528 aa28.4■■■□□ 2.14
SNX5-213ENST00000486039 TRIM26Q12899 539 aaPredicted RBP28.4■■■□□ 2.14
SNX5-213ENST00000486039 NUTM2FA1L443 756 aa28.38■■■□□ 2.13
SNX5-213ENST00000486039 TRAK1Q9UPV9 953 aa28.38■■■□□ 2.13
SNX5-213ENST00000486039 SAFB2Q14151 953 aaKnown RBP eCLIP28.37■■■□□ 2.13
SNX5-213ENST00000486039 ESCO1Q5FWF5 840 aa28.37■■■□□ 2.13
SNX5-213ENST00000486039 SIN3AQ96ST3 1273 aa28.37■■■□□ 2.13
SNX5-213ENST00000486039 SOS2Q07890 1332 aaPredicted RBP28.37■■■□□ 2.13
SNX5-213ENST00000486039 POGKQ9P215 609 aa28.35■■■□□ 2.13
SNX5-213ENST00000486039 AFF2P51816 1311 aa28.35■■■□□ 2.13
SNX5-213ENST00000486039 FMN2Q9NZ56 1722 aa28.32■■■□□ 2.12
SNX5-213ENST00000486039 RXRBP28702 533 aa28.32■■■□□ 2.12
SNX5-213ENST00000486039 L3MBTL2Q969R5 705 aa28.3■■■□□ 2.12
SNX5-213ENST00000486039 C8orf37Q96NL8 207 aa28.3■■■□□ 2.12
SNX5-213ENST00000486039 NEUROD1Q13562 356 aa28.28■■■□□ 2.12
SNX5-213ENST00000486039 NPHP3Q7Z494 1330 aa28.27■■■□□ 2.12
SNX5-213ENST00000486039 FOXO3O43524 673 aa28.27■■■□□ 2.12
SNX5-213ENST00000486039 NBPF1Q3BBV0 1214 aa28.26■■■□□ 2.11
SNX5-213ENST00000486039 ADAMTS2O95450 1211 aa28.25■■■□□ 2.11
SNX5-213ENST00000486039 HIRIP3Q9BW71 556 aaPredicted RBP28.25■■■□□ 2.11
SNX5-213ENST00000486039 MINK1Q8N4C8 1332 aaPredicted RBP28.24■■■□□ 2.11
SNX5-213ENST00000486039 KIAA1210Q9ULL0 1709 aa28.24■■■□□ 2.11
SNX5-213ENST00000486039 PXDNQ92626 1479 aa28.24■■■□□ 2.11
SNX5-213ENST00000486039 CDK12Q9NYV4 1490 aaPredicted RBP28.24■■■□□ 2.11
SNX5-213ENST00000486039 ADGRB2O60241 1585 aa28.24■■■□□ 2.11
SNX5-213ENST00000486039 XPCQ01831 940 aaPredicted RBP28.23■■■□□ 2.11
SNX5-213ENST00000486039 NGLY1Q96IV0 654 aa28.23■■■□□ 2.11
SNX5-213ENST00000486039 QTRT2Q9H974 415 aaKnown RBP28.23■■■□□ 2.11
SNX5-213ENST00000486039 ARHGEF28Q8N1W1 1705 aaKnown RBP28.21■■■□□ 2.11
SNX5-213ENST00000486039 COL22A1Q8NFW1 1626 aaPredicted RBP28.19■■■□□ 2.1
SNX5-213ENST00000486039 RBM6P78332 1123 aaKnown RBP28.19■■■□□ 2.1
SNX5-213ENST00000486039 PHF8Q9UPP1 1060 aa28.19■■■□□ 2.1
SNX5-213ENST00000486039 RGPD8O14715 1765 aaPredicted RBP28.19■■■□□ 2.1
SNX5-213ENST00000486039 UPF1Q92900 1129 aaKnown RBP eCLIP28.18■■■□□ 2.1
SNX5-213ENST00000486039 KIF1AQ12756 1690 aa28.18■■■□□ 2.1
SNX5-213ENST00000486039 USP32Q8NFA0 1604 aa28.18■■■□□ 2.1
SNX5-213ENST00000486039 ANKARQ7Z5J8 1434 aa28.18■■■□□ 2.1
SNX5-213ENST00000486039 WASLO00401 505 aaPredicted RBP28.17■■■□□ 2.1
SNX5-213ENST00000486039 PRR36Q9H6K5 1346 aa28.15■■■□□ 2.1
SNX5-213ENST00000486039 KRT28Q7Z3Y7 464 aa28.13■■■□□ 2.09
SNX5-213ENST00000486039 USP21Q9UK80 565 aa28.13■■■□□ 2.09
SNX5-213ENST00000486039 FNBP4Q8N3X1 1017 aaPredicted RBP28.12■■■□□ 2.09
SNX5-213ENST00000486039 PMFBP1Q8TBY8 1022 aa28.12■■■□□ 2.09
SNX5-213ENST00000486039 TULP4Q9NRJ4 1543 aa28.12■■■□□ 2.09
SNX5-213ENST00000486039 RGS12O14924 1447 aa28.11■■■□□ 2.09
SNX5-213ENST00000486039 EIF3AQ14152 1382 aaKnown RBP28.11■■■□□ 2.09
SNX5-213ENST00000486039 SPATA31A3Q5VYP0 1347 aa28.1■■■□□ 2.09
SNX5-213ENST00000486039 TRPC5Q9UL62 973 aaPredicted RBP28.09■■■□□ 2.09
SNX5-213ENST00000486039 TRPM1Q7Z4N2 1603 aa28.07■■■□□ 2.08
SNX5-213ENST00000486039 NBPF8Q3BBV2 869 aa28.07■■■□□ 2.08
SNX5-213ENST00000486039 PSME1Q06323 249 aa28.06■■■□□ 2.08
SNX5-213ENST00000486039 CDK19Q9BWU1 502 aa28.06■■■□□ 2.08
SNX5-213ENST00000486039 CENPJQ9HC77 1338 aaPredicted RBP28.04■■■□□ 2.08
SNX5-213ENST00000486039 NUDT16Q96DE0 195 aaKnown RBP28.04■■■□□ 2.08
SNX5-213ENST00000486039 ATP7BP35670 1465 aa28.03■■■□□ 2.08
SNX5-213ENST00000486039 ATRNO75882 1429 aa28.03■■■□□ 2.08
SNX5-213ENST00000486039 TNS3Q68CZ2 1445 aa28.03■■■□□ 2.08
SNX5-213ENST00000486039 SBNO1A3KN83 1393 aa28.03■■■□□ 2.08
SNX5-213ENST00000486039 ROCK2O75116 1388 aaKnown RBP28.02■■■□□ 2.08
SNX5-213ENST00000486039 MARF1Q9Y4F3 1742 aaKnown RBP28.02■■■□□ 2.08
SNX5-213ENST00000486039 TONSLQ96HA7 1378 aa28.01■■■□□ 2.07
SNX5-213ENST00000486039 BCL9LQ86UU0 1499 aa28■■■□□ 2.07
SNX5-213ENST00000486039 NGDNQ8NEJ9 315 aaKnown RBP27.97■■■□□ 2.07
SNX5-213ENST00000486039 GPRASP1Q5JY77 1395 aa27.97■■■□□ 2.07
SNX5-213ENST00000486039 LMOD2Q6P5Q4 547 aa27.95■■■□□ 2.06
SNX5-213ENST00000486039 CCDC61Q9Y6R9 512 aa27.95■■■□□ 2.06
SNX5-213ENST00000486039 TRPM3Q9HCF6 1732 aaPredicted RBP27.95■■■□□ 2.06
SNX5-213ENST00000486039 QRICH2Q9H0J4 1663 aa27.94■■■□□ 2.06
SNX5-213ENST00000486039 CABLES1Q8TDN4 633 aa27.94■■■□□ 2.06
SNX5-213ENST00000486039 ARHGEF10O15013 1369 aa27.94■■■□□ 2.06
SNX5-213ENST00000486039 ITSN1Q15811 1721 aa27.93■■■□□ 2.06
SNX5-213ENST00000486039 ATAD2Q6PL18 1390 aa27.92■■■□□ 2.06
SNX5-213ENST00000486039 SRPK2P78362 688 aaKnown RBP27.92■■■□□ 2.06
SNX5-213ENST00000486039 CABP2Q9NPB3 220 aa27.92■■■□□ 2.06
SNX5-213ENST00000486039 TOPAZ1Q8N9V7 1692 aa27.91■■■□□ 2.06
SNX5-213ENST00000486039 PLEKHG3A1L390 1219 aa27.91■■■□□ 2.06
SNX5-213ENST00000486039 PLEKHG5O94827 1062 aa27.91■■■□□ 2.06
SNX5-213ENST00000486039 UNC5CLQ8IV45 518 aa27.91■■■□□ 2.06
SNX5-213ENST00000486039 GJD4Q96KN9 370 aaPredicted RBP27.91■■■□□ 2.06
SNX5-213ENST00000486039 PCGF6Q9BYE7 350 aa27.91■■■□□ 2.06
SNX5-213ENST00000486039 SLIT2O94813 1529 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms