RNA–Protein interactions for RNA: ENST00000484589.1

CDK13-205, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,111 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-205ENST00000484589 PLEKHH1Q9ULM0 1364 aa12.05□□□□□ -0.48
CDK13-205ENST00000484589 ABCC11Q96J66 1382 aa12.04□□□□□ -0.48
CDK13-205ENST00000484589 ST20-MTHFSA0A0A6YYL1 179 aa12.04□□□□□ -0.48
CDK13-205ENST00000484589 PRAM1Q96QH2 718 aa12.04□□□□□ -0.48
CDK13-205ENST00000484589 USP47Q96K76 1375 aa12.03□□□□□ -0.48
CDK13-205ENST00000484589 PIK3R4Q99570 1358 aa12.03□□□□□ -0.48
CDK13-205ENST00000484589 HSPA5P11021 654 aaKnown RBP12.02□□□□□ -0.48
CDK13-205ENST00000484589 XRN1Q8IZH2 1706 aaKnown RBP12.02□□□□□ -0.48
CDK13-205ENST00000484589 ARHGEF28Q8N1W1 1705 aaKnown RBP12.01□□□□□ -0.49
CDK13-205ENST00000484589 TECPR2O15040 1411 aa12.01□□□□□ -0.49
CDK13-205ENST00000484589 EIF4G2P78344 907 aaKnown RBP eCLIP12□□□□□ -0.49
CDK13-205ENST00000484589 PROSER2Q86WR7 435 aaPredicted RBP11.99□□□□□ -0.49
CDK13-205ENST00000484589 TESK2Q96S53 571 aa11.99□□□□□ -0.49
CDK13-205ENST00000484589 POGKQ9P215 609 aa11.99□□□□□ -0.49
CDK13-205ENST00000484589 NWD1Q149M9 1564 aa11.99□□□□□ -0.49
CDK13-205ENST00000484589 MINK1Q8N4C8 1332 aaPredicted RBP11.99□□□□□ -0.49
CDK13-205ENST00000484589 CENPJQ9HC77 1338 aaPredicted RBP11.99□□□□□ -0.49
CDK13-205ENST00000484589 CPS1P31327 1500 aa11.98□□□□□ -0.49
CDK13-205ENST00000484589 KNDC1Q76NI1 1749 aa11.98□□□□□ -0.49
CDK13-205ENST00000484589 PTCH1Q13635 1447 aa11.98□□□□□ -0.49
CDK13-205ENST00000484589 C11orf95C9JLR9 678 aaPredicted RBP11.98□□□□□ -0.49
CDK13-205ENST00000484589 VSIG10Q8N0Z9 540 aa11.98□□□□□ -0.49
CDK13-205ENST00000484589 DLC1Q96QB1 1528 aa11.97□□□□□ -0.49
CDK13-205ENST00000484589 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.97□□□□□ -0.49
CDK13-205ENST00000484589 TMEM94Q12767 1356 aa11.97□□□□□ -0.49
CDK13-205ENST00000484589 LTBP4Q8N2S1 1624 aa11.97□□□□□ -0.49
CDK13-205ENST00000484589 FAM135BQ49AJ0 1406 aa11.97□□□□□ -0.49
CDK13-205ENST00000484589 LRRC7Q96NW7 1537 aa11.96□□□□□ -0.49
CDK13-205ENST00000484589 SIRT1Q96EB6 747 aa11.96□□□□□ -0.49
CDK13-205ENST00000484589 XIRP1Q702N8 1843 aaKnown RBP11.96□□□□□ -0.49
CDK13-205ENST00000484589 QRICH2Q9H0J4 1663 aa11.96□□□□□ -0.5
CDK13-205ENST00000484589 EIF3AQ14152 1382 aaKnown RBP11.95□□□□□ -0.5
CDK13-205ENST00000484589 NKTRP30414 1462 aaKnown RBP11.95□□□□□ -0.5
CDK13-205ENST00000484589 NUTM2FA1L443 756 aa11.94□□□□□ -0.5
CDK13-205ENST00000484589 DISP3Q9P2K9 1392 aa11.94□□□□□ -0.5
CDK13-205ENST00000484589 NALCNQ8IZF0 1738 aa11.93□□□□□ -0.5
CDK13-205ENST00000484589 CABP2Q9NPB3 220 aa11.92□□□□□ -0.5
CDK13-205ENST00000484589 CDK19Q9BWU1 502 aa11.92□□□□□ -0.5
CDK13-205ENST00000484589 TULP4Q9NRJ4 1543 aa11.91□□□□□ -0.5
CDK13-205ENST00000484589 C19orf44Q9H6X5 657 aa11.91□□□□□ -0.5
CDK13-205ENST00000484589 ADGRL3Q9HAR2 1447 aa11.91□□□□□ -0.5
CDK13-205ENST00000484589 WASLO00401 505 aaPredicted RBP11.9□□□□□ -0.5
CDK13-205ENST00000484589 ZBTB22O15209 634 aa11.9□□□□□ -0.5
CDK13-205ENST00000484589 SBNO2Q9Y2G9 1366 aa11.9□□□□□ -0.5
CDK13-205ENST00000484589 SRPK2P78362 688 aaKnown RBP11.89□□□□□ -0.51
CDK13-205ENST00000484589 POLR3GLQ9BT43 218 aa11.89□□□□□ -0.51
CDK13-205ENST00000484589 WASHC2AQ641Q2 1341 aa11.89□□□□□ -0.51
CDK13-205ENST00000484589 PRR36Q9H6K5 1346 aa11.89□□□□□ -0.51
CDK13-205ENST00000484589 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
CDK13-205ENST00000484589 KIF7Q2M1P5 1343 aa11.88□□□□□ -0.51
CDK13-205ENST00000484589 EVC2Q86UK5 1308 aa11.88□□□□□ -0.51
CDK13-205ENST00000484589 TMF1P82094 1093 aa11.88□□□□□ -0.51
CDK13-205ENST00000484589 RGPD8O14715 1765 aaPredicted RBP11.88□□□□□ -0.51
CDK13-205ENST00000484589 ADGRB2O60241 1585 aa11.87□□□□□ -0.51
CDK13-205ENST00000484589 MSH6P52701 1360 aa11.87□□□□□ -0.51
CDK13-205ENST00000484589 NCOA3Q9Y6Q9 1424 aa11.86□□□□□ -0.51
CDK13-205ENST00000484589 ATF3P18847 181 aa11.86□□□□□ -0.51
CDK13-205ENST00000484589 NUDT16Q96DE0 195 aaKnown RBP11.86□□□□□ -0.51
CDK13-205ENST00000484589 ZNF316A6NFI3 1004 aaPredicted RBP11.86□□□□□ -0.51
CDK13-205ENST00000484589 CERKQ8TCT0 537 aa11.86□□□□□ -0.51
CDK13-205ENST00000484589 ORAI2Q96SN7 254 aa11.86□□□□□ -0.51
CDK13-205ENST00000484589 USP32Q8NFA0 1604 aa11.85□□□□□ -0.51
CDK13-205ENST00000484589 CDC42BPGQ6DT37 1551 aa11.85□□□□□ -0.51
CDK13-205ENST00000484589 SLC12A5Q9H2X9 1139 aa11.85□□□□□ -0.51
CDK13-205ENST00000484589 CCDC7Q96M83 1385 aa11.85□□□□□ -0.51
CDK13-205ENST00000484589 FMN2Q9NZ56 1722 aa11.84□□□□□ -0.51
CDK13-205ENST00000484589 ATP7BP35670 1465 aa11.84□□□□□ -0.51
CDK13-205ENST00000484589 CADPS2Q86UW7 1296 aa11.84□□□□□ -0.51
CDK13-205ENST00000484589 CABP1Q9NZU7 370 aa11.84□□□□□ -0.51
CDK13-205ENST00000484589 SLAIN2Q9P270 581 aa11.84□□□□□ -0.51
CDK13-205ENST00000484589 MST1RQ04912 1400 aa11.83□□□□□ -0.52
CDK13-205ENST00000484589 PMFBP1Q8TBY8 1022 aa11.83□□□□□ -0.52
CDK13-205ENST00000484589 TMC1Q8TDI8 760 aa11.83□□□□□ -0.52
CDK13-205ENST00000484589 ESCO1Q5FWF5 840 aa11.83□□□□□ -0.52
CDK13-205ENST00000484589 DDX17Q92841 729 aaKnown RBP11.83□□□□□ -0.52
CDK13-205ENST00000484589 DCCP43146 1447 aa11.82□□□□□ -0.52
CDK13-205ENST00000484589 CCDC61Q9Y6R9 512 aa11.82□□□□□ -0.52
CDK13-205ENST00000484589 C1orf167Q5SNV9 1468 aa11.82□□□□□ -0.52
CDK13-205ENST00000484589 PPIP5K1Q6PFW1 1433 aa11.81□□□□□ -0.52
CDK13-205ENST00000484589 DDX10Q13206 875 aaKnown RBP11.8□□□□□ -0.52
CDK13-205ENST00000484589 CDCA8Q53HL2 280 aa11.8□□□□□ -0.52
CDK13-205ENST00000484589 MYOM1P52179 1685 aa11.8□□□□□ -0.52
CDK13-205ENST00000484589 UBAP1LF5GYI3 381 aa11.8□□□□□ -0.52
CDK13-205ENST00000484589 PIP4K2BP78356 416 aa11.8□□□□□ -0.52
CDK13-205ENST00000484589 BRINP3Q76B58 766 aa11.8□□□□□ -0.52
CDK13-205ENST00000484589 FOXO3O43524 673 aa11.79□□□□□ -0.52
CDK13-205ENST00000484589 XPCQ01831 940 aaPredicted RBP11.79□□□□□ -0.52
CDK13-205ENST00000484589 PUS7Q96PZ0 661 aaKnown RBP11.79□□□□□ -0.52
CDK13-205ENST00000484589 ATAD2Q6PL18 1390 aa11.79□□□□□ -0.52
CDK13-205ENST00000484589 PHF8Q9UPP1 1060 aa11.78□□□□□ -0.52
CDK13-205ENST00000484589 ACEP12821 1306 aa11.78□□□□□ -0.52
CDK13-205ENST00000484589 ANKARQ7Z5J8 1434 aa11.78□□□□□ -0.52
CDK13-205ENST00000484589 CD163L1Q9NR16 1453 aa11.78□□□□□ -0.52
CDK13-205ENST00000484589 TOPAZ1Q8N9V7 1692 aa11.78□□□□□ -0.52
CDK13-205ENST00000484589 PLEKHG3A1L390 1219 aa11.78□□□□□ -0.52
CDK13-205ENST00000484589 CARD14Q9BXL6 1004 aa11.78□□□□□ -0.52
CDK13-205ENST00000484589 PANK3Q9H999 370 aa11.78□□□□□ -0.52
CDK13-205ENST00000484589 A0A1W2PP64 1363 aa11.77□□□□□ -0.53
CDK13-205ENST00000484589 SCAF1Q9H7N4 1312 aaKnown RBP11.77□□□□□ -0.53
CDK13-205ENST00000484589 TOM1O60784 492 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms