RNA–Protein interactions for RNA: ENST00000483789.5

CCNL1-224, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 667 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-224ENST00000483789 KDM4AO75164 1064 aa9.02□□□□□ -0.97
CCNL1-224ENST00000483789 USP46P62068 366 aa9.02□□□□□ -0.97
CCNL1-224ENST00000483789 RNF19BQ6ZMZ0 732 aa9.02□□□□□ -0.97
CCNL1-224ENST00000483789 MMP16P51512 607 aa9.01□□□□□ -0.97
CCNL1-224ENST00000483789 TTC24A2A3L6 582 aaPredicted RBP9□□□□□ -0.97
CCNL1-224ENST00000483789 IRF6O14896 467 aa9□□□□□ -0.97
CCNL1-224ENST00000483789 AXIN1O15169 862 aa9□□□□□ -0.97
CCNL1-224ENST00000483789 SMCPP49901 116 aaPredicted RBP9□□□□□ -0.97
CCNL1-224ENST00000483789 USB1Q9BQ65 265 aaKnown RBP9□□□□□ -0.97
CCNL1-224ENST00000483789 MINK1Q8N4C8 1332 aaPredicted RBP9□□□□□ -0.97
CCNL1-224ENST00000483789 WNT7AO00755 349 aa8.99□□□□□ -0.97
CCNL1-224ENST00000483789 KDM2AQ9Y2K7 1162 aa8.98□□□□□ -0.97
CCNL1-224ENST00000483789 TRIM32Q13049 653 aa8.97□□□□□ -0.97
CCNL1-224ENST00000483789 SNIP1Q8TAD8 396 aaKnown RBP8.97□□□□□ -0.97
CCNL1-224ENST00000483789 REPIN1Q9BWE0 567 aaKnown RBP8.97□□□□□ -0.97
CCNL1-224ENST00000483789 DXOO77932 396 aaKnown RBP8.96□□□□□ -0.98
CCNL1-224ENST00000483789 MDM2Q00987 491 aaPredicted RBP8.96□□□□□ -0.98
CCNL1-224ENST00000483789 TREML4Q6UXN2 200 aa8.95□□□□□ -0.98
CCNL1-224ENST00000483789 C11orf95C9JLR9 678 aaPredicted RBP8.94□□□□□ -0.98
CCNL1-224ENST00000483789 CLCN1P35523 988 aa8.94□□□□□ -0.98
CCNL1-224ENST00000483789 VSIG10Q8N0Z9 540 aa8.94□□□□□ -0.98
CCNL1-224ENST00000483789 HOXA2O43364 376 aa8.93□□□□□ -0.98
CCNL1-224ENST00000483789 GPCPD1Q9NPB8 672 aa8.93□□□□□ -0.98
CCNL1-224ENST00000483789 DACH1Q9UI36 760 aa8.93□□□□□ -0.98
CCNL1-224ENST00000483789 CCDC24Q8N4L8 307 aa8.92□□□□□ -0.98
CCNL1-224ENST00000483789 KRI1Q8N9T8 703 aaKnown RBP8.92□□□□□ -0.98
CCNL1-224ENST00000483789 MRGPRX2Q96LB1 330 aa8.92□□□□□ -0.98
CCNL1-224ENST00000483789 GMPR2Q9P2T1 348 aaKnown RBP8.92□□□□□ -0.98
CCNL1-224ENST00000483789 SMPD1P17405 629 aa8.91□□□□□ -0.98
CCNL1-224ENST00000483789 WNT7BP56706 349 aa8.91□□□□□ -0.98
CCNL1-224ENST00000483789 CCDC102AQ96A19 550 aa8.91□□□□□ -0.98
CCNL1-224ENST00000483789 NUTM1Q86Y26 1132 aa8.89□□□□□ -0.99
CCNL1-224ENST00000483789 SENP2Q9HC62 589 aa8.89□□□□□ -0.99
CCNL1-224ENST00000483789 FAM217BQ9NTX9 383 aaPredicted RBP8.89□□□□□ -0.99
CCNL1-224ENST00000483789 JUNDP17535 347 aa8.88□□□□□ -0.99
CCNL1-224ENST00000483789 LCE2AQ5TA79 106 aaPredicted RBP8.88□□□□□ -0.99
CCNL1-224ENST00000483789 RC3H1Q5TC82 1133 aaKnown RBP8.88□□□□□ -0.99
CCNL1-224ENST00000483789 WFS1O76024 890 aa8.87□□□□□ -0.99
CCNL1-224ENST00000483789 RETREG3Q86VR2 466 aa8.87□□□□□ -0.99
CCNL1-224ENST00000483789 HLA-CQ95604 372 aa8.87□□□□□ -0.99
CCNL1-224ENST00000483789 ATP13A2Q9NQ11 1180 aa8.87□□□□□ -0.99
CCNL1-224ENST00000483789 J3QL48 77 aa8.86□□□□□ -0.99
CCNL1-224ENST00000483789 KIFC2Q96AC6 838 aa8.85□□□□□ -0.99
CCNL1-224ENST00000483789 GUCA2AQ02747 115 aa8.84□□□□□ -0.99
CCNL1-224ENST00000483789 NUDT12Q9BQG2 462 aa8.84□□□□□ -0.99
CCNL1-224ENST00000483789 SKOR1P84550 965 aa8.83□□□□□ -1
CCNL1-224ENST00000483789 TRIM47Q96LD4 638 aa8.83□□□□□ -1
CCNL1-224ENST00000483789 FDX1P10109 184 aa8.82□□□□□ -1
CCNL1-224ENST00000483789 HPS1Q92902 700 aa8.82□□□□□ -1
CCNL1-224ENST00000483789 C6orf229H3BNL8 230 aa8.81□□□□□ -1
CCNL1-224ENST00000483789 SYMPKQ92797 1274 aaKnown RBP8.81□□□□□ -1
CCNL1-224ENST00000483789 ALDH1A1P00352 501 aa8.8□□□□□ -1
CCNL1-224ENST00000483789 MS4A1P11836 297 aa8.8□□□□□ -1
CCNL1-224ENST00000483789 NFX1Q12986 1120 aaKnown RBP8.8□□□□□ -1
CCNL1-224ENST00000483789 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.8□□□□□ -1
CCNL1-224ENST00000483789 EHBP1Q8NDI1 1231 aa8.8□□□□□ -1
CCNL1-224ENST00000483789 CCNYL3P0C7X3 344 aa8.79□□□□□ -1
CCNL1-224ENST00000483789 SSTR3P32745 418 aaPredicted RBP8.79□□□□□ -1
CCNL1-224ENST00000483789 INSM1Q01101 510 aaPredicted RBP8.79□□□□□ -1
CCNL1-224ENST00000483789 WIPF1O43516 503 aa8.78□□□□□ -1
CCNL1-224ENST00000483789 SNRPBP14678 240 aaKnown RBP8.78□□□□□ -1
CCNL1-224ENST00000483789 SPDYE5A6NIY4 337 aa8.77□□□□□ -1.01
CCNL1-224ENST00000483789 SIAH2O43255 324 aa8.77□□□□□ -1.01
CCNL1-224ENST00000483789 PTPRNQ16849 979 aa8.77□□□□□ -1.01
CCNL1-224ENST00000483789 SPIRE2Q8WWL2 714 aa8.77□□□□□ -1.01
CCNL1-224ENST00000483789 PCDHGC3Q9UN70 934 aa8.77□□□□□ -1.01
CCNL1-224ENST00000483789 WASF2Q9Y6W5 498 aa8.77□□□□□ -1.01
CCNL1-224ENST00000483789 TERTO14746 1132 aaKnown RBP8.76□□□□□ -1.01
CCNL1-224ENST00000483789 TTLL12Q14166 644 aaPredicted RBP8.76□□□□□ -1.01
CCNL1-224ENST00000483789 PTCRAQ6ISU1 281 aaPredicted RBP8.76□□□□□ -1.01
CCNL1-224ENST00000483789 STK17AQ9UEE5 414 aa8.76□□□□□ -1.01
CCNL1-224ENST00000483789 DESI1Q6ICB0 168 aa8.75□□□□□ -1.01
CCNL1-224ENST00000483789 EVA1BQ9NVM1 165 aa8.75□□□□□ -1.01
CCNL1-224ENST00000483789 SH3BP2P78314 561 aa8.74□□□□□ -1.01
CCNL1-224ENST00000483789 DIXDC1Q155Q3 683 aa8.74□□□□□ -1.01
CCNL1-224ENST00000483789 AMHR2Q16671 573 aa8.74□□□□□ -1.01
CCNL1-224ENST00000483789 BARGINQ6ZT62 677 aa8.74□□□□□ -1.01
CCNL1-224ENST00000483789 CAPN5O15484 640 aaPredicted RBP8.73□□□□□ -1.01
CCNL1-224ENST00000483789 GJA5P36382 358 aa8.73□□□□□ -1.01
CCNL1-224ENST00000483789 MTMR2Q13614 643 aa8.73□□□□□ -1.01
CCNL1-224ENST00000483789 SLC16A10Q8TF71 515 aa8.73□□□□□ -1.01
CCNL1-224ENST00000483789 UNC93B1Q9H1C4 597 aa8.73□□□□□ -1.01
CCNL1-224ENST00000483789 PLEKHG3A1L390 1219 aa8.72□□□□□ -1.01
CCNL1-224ENST00000483789 MOXD2PA6NHM9 499 aa8.72□□□□□ -1.01
CCNL1-224ENST00000483789 KCNH2Q12809 1159 aa8.72□□□□□ -1.01
CCNL1-224ENST00000483789 PRR7Q8TB68 274 aa8.72□□□□□ -1.01
CCNL1-224ENST00000483789 ZMYND10O75800 440 aa8.71□□□□□ -1.02
CCNL1-224ENST00000483789 NDUFV2P19404 249 aa8.71□□□□□ -1.02
CCNL1-224ENST00000483789 VARSP26640 1264 aaKnown RBP8.71□□□□□ -1.02
CCNL1-224ENST00000483789 NPAS3Q8IXF0 933 aa8.7□□□□□ -1.02
CCNL1-224ENST00000483789 MPNDQ8N594 471 aa8.7□□□□□ -1.02
CCNL1-224ENST00000483789 GIGYF2Q6Y7W6 1299 aaKnown RBP8.69□□□□□ -1.02
CCNL1-224ENST00000483789 ZNF511Q8NB15 262 aa8.69□□□□□ -1.02
CCNL1-224ENST00000483789 BAP1Q92560 729 aa8.69□□□□□ -1.02
CCNL1-224ENST00000483789 BEGAINQ9BUH8 593 aa8.69□□□□□ -1.02
CCNL1-224ENST00000483789 NXF1Q9UBU9 619 aaKnown RBP8.69□□□□□ -1.02
CCNL1-224ENST00000483789 LINC01559Q495D7 138 aa8.67□□□□□ -1.02
CCNL1-224ENST00000483789 TRIM46Q7Z4K8 759 aa8.66□□□□□ -1.02
CCNL1-224ENST00000483789 ZC3H15Q8WU90 426 aaKnown RBP8.66□□□□□ -1.02
CCNL1-224ENST00000483789 TBC1D2Q9BYX2 928 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms